Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15065 and CA264_15070 are separated by 107 nucleotides CA264_15070 and CA264_15075 are separated by 72 nucleotides
CA264_15065: CA264_15065 - formiminoglutamase, at 3,538,033 to 3,539,199
_15065
CA264_15070: CA264_15070 - cytochrome b5, at 3,539,307 to 3,539,567
_15070
CA264_15075: CA264_15075 - hypothetical protein, at 3,539,640 to 3,540,506
_15075
Position (kb)
3539
3540 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3538.342 kb on + strand, within CA264_15065 at 3538.427 kb on - strand, within CA264_15065 at 3538.724 kb on + strand, within CA264_15065 at 3538.865 kb on - strand, within CA264_15065 at 3538.871 kb on - strand, within CA264_15065 at 3539.284 kb on + strand at 3539.285 kb on - strand at 3539.302 kb on - strand at 3539.302 kb on - strand at 3539.382 kb on + strand, within CA264_15070 at 3539.397 kb on + strand, within CA264_15070 at 3539.398 kb on - strand, within CA264_15070 at 3539.398 kb on - strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.404 kb on + strand, within CA264_15070 at 3539.405 kb on - strand, within CA264_15070 at 3539.405 kb on - strand, within CA264_15070 at 3539.405 kb on - strand, within CA264_15070 at 3539.477 kb on - strand, within CA264_15070 at 3539.565 kb on + strand at 3539.566 kb on - strand at 3539.589 kb on + strand at 3539.590 kb on - strand at 3539.590 kb on - strand at 3539.601 kb on - strand at 3539.618 kb on + strand at 3539.628 kb on + strand at 3539.628 kb on + strand at 3539.632 kb on + strand at 3539.632 kb on + strand at 3539.632 kb on + strand at 3539.633 kb on - strand at 3539.634 kb on + strand at 3539.634 kb on + strand at 3539.635 kb on - strand at 3539.635 kb on - strand at 3539.648 kb on - strand at 3540.481 kb on + strand at 3540.500 kb on + strand at 3540.500 kb on + strand at 3540.501 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 3,538,342 + CA264_15065 0.26 -0.3 3,538,427 - CA264_15065 0.34 +0.5 3,538,724 + CA264_15065 0.59 +0.3 3,538,865 - CA264_15065 0.71 -1.0 3,538,871 - CA264_15065 0.72 -2.5 3,539,284 + +1.3 3,539,285 - -1.8 3,539,302 - -0.9 3,539,302 - -1.2 3,539,382 + CA264_15070 0.29 +2.3 3,539,397 + CA264_15070 0.34 -0.0 3,539,398 - CA264_15070 0.35 +0.2 3,539,398 - CA264_15070 0.35 -1.3 3,539,404 + CA264_15070 0.37 +0.7 3,539,404 + CA264_15070 0.37 -0.7 3,539,404 + CA264_15070 0.37 -0.2 3,539,404 + CA264_15070 0.37 -0.3 3,539,405 - CA264_15070 0.38 +0.7 3,539,405 - CA264_15070 0.38 -0.2 3,539,405 - CA264_15070 0.38 -2.3 3,539,477 - CA264_15070 0.65 -0.2 3,539,565 + +1.3 3,539,566 - +0.1 3,539,589 + -0.6 3,539,590 - -0.4 3,539,590 - -1.0 3,539,601 - -1.0 3,539,618 + +0.7 3,539,628 + -0.6 3,539,628 + -0.1 3,539,632 + +0.5 3,539,632 + -0.7 3,539,632 + -0.3 3,539,633 - +0.5 3,539,634 + -0.7 3,539,634 + -0.5 3,539,635 - -2.4 3,539,635 - +0.3 3,539,648 - -1.0 3,540,481 + -0.6 3,540,500 + -1.3 3,540,500 + -1.4 3,540,501 - -0.2
Or see this region's nucleotide sequence