Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05835

Experiment: m.b. Nalidixic 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.03 mg/ml
1,358,211	+		CA264_05825	0.88	+1.1
1,358,211	+		CA264_05825	0.88	+0.3
1,358,301	+				-2.2
1,358,301	+				+1.3
1,358,432	-				-1.5
1,358,462	-				-1.2
1,358,462	-				-1.9
1,358,462	-				+0.8
1,358,467	-				-1.9
1,358,481	-				-1.7
1,358,515	-				-0.0
1,358,634	+		CA264_05830	0.37	+0.8
1,358,634	+		CA264_05830	0.37	+2.8
1,358,635	-		CA264_05830	0.38	-2.4
1,358,731	+		CA264_05830	0.63	+1.3
1,358,833	+				+0.3
1,358,869	+				-0.2
1,358,870	-				+0.8
1,358,870	-				-1.0
1,358,876	+				+0.5
1,358,890	+				-1.8
1,358,891	-				-1.5
1,358,891	-				+0.3
1,358,891	-				-2.6
1,358,894	+				-1.0
1,358,894	+				-0.0
1,358,895	-				-1.7
1,358,981	+				-0.2
1,358,981	+				-0.7
1,358,981	+				-2.6
1,358,981	+				+1.8
1,358,982	-				-2.0
1,358,982	-				+1.0
1,358,982	-				-0.6
1,358,982	-				-1.7
1,359,109	+				-0.7
1,359,209	+		CA264_05835	0.25	+1.5
1,359,210	-		CA264_05835	0.25	-1.6
1,359,211	+		CA264_05835	0.25	+1.3
1,359,211	+		CA264_05835	0.25	-0.1
1,359,222	+		CA264_05835	0.27	+1.3
1,359,223	-		CA264_05835	0.27	-0.3
1,359,296	+		CA264_05835	0.39	+1.9
1,359,401	+		CA264_05835	0.56	-2.4
1,359,521	+		CA264_05835	0.75	+2.9
1,359,626	+				-0.7
1,359,662	+				+0.9
1,359,664	+				-0.8
1,359,664	+				+1.3
1,359,707	-				-0.4
1,359,758	+				-0.5
1,359,812	-		CA264_05840	0.20	-0.3
1,359,907	+		CA264_05840	0.41	+1.3
1,359,916	-		CA264_05840	0.43	+0.0
1,359,977	-		CA264_05840	0.57	+0.2
1,359,979	+		CA264_05840	0.57	-0.6
1,359,979	+		CA264_05840	0.57	-1.3
1,359,980	-		CA264_05840	0.57	+1.9
1,359,980	-		CA264_05840	0.57	+0.6
1,359,983	-		CA264_05840	0.58	+1.7
1,360,056	+		CA264_05840	0.74	-1.0
1,360,119	+		CA264_05840	0.89	-1.1
1,360,120	-		CA264_05840	0.89	+0.0
1,360,120	-		CA264_05840	0.89	-0.8
1,360,120	-		CA264_05840	0.89	-0.3
1,360,148	+				-1.5
1,360,263	-				-0.3
1,360,263	-				+0.0
1,360,348	+				+1.3
1,360,354	+				+1.3
1,360,357	+				+0.5
1,360,357	+				-0.5
1,360,361	+				+0.2
1,360,497	-				-0.3
1,360,497	-				-1.7
1,360,500	-				-1.0
1,360,507	+				-1.4
1,360,507	+				+0.0
1,360,508	-				+0.3
1,360,508	-				-0.6
1,360,512	-				+0.0
1,360,527	-				-0.5
1,360,539	-				+0.5
1,360,539	-				+0.5
1,360,539	-				-0.1
1,360,544	+				-0.9