Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07790 and CA264_07795 are separated by 309 nucleotides CA264_07795 and CA264_07800 are separated by 173 nucleotides CA264_07800 and CA264_07805 are separated by 3 nucleotides
CA264_07790: CA264_07790 - ankryin, at 1,802,651 to 1,804,297
_07790
CA264_07795: CA264_07795 - ATP-dependent DNA helicase, at 1,804,607 to 1,806,844
_07795
CA264_07800: CA264_07800 - hypothetical protein, at 1,807,018 to 1,807,677
_07800
CA264_07805: CA264_07805 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 1,807,681 to 1,808,985
_07805
Position (kb)
1804
1805
1806
1807 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1803.627 kb on + strand, within CA264_07790 at 1803.672 kb on + strand, within CA264_07790 at 1803.672 kb on + strand, within CA264_07790 at 1803.672 kb on + strand, within CA264_07790 at 1803.675 kb on + strand, within CA264_07790 at 1803.675 kb on + strand, within CA264_07790 at 1803.675 kb on + strand, within CA264_07790 at 1803.675 kb on + strand, within CA264_07790 at 1803.676 kb on - strand, within CA264_07790 at 1803.676 kb on - strand, within CA264_07790 at 1803.676 kb on - strand, within CA264_07790 at 1803.676 kb on - strand, within CA264_07790 at 1803.676 kb on - strand, within CA264_07790 at 1803.855 kb on + strand, within CA264_07790 at 1803.856 kb on - strand, within CA264_07790 at 1803.856 kb on - strand, within CA264_07790 at 1803.926 kb on + strand, within CA264_07790 at 1803.943 kb on - strand, within CA264_07790 at 1803.985 kb on - strand, within CA264_07790 at 1804.054 kb on + strand, within CA264_07790 at 1804.055 kb on - strand, within CA264_07790 at 1804.059 kb on + strand, within CA264_07790 at 1804.059 kb on + strand, within CA264_07790 at 1804.059 kb on + strand, within CA264_07790 at 1804.059 kb on + strand, within CA264_07790 at 1804.060 kb on - strand, within CA264_07790 at 1804.062 kb on + strand, within CA264_07790 at 1804.062 kb on + strand, within CA264_07790 at 1804.062 kb on + strand, within CA264_07790 at 1804.062 kb on + strand, within CA264_07790 at 1804.062 kb on + strand, within CA264_07790 at 1804.063 kb on - strand, within CA264_07790 at 1804.063 kb on - strand, within CA264_07790 at 1804.063 kb on - strand, within CA264_07790 at 1804.321 kb on + strand at 1804.323 kb on + strand at 1804.324 kb on - strand at 1804.345 kb on + strand at 1804.345 kb on + strand at 1804.428 kb on + strand at 1804.429 kb on - strand at 1804.433 kb on + strand at 1804.440 kb on + strand at 1804.442 kb on + strand at 1804.443 kb on - strand at 1804.618 kb on - strand at 1804.618 kb on - strand at 1806.834 kb on + strand at 1806.843 kb on - strand at 1806.854 kb on - strand at 1806.867 kb on + strand at 1806.875 kb on - strand at 1806.909 kb on + strand at 1806.910 kb on - strand at 1806.910 kb on - strand at 1806.958 kb on - strand at 1806.959 kb on + strand at 1806.960 kb on - strand at 1806.971 kb on - strand at 1807.026 kb on + strand at 