Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_12125

Experiment: m.b. Nalidixic 0.03 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_12120 and CA264_12125 are separated by 248 nucleotidesCA264_12125 and CA264_12130 are separated by 35 nucleotides CA264_12120: CA264_12120 - glycosyltransferase, at 2,826,215 to 2,827,357 _12120 CA264_12125: CA264_12125 - glycosyl transferase family 1, at 2,827,606 to 2,828,676 _12125 CA264_12130: CA264_12130 - oxidoreductase, at 2,828,712 to 2,829,758 _12130 Position (kb) 2827 2828 2829Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2826.622 kb on + strand, within CA264_12120at 2826.897 kb on - strand, within CA264_12120at 2827.013 kb on - strand, within CA264_12120at 2827.014 kb on + strand, within CA264_12120at 2827.015 kb on - strand, within CA264_12120at 2827.242 kb on + strand, within CA264_12120at 2827.330 kb on + strandat 2827.330 kb on + strandat 2827.358 kb on - strandat 2827.397 kb on - strandat 2827.509 kb on + strandat 2827.790 kb on + strand, within CA264_12125at 2827.790 kb on + strand, within CA264_12125at 2827.790 kb on + strand, within CA264_12125at 2827.895 kb on + strand, within CA264_12125at 2827.895 kb on + strand, within CA264_12125at 2828.033 kb on + strand, within CA264_12125at 2828.033 kb on + strand, within CA264_12125at 2828.035 kb on + strand, within CA264_12125at 2828.168 kb on + strand, within CA264_12125at 2828.198 kb on + strand, within CA264_12125at 2828.286 kb on - strand, within CA264_12125at 2828.286 kb on - strand, within CA264_12125at 2828.428 kb on + strand, within CA264_12125at 2828.507 kb on + strand, within CA264_12125at 2828.626 kb on + strandat 2828.707 kb on - strandat 2828.707 kb on - strandat 2828.745 kb on + strandat 2829.000 kb on + strand, within CA264_12130at 2829.001 kb on - strand, within CA264_12130at 2829.046 kb on + strand, within CA264_12130at 2829.071 kb on + strand, within CA264_12130at 2829.075 kb on - strand, within CA264_12130at 2829.262 kb on + strand, within CA264_12130at 2829.262 kb on + strand, within CA264_12130at 2829.298 kb on + strand, within CA264_12130at 2829.299 kb on - strand, within CA264_12130at 2829.607 kb on + strand, within CA264_12130at 2829.669 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml
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2,826,622 + CA264_12120 0.36 -0.2
2,826,897 - CA264_12120 0.60 -1.3
2,827,013 - CA264_12120 0.70 -1.4
2,827,014 + CA264_12120 0.70 +1.1
2,827,015 - CA264_12120 0.70 -1.2
2,827,242 + CA264_12120 0.90 +0.9
2,827,330 + -0.9
2,827,330 + +0.8
2,827,358 - -0.2
2,827,397 - +0.8
2,827,509 + -0.2
2,827,790 + CA264_12125 0.17 -0.2
2,827,790 + CA264_12125 0.17 -1.0
2,827,790 + CA264_12125 0.17 -0.9
2,827,895 + CA264_12125 0.27 +0.6
2,827,895 + CA264_12125 0.27 -0.9
2,828,033 + CA264_12125 0.40 +2.0
2,828,033 + CA264_12125 0.40 -0.8
2,828,035 + CA264_12125 0.40 -1.3
2,828,168 + CA264_12125 0.52 +0.4
2,828,198 + CA264_12125 0.55 -2.3
2,828,286 - CA264_12125 0.63 -1.3
2,828,286 - CA264_12125 0.63 -0.6
2,828,428 + CA264_12125 0.77 -0.8
2,828,507 + CA264_12125 0.84 -0.6
2,828,626 + -0.6
2,828,707 - -0.1
2,828,707 - -0.2
2,828,745 + -0.8
2,829,000 + CA264_12130 0.28 +3.4
2,829,001 - CA264_12130 0.28 -0.6
2,829,046 + CA264_12130 0.32 +0.4
2,829,071 + CA264_12130 0.34 -0.7
2,829,075 - CA264_12130 0.35 -0.4
2,829,262 + CA264_12130 0.53 -1.8
2,829,262 + CA264_12130 0.53 +1.4
2,829,298 + CA264_12130 0.56 -2.4
2,829,299 - CA264_12130 0.56 -1.0
2,829,607 + CA264_12130 0.85 -0.6
2,829,669 + +1.0

Or see this region's nucleotide sequence