Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17880 and CA264_17885 are separated by 251 nucleotides CA264_17885 and CA264_17890 are separated by 68 nucleotides CA264_17890 and CA264_17895 are separated by 148 nucleotides
CA264_17880: CA264_17880 - phosphatidylserine decarboxylase, at 4,157,596 to 4,158,279
_17880
CA264_17885: CA264_17885 - GAF domain-containing protein, at 4,158,531 to 4,159,013
_17885
CA264_17890: CA264_17890 - bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase, at 4,159,082 to 4,160,119
_17890
CA264_17895: CA264_17895 - protein-(glutamine-N5) methyltransferase, release factor-specific, at 4,160,268 to 4,161,122
_17895
Position (kb)
4159
4160
4161 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4158.277 kb on + strand at 4158.293 kb on - strand at 4158.293 kb on - strand at 4158.294 kb on + strand at 4158.294 kb on + strand at 4158.295 kb on - strand at 4158.300 kb on - strand at 4158.303 kb on + strand at 4158.303 kb on + strand at 4158.303 kb on + strand at 4158.304 kb on - strand at 4158.402 kb on - strand at 4158.499 kb on + strand at 4158.517 kb on - strand at 4158.520 kb on + strand at 4158.615 kb on + strand, within CA264_17885 at 4158.633 kb on + strand, within CA264_17885 at 4158.746 kb on + strand, within CA264_17885 at 4158.965 kb on - strand at 4158.993 kb on + strand at 4158.993 kb on + strand at 4158.994 kb on - strand at 4159.018 kb on + strand at 4159.019 kb on - strand at 4159.021 kb on + strand at 4159.051 kb on + strand at 4159.056 kb on - strand at 4159.056 kb on - strand at 4159.090 kb on + strand at 4159.091 kb on - strand at 4159.091 kb on - strand at 4159.093 kb on + strand at 4159.093 kb on + strand at 4159.094 kb on - strand at 4159.094 kb on - strand at 4160.120 kb on - strand at 4160.145 kb on + strand at 4160.145 kb on + strand at 4160.213 kb on + strand at 4160.216 kb on + strand at 4160.224 kb on + strand at 4160.224 kb on + strand at 4160.844 kb on + strand, within CA264_17895
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 4,158,277 + -0.1 4,158,293 - +0.5 4,158,293 - -2.0 4,158,294 + -0.1 4,158,294 + -0.6 4,158,295 - -0.1 4,158,300 - -1.4 4,158,303 + -0.6 4,158,303 + +0.0 4,158,303 + -1.0 4,158,304 - -0.9 4,158,402 - -1.9 4,158,499 + -1.2 4,158,517 - +1.2 4,158,520 + -1.6 4,158,615 + CA264_17885 0.17 +2.5 4,158,633 + CA264_17885 0.21 -0.9 4,158,746 + CA264_17885 0.45 +0.3 4,158,965 - -1.1 4,158,993 + -0.9 4,158,993 + -1.2 4,158,994 - -1.2 4,159,018 + -0.6 4,159,019 - -0.4 4,159,021 + +0.5 4,159,051 + -0.3 4,159,056 - -0.7 4,159,056 - -2.5 4,159,090 + -0.7 4,159,091 - +0.9 4,159,091 - +0.3 4,159,093 + -0.4 4,159,093 + -1.9 4,159,094 - -0.5 4,159,094 - -1.5 4,160,120 - +0.1 4,160,145 + +0.2 4,160,145 + -0.6 4,160,213 + -1.9 4,160,216 + -1.5 4,160,224 + -1.0 4,160,224 + -1.5 4,160,844 + CA264_17895 0.67 -0.5
Or see this region's nucleotide sequence