1807.026 kb on + strand at 1807.026 kb on + strand at 1807.026 kb on + strand at 1807.027 kb on - strand at 1807.027 kb on - strand at 1807.038 kb on + strand at 1807.064 kb on - strand at 1807.093 kb on + strand, within CA264_07800 at 1807.093 kb on + strand, within CA264_07800 at 1807.093 kb on + strand, within CA264_07800 at 1807.095 kb on + strand, within CA264_07800 at 1807.283 kb on - strand, within CA264_07800 at 1807.283 kb on - strand, within CA264_07800 at 1807.336 kb on - strand, within CA264_07800 at 1807.448 kb on - strand, within CA264_07800 at 1807.473 kb on + strand, within CA264_07800 at 1807.540 kb on + strand, within CA264_07800 at 1807.540 kb on + strand, within CA264_07800 at 1807.541 kb on - strand, within CA264_07800
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 1,803,627 + CA264_07790 0.59 -0.5 1,803,672 + CA264_07790 0.62 -0.6 1,803,672 + CA264_07790 0.62 -1.4 1,803,672 + CA264_07790 0.62 +1.9 1,803,675 + CA264_07790 0.62 +1.3 1,803,675 + CA264_07790 0.62 +2.4 1,803,675 + CA264_07790 0.62 -1.7 1,803,675 + CA264_07790 0.62 -0.9 1,803,676 - CA264_07790 0.62 -2.0 1,803,676 - CA264_07790 0.62 -0.4 1,803,676 - CA264_07790 0.62 -0.0 1,803,676 - CA264_07790 0.62 -0.7 1,803,676 - CA264_07790 0.62 +0.3 1,803,855 + CA264_07790 0.73 -0.1 1,803,856 - CA264_07790 0.73 -1.0 1,803,856 - CA264_07790 0.73 +0.0 1,803,926 + CA264_07790 0.77 +0.3 1,803,943 - CA264_07790 0.78 +1.3 1,803,985 - CA264_07790 0.81 +0.7 1,804,054 + CA264_07790 0.85 -2.1 1,804,055 - CA264_07790 0.85 +0.2 1,804,059 + CA264_07790 0.85 +0.2 1,804,059 + CA264_07790 0.85 +1.9 1,804,059 + CA264_07790 0.85 -0.6 1,804,059 + CA264_07790 0.85 -1.5 1,804,060 - CA264_07790 0.86 -0.3 1,804,062 + CA264_07790 0.86 -0.5 1,804,062 + CA264_07790 0.86 -1.0 1,804,062 + CA264_07790 0.86 -1.9 1,804,062 + CA264_07790 0.86 -0.6 1,804,062 + CA264_07790 0.86 +0.7 1,804,063 - CA264_07790 0.86 -0.3 1,804,063 - CA264_07790 0.86 -1.1 1,804,063 - CA264_07790 0.86 -0.7 1,804,321 + -0.8 1,804,323 + -0.7 1,804,324 - -0.2 1,804,345 + -1.1 1,804,345 + +0.0 1,804,428 + +1.3 1,804,429 - -1.1 1,804,433 + +1.9 1,804,440 + -0.6 1,804,442 + -1.0 1,804,443 - +0.5 1,804,618 - +0.5 1,804,618 - -0.8 1,806,834 + -1.4 1,806,843 - -1.9 1,806,854 - -2.7 1,806,867 + -1.1 1,806,875 - -0.8 1,806,909 + +2.9 1,806,910 - -1.1 1,806,910 - -2.4 1,806,958 - -2.1 1,806,959 + -0.3 1,806,960 - -0.5 1,806,971 - +1.3 1,807,026 + -2.0 1,807,026 + -0.6 1,807,026 + -2.6 1,807,026 + +0.2 1,807,027 - -2.0 1,807,027 - -0.8 1,807,038 + +0.5 1,807,064 - -1.5 1,807,093 + CA264_07800 0.11 +0.3 1,807,093 + CA264_07800 0.11 +2.9 1,807,093 + CA264_07800 0.11 -1.0 1,807,095 + CA264_07800 0.12 -1.4 1,807,283 - CA264_07800 0.40 +1.5 1,807,283 - CA264_07800 0.40 -1.1 1,807,336 - CA264_07800 0.48 +1.3 1,807,448 - CA264_07800 0.65 -0.5 1,807,473 + CA264_07800 0.69 -1.4 1,807,540 + CA264_07800 0.79 -0.7 1,807,540 + CA264_07800 0.79 -0.5 1,807,541 - CA264_07800 0.79 -2.0
Or see this region's nucleotide sequence