Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_04435

Experiment: m.b. Nalidixic 0.03 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.03 mg/ml
1,024,978	-		CA264_04430	0.54	+1.2
1,025,017	-		CA264_04430	0.57	+2.8
1,025,017	-		CA264_04430	0.57	+1.2
1,025,027	+		CA264_04430	0.57	-1.5
1,025,065	-		CA264_04430	0.59	-1.0
1,025,068	+		CA264_04430	0.60	-1.4
1,025,068	+		CA264_04430	0.60	+0.8
1,025,069	-		CA264_04430	0.60	-0.7
1,025,069	-		CA264_04430	0.60	+1.1
1,025,069	-		CA264_04430	0.60	-0.9
1,025,080	-		CA264_04430	0.60	+0.8
1,025,080	-		CA264_04430	0.60	+0.1
1,025,135	+		CA264_04430	0.64	-0.2
1,025,153	+		CA264_04430	0.65	-1.1
1,025,153	+		CA264_04430	0.65	-1.2
1,025,154	-		CA264_04430	0.65	+1.8
1,025,158	-		CA264_04430	0.65	-1.4
1,025,158	-		CA264_04430	0.65	-1.9
1,025,179	-		CA264_04430	0.66	+1.8
1,025,185	+		CA264_04430	0.67	+0.3
1,025,185	+		CA264_04430	0.67	-1.2
1,025,302	+		CA264_04430	0.74	+1.2
1,025,352	+		CA264_04430	0.77	+0.5
1,025,364	-		CA264_04430	0.78	+1.8
1,025,373	-				+2.8
1,025,373	-		CA264_04430	0.78	-2.6
1,025,373	-		CA264_04430	0.78	-2.4
1,025,373	-		CA264_04430	0.78	+0.2
1,025,446	+		CA264_04430	0.83	-1.1
1,025,460	-		CA264_04430	0.84	-0.6
1,025,500	+		CA264_04430	0.86	-1.1
1,025,587	+				-2.9
1,025,588	-				-1.4
1,025,588	-				+0.8
1,025,590	-				+1.0
1,025,597	+				-0.7
1,025,597	+				-0.8
1,025,598	-				+1.1
1,025,598	-				-0.8
1,025,598	-				-1.7
1,025,605	-				-3.3
1,025,605	-				-0.1
1,025,605	-				+1.2
1,025,605	-				-1.4
1,025,605	-				+3.4
1,025,745	-				+1.3
1,025,752	-				+0.2
1,025,754	-				+0.2
1,025,762	-				-1.2
1,025,762	-				-0.5
1,025,762	-				-1.5
1,025,764	+				+1.8
1,025,765	-				+0.4
1,025,767	+				-1.0
1,025,767	+				+0.2
1,025,768	-				-1.2
1,025,795	-				-0.6
1,025,797	+				-0.9
1,025,843	+				+2.8
1,025,844	-				-1.4
1,025,898	+				+0.7
1,025,899	-				-0.0
1,025,903	-				-0.5
1,025,903	-				-0.5
1,025,984	-				-1.8
1,025,984	-				+1.2
1,025,991	-				-0.7
1,025,995	-				+0.8
1,026,045	-				+0.0
1,026,075	-				-0.2
1,026,075	-				+0.6
1,026,148	-		CA264_04435	0.14	+2.2
1,026,159	-		CA264_04435	0.14	+0.2
1,026,216	-		CA264_04435	0.19	-1.0
1,026,266	+		CA264_04435	0.23	+0.2
1,026,266	+		CA264_04435	0.23	+2.0
1,026,267	-		CA264_04435	0.23	-1.7
1,026,267	-		CA264_04435	0.23	-1.0
1,026,267	-		CA264_04435	0.23	+0.0
1,026,281	+		CA264_04435	0.24	-1.9
1,026,281	+		CA264_04435	0.24	-1.3
1,026,336	+		CA264_04435	0.28	+0.0
1,026,336	+		CA264_04435	0.28	-0.5
1,026,337	-		CA264_04435	0.29	-0.4
1,026,340	+		CA264_04435	0.29	-0.4
1,026,340	+		CA264_04435	0.29	+0.8
1,026,341	-		CA264_04435	0.29	+0.8
1,026,341	-		CA264_04435	0.29	+0.5
1,026,341	-		CA264_04435	0.29	-1.2
1,026,459	+		CA264_04435	0.38	-0.3
1,026,481	+		CA264_04435	0.40	-0.7
1,026,482	-		CA264_04435	0.40	+0.8
1,026,482	-		CA264_04435	0.40	+0.2
