Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10525

Experiment: m.b. Nalidixic 0.03 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_10515 and CA264_10520 are separated by 12 nucleotidesCA264_10520 and CA264_10525 are separated by 12 nucleotidesCA264_10525 and CA264_10530 are separated by 319 nucleotides CA264_10515: CA264_10515 - anion permease, at 2,438,343 to 2,439,101 _10515 CA264_10520: CA264_10520 - molybdopterin synthase sulfur carrier subunit, at 2,439,114 to 2,439,356 _10520 CA264_10525: CA264_10525 - molybdenum cofactor biosynthesis protein MoaE, at 2,439,369 to 2,439,785 _10525 CA264_10530: CA264_10530 - hypothetical protein, at 2,440,105 to 2,440,842 _10530 Position (kb) 2439 2440Strain fitness (log2 ratio) -2 -1 0 1 2at 2438.467 kb on + strand, within CA264_10515at 2438.656 kb on + strand, within CA264_10515at 2438.657 kb on - strand, within CA264_10515at 2438.659 kb on + strand, within CA264_10515at 2438.694 kb on + strand, within CA264_10515at 2438.737 kb on - strand, within CA264_10515at 2438.737 kb on - strand, within CA264_10515at 2438.879 kb on + strand, within CA264_10515at 2438.887 kb on + strand, within CA264_10515at 2438.888 kb on - strand, within CA264_10515at 2438.888 kb on - strand, within CA264_10515at 2438.938 kb on + strand, within CA264_10515at 2439.014 kb on + strand, within CA264_10515at 2439.073 kb on + strandat 2439.073 kb on + strandat 2439.085 kb on - strandat 2439.121 kb on + strandat 2439.121 kb on + strandat 2439.235 kb on - strand, within CA264_10520at 2439.263 kb on + strand, within CA264_10520at 2439.285 kb on + strand, within CA264_10520at 2439.344 kb on - strandat 2439.370 kb on - strandat 2439.373 kb on + strandat 2439.374 kb on - strandat 2439.378 kb on - strandat 2439.378 kb on - strandat 2439.379 kb on + strandat 2439.379 kb on + strandat 2439.380 kb on - strandat 2439.380 kb on - strandat 2439.523 kb on - strand, within CA264_10525at 2439.523 kb on - strand, within CA264_10525at 2439.794 kb on + strandat 2439.795 kb on - strandat 2439.795 kb on - strandat 2439.795 kb on - strandat 2439.795 kb on - strandat 2439.878 kb on + strandat 2439.883 kb on + strandat 2439.920 kb on - strandat 2440.037 kb on + strandat 2440.038 kb on - strandat 2440.151 kb on - strandat 2440.290 kb on - strand, within CA264_10530at 2440.357 kb on - strand, within CA264_10530at 2440.524 kb on + strand, within CA264_10530at 2440.526 kb on + strand, within CA264_10530at 2440.526 kb on + strand, within CA264_10530at 2440.570 kb on - strand, within CA264_10530at 2440.570 kb on - strand, within CA264_10530

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml
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2,438,467 + CA264_10515 0.16 -1.8
2,438,656 + CA264_10515 0.41 -2.1
2,438,657 - CA264_10515 0.41 -1.5
2,438,659 + CA264_10515 0.42 +0.6
2,438,694 + CA264_10515 0.46 +0.6
2,438,737 - CA264_10515 0.52 +2.6
2,438,737 - CA264_10515 0.52 -0.5
2,438,879 + CA264_10515 0.71 +0.3
2,438,887 + CA264_10515 0.72 -0.1
2,438,888 - CA264_10515 0.72 -0.7
2,438,888 - CA264_10515 0.72 +0.0
2,438,938 + CA264_10515 0.78 -0.1
2,439,014 + CA264_10515 0.88 +0.0
2,439,073 + -0.8
2,439,073 + +1.6
2,439,085 - +0.0
2,439,121 + -0.2
2,439,121 + +0.1
2,439,235 - CA264_10520 0.50 -1.6
2,439,263 + CA264_10520 0.61 -1.0
2,439,285 + CA264_10520 0.70 +1.0
2,439,344 - -0.3
2,439,370 - -1.9
2,439,373 + -0.2
2,439,374 - +0.6
2,439,378 - +2.6
2,439,378 - -1.0
2,439,379 + +2.6
2,439,379 + -1.0
2,439,380 - +0.6
2,439,380 - -1.3
2,439,523 - CA264_10525 0.37 +1.0
2,439,523 - CA264_10525 0.37 -2.4
2,439,794 + -1.4
2,439,795 - +1.0
2,439,795 - -1.0
2,439,795 - -1.4
2,439,795 - -1.2
2,439,878 + +0.3
2,439,883 + -2.1
2,439,920 - +0.7
2,440,037 + -1.4
2,440,038 - -1.2
2,440,151 - +1.8
2,440,290 - CA264_10530 0.25 +2.6
2,440,357 - CA264_10530 0.34 -2.2
2,440,524 + CA264_10530 0.57 -2.2
2,440,526 + CA264_10530 0.57 +0.0
2,440,526 + CA264_10530 0.57 +0.7
2,440,570 - CA264_10530 0.63 +1.6
2,440,570 - CA264_10530 0.63 -1.5

Or see this region's nucleotide sequence