Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_20105

Experiment: m.b. Nalidixic 0.03 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_20100 and CA264_20105 are separated by 1 nucleotidesCA264_20105 and CA264_20110 are separated by 66 nucleotides CA264_20100: CA264_20100 - mannose-1-phosphate guanylyltransferase, at 4,633,928 to 4,635,004 _20100 CA264_20105: CA264_20105 - D-arabinose 5-phosphate isomerase, at 4,635,006 to 4,635,977 _20105 CA264_20110: CA264_20110 - DNA helicase RecQ, at 4,636,044 to 4,638,224 _20110 Position (kb) 4635 4636Strain fitness (log2 ratio) -1 0 1at 4636.041 kb on + strandat 4636.042 kb on - strandat 4636.042 kb on - strandat 4636.409 kb on + strand, within CA264_20110at 4636.720 kb on - strand, within CA264_20110

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml
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4,636,041 + -0.7
4,636,042 - +0.4
4,636,042 - +1.1
4,636,409 + CA264_20110 0.17 +1.2
4,636,720 - CA264_20110 0.31 +1.3

Or see this region's nucleotide sequence