1,026,490	+		CA264_04435	0.41	-0.7
1,026,528	+		CA264_04435	0.44	+0.5
1,026,529	-		CA264_04435	0.44	+0.8
1,026,547	-		CA264_04435	0.45	-0.7
1,026,547	-		CA264_04435	0.45	-1.7
1,026,710	+		CA264_04435	0.58	+1.8
1,026,710	+		CA264_04435	0.58	-1.1
1,026,711	-		CA264_04435	0.58	-0.9
1,026,711	-		CA264_04435	0.58	+0.1
1,026,711	-		CA264_04435	0.58	+2.8
1,026,714	+		CA264_04435	0.59	+0.0
1,026,714	+		CA264_04435	0.59	-1.6
1,026,714	+		CA264_04435	0.59	-2.0
1,026,727	+		CA264_04435	0.60	-2.0
1,026,727	+		CA264_04435	0.60	+0.0
1,026,727	+		CA264_04435	0.60	-0.4
1,026,808	-		CA264_04435	0.66	-2.4
1,026,808	-		CA264_04435	0.66	+2.8
1,026,811	+		CA264_04435	0.66	-1.6
1,026,811	+		CA264_04435	0.66	-0.1
1,026,814	-		CA264_04435	0.67	+1.5
1,026,814	-		CA264_04435	0.67	-0.4
1,026,857	+		CA264_04435	0.70	-1.1
1,026,857	+		CA264_04435	0.70	+0.0
1,026,857	+		CA264_04435	0.70	+0.3
1,026,857	+		CA264_04435	0.70	-1.4
1,026,858	-		CA264_04435	0.70	+0.5
1,026,858	-		CA264_04435	0.70	+1.2
1,026,866	+		CA264_04435	0.71	-2.3
1,026,866	+		CA264_04435	0.71	-1.5
1,026,867	-		CA264_04435	0.71	-0.9
1,026,867	-		CA264_04435	0.71	-0.2
1,027,002	-		CA264_04435	0.81	+0.2
1,027,002	-		CA264_04435	0.81	-2.8
1,027,008	-		CA264_04435	0.82	-0.9
1,027,008	-		CA264_04435	0.82	-1.4
1,027,103	+		CA264_04435	0.89	+1.8
1,027,104	-		CA264_04435	0.90	-1.9
1,027,104	-		CA264_04435	0.90	-0.1
1,027,104	-		CA264_04435	0.90	-0.4
1,027,104	-		CA264_04435	0.90	-0.7
1,027,113	+				+1.2
1,027,147	+				+2.8
1,027,196	+				-1.0
1,027,196	+				-0.9
1,027,261	+				-1.2
1,027,262	-				+0.2
1,027,262	-				-1.0
1,027,281	+				+1.6
1,027,317	+				+0.2
1,027,318	-				-0.4
1,027,337	+				+0.2
1,027,338	-				+1.8
1,027,422	+				+1.2
1,027,467	+				-0.3
1,027,552	+		CA264_04440	0.14	+0.2
1,027,553	-		CA264_04440	0.15	+0.3
1,027,553	-		CA264_04440	0.15	-1.1
1,027,572	+		CA264_04440	0.20	-0.4
1,027,572	+		CA264_04440	0.20	+0.8
1,027,578	-		CA264_04440	0.22	-1.3
1,027,601	+		CA264_04440	0.28	-2.1
1,027,658	+		CA264_04440	0.43	-1.3
1,027,658	+		CA264_04440	0.43	-0.4
1,027,745	+		CA264_04440	0.67	+0.5
1,027,745	+		CA264_04440	0.67	+0.2
1,027,746	-		CA264_04440	0.67	+0.3
1,027,746	-		CA264_04440	0.67	-0.2
1,027,746	-		CA264_04440	0.67	-1.7
1,027,746	-		CA264_04440	0.67	-1.2
1,027,756	-		CA264_04440	0.70	-1.4
1,027,770	-		CA264_04440	0.74	+1.8
1,027,770	-		CA264_04440	0.74	+0.8
1,027,847	+				-0.4
1,027,848	-				-0.6
1,027,898	-				-0.4
1,027,900	-				-3.1
1,027,912	-				-1.8
1,027,916	-				-0.5
1,027,917	+				-1.2
1,027,919	+				+0.5
1,027,943	+				-1.8
1,028,083	+				-0.1
1,028,084	-				-2.2
1,028,087	-				-2.4
1,028,087	-				+0.1
1,028,094	+				-1.8
1,028,111	-				-1.4
1,028,152	+				-0.3
1,028,153	-				-1.0
1,028,194	-				-0.9
1,028,203	-				+0.3
1,028,218	+				-0.4
1,028,219	-				-2.1