Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00753 and ECD_00754 are separated by 204 nucleotides ECD_00754 and ECD_00755 are separated by 35 nucleotides ECD_00755 and ECD_00756 overlap by 1 nucleotides
ECD_00753: ECD_00753 - putative acetate transporter; BAX Inhibitor-1 family inner membrane protein, at 803,876 to 804,580
_00753
ECD_00754: ECD_00754 - BAX Inhibitor-1 family inner membrane protein, at 804,785 to 805,498
_00754
ECD_00755: ECD_00755 - UPF0104 family inner membrane protein, at 805,534 to 806,490
_00755
ECD_00756: ECD_00756 - cardiolipin synthase 2, at 806,490 to 807,731
_00756
Position (kb) 805
806
807 Strain fitness (log2 ratio) -2
-1
0
1
2 at 804.907 kb on + strand, within ECD_00754 at 805.512 kb on + strand at 805.512 kb on + strand at 805.524 kb on + strand at 805.677 kb on + strand, within ECD_00755 at 805.678 kb on - strand, within ECD_00755 at 805.678 kb on - strand, within ECD_00755 at 805.678 kb on - strand, within ECD_00755 at 805.678 kb on - strand, within ECD_00755 at 805.678 kb on - strand, within ECD_00755 at 805.759 kb on - strand, within ECD_00755 at 805.793 kb on + strand, within ECD_00755 at 805.793 kb on + strand, within ECD_00755 at 805.996 kb on - strand, within ECD_00755 at 806.097 kb on + strand, within ECD_00755 at 806.097 kb on + strand, within ECD_00755 at 806.307 kb on - strand, within ECD_00755 at 806.403 kb on - strand at 806.814 kb on - strand, within ECD_00756 at 806.854 kb on - strand, within ECD_00756 at 806.915 kb on - strand, within ECD_00756 at 806.915 kb on - strand, within ECD_00756 at 806.918 kb on + strand, within ECD_00756 at 806.918 kb on + strand, within ECD_00756 at 806.918 kb on + strand, within ECD_00756 at 806.919 kb on - strand, within ECD_00756 at 806.919 kb on - strand, within ECD_00756 at 806.921 kb on - strand, within ECD_00756 at 806.921 kb on - strand, within ECD_00756 at 807.257 kb on + strand, within ECD_00756 at 807.326 kb on + strand, within ECD_00756 at 807.326 kb on + strand, within ECD_00756 at 807.327 kb on - strand, within ECD_00756 at 807.327 kb on - strand, within ECD_00756 at 807.452 kb on - strand, within ECD_00756
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 804,907 + ECD_00754 0.17 -0.5 805,512 + +0.3 805,512 + -1.4 805,524 + +0.7 805,677 + ECD_00755 0.15 -0.0 805,678 - ECD_00755 0.15 +0.5 805,678 - ECD_00755 0.15 +0.7 805,678 - ECD_00755 0.15 -0.8 805,678 - ECD_00755 0.15 -0.8 805,678 - ECD_00755 0.15 +0.3 805,759 - ECD_00755 0.24 +2.6 805,793 + ECD_00755 0.27 -1.0 805,793 + ECD_00755 0.27 -2.3 805,996 - ECD_00755 0.48 -1.8 806,097 + ECD_00755 0.59 -0.9 806,097 + ECD_00755 0.59 -2.1 806,307 - ECD_00755 0.81 +0.5 806,403 - +0.0 806,814 - ECD_00756 0.26 +0.4 806,854 - ECD_00756 0.29 -0.5 806,915 - ECD_00756 0.34 -0.8 806,915 - ECD_00756 0.34 +1.2 806,918 + ECD_00756 0.34 -0.5 806,918 + ECD_00756 0.34 -1.1 806,918 + ECD_00756 0.34 +0.0 806,919 - ECD_00756 0.35 +1.1 806,919 - ECD_00756 0.35 -0.3 806,921 - ECD_00756 0.35 -1.4 806,921 - ECD_00756 0.35 +0.9 807,257 + ECD_00756 0.62 -0.9 807,326 + ECD_00756 0.67 -0.6 807,326 + ECD_00756 0.67 -0.5 807,327 - ECD_00756 0.67 +0.0 807,327 - ECD_00756 0.67 -0.0 807,452 - ECD_00756 0.77 +0.3
Or see this region's nucleotide sequence