Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00750 and ECD_00751 overlap by 8 nucleotides ECD_00751 and ECD_00752 are separated by 1 nucleotides ECD_00752 and ECD_00753 are separated by 135 nucleotides ECD_00753 and ECD_00754 are separated by 204 nucleotides ECD_00754 and ECD_00755 are separated by 35 nucleotides
ECD_00750: ECD_00750 - molybdopterin biosynthesis, protein C, at 802,563 to 803,048
_00750
ECD_00751: ECD_00751 - molybdopterin synthase, small subunit, at 803,041 to 803,286
_00751
ECD_00752: ECD_00752 - molybdopterin synthase, large subunit, at 803,288 to 803,740
_00752
ECD_00753: ECD_00753 - putative acetate transporter; BAX Inhibitor-1 family inner membrane protein, at 803,876 to 804,580
_00753
ECD_00754: ECD_00754 - BAX Inhibitor-1 family inner membrane protein, at 804,785 to 805,498
_00754
ECD_00755: ECD_00755 - UPF0104 family inner membrane protein, at 805,534 to 806,490
_00755
Position (kb) 803
804
805 Strain fitness (log2 ratio) -1
0
1
2 at 802.941 kb on + strand, within ECD_00750 at 802.942 kb on - strand, within ECD_00750 at 803.284 kb on + strand at 803.627 kb on - strand, within ECD_00752 at 803.636 kb on + strand, within ECD_00752 at 803.636 kb on + strand, within ECD_00752 at 803.794 kb on - strand at 803.794 kb on - strand at 803.856 kb on + strand at 803.856 kb on + strand at 803.856 kb on + strand at 803.857 kb on - strand at 803.859 kb on - strand at 803.933 kb on + strand at 803.935 kb on + strand at 803.997 kb on - strand, within ECD_00753 at 804.075 kb on + strand, within ECD_00753 at 804.127 kb on - strand, within ECD_00753 at 804.183 kb on + strand, within ECD_00753 at 804.195 kb on - strand, within ECD_00753 at 804.209 kb on - strand, within ECD_00753 at 804.285 kb on + strand, within ECD_00753 at 804.907 kb on + strand, within ECD_00754 at 805.512 kb on + strand at 805.512 kb on + strand at 805.524 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 802,941 + ECD_00750 0.78 -0.3 802,942 - ECD_00750 0.78 +0.4 803,284 + -0.1 803,627 - ECD_00752 0.75 -0.7 803,636 + ECD_00752 0.77 +1.8 803,636 + ECD_00752 0.77 +1.2 803,794 - -1.0 803,794 - -1.1 803,856 + -0.4 803,856 + -0.5 803,856 + +0.9 803,857 - -1.3 803,859 - +0.9 803,933 + -0.3 803,935 + +0.1 803,997 - ECD_00753 0.17 -1.0 804,075 + ECD_00753 0.28 +0.4 804,127 - ECD_00753 0.36 +0.1 804,183 + ECD_00753 0.44 -0.2 804,195 - ECD_00753 0.45 -0.1 804,209 - ECD_00753 0.47 +0.6 804,285 + ECD_00753 0.58 -0.0 804,907 + ECD_00754 0.17 -0.5 805,512 + +0.3 805,512 + -1.4 805,524 + +0.7
Or see this region's nucleotide sequence