Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03295 and CA264_03300 are separated by 415 nucleotides CA264_03300 and CA264_03305 are separated by 110 nucleotides
CA264_03295: CA264_03295 - hypothetical protein, at 773,178 to 773,873
_03295
CA264_03300: CA264_03300 - hypothetical protein, at 774,289 to 774,489
_03300
CA264_03305: CA264_03305 - hypothetical protein, at 774,600 to 775,832
_03305
Position (kb) 774
775 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 773.358 kb on + strand, within CA264_03295 at 773.363 kb on - strand, within CA264_03295 at 773.393 kb on - strand, within CA264_03295 at 773.439 kb on + strand, within CA264_03295 at 773.664 kb on + strand, within CA264_03295 at 773.665 kb on - strand, within CA264_03295 at 773.952 kb on + strand at 773.952 kb on + strand at 773.953 kb on - strand at 773.962 kb on + strand at 773.962 kb on + strand at 773.963 kb on - strand at 773.965 kb on + strand at 773.965 kb on + strand at 773.965 kb on + strand at 773.966 kb on - strand at 773.968 kb on - strand at 773.968 kb on - strand at 773.971 kb on - strand at 774.108 kb on - strand at 774.113 kb on - strand at 774.185 kb on - strand at 774.221 kb on - strand at 774.259 kb on + strand at 774.259 kb on + strand at 774.260 kb on - strand at 774.260 kb on - strand at 774.265 kb on - strand at 774.268 kb on - strand at 774.269 kb on + strand at 774.269 kb on + strand at 774.270 kb on - strand at 774.270 kb on - strand at 774.353 kb on + strand, within CA264_03300 at 774.420 kb on + strand, within CA264_03300 at 774.443 kb on + strand, within CA264_03300 at 774.466 kb on + strand, within CA264_03300 at 774.471 kb on - strand at 774.512 kb on - strand at 774.512 kb on - strand at 774.514 kb on - strand at 774.573 kb on + strand at 774.602 kb on - strand at 774.616 kb on + strand at 774.617 kb on - strand at 774.659 kb on + strand at 774.672 kb on - strand at 774.690 kb on - strand at 774.728 kb on - strand, within CA264_03305 at 775.038 kb on - strand, within CA264_03305 at 775.108 kb on - strand, within CA264_03305 at 775.108 kb on - strand, within CA264_03305 at 775.108 kb on - strand, within CA264_03305 at 775.139 kb on + strand, within CA264_03305 at 775.139 kb on + strand, within CA264_03305 at 775.210 kb on + strand, within CA264_03305 at 775.215 kb on + strand, within CA264_03305 at 775.215 kb on + strand, within CA264_03305 at 775.239 kb on - strand, within CA264_03305 at 775.409 kb on + strand, within CA264_03305 at 775.409 kb on + strand, within CA264_03305
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 773,358 + CA264_03295 0.26 +0.0 773,363 - CA264_03295 0.27 -0.6 773,393 - CA264_03295 0.31 +0.6 773,439 + CA264_03295 0.38 -0.3 773,664 + CA264_03295 0.70 +1.8 773,665 - CA264_03295 0.70 +0.3 773,952 + -1.0 773,952 + +1.4 773,953 - -1.0 773,962 + +0.6 773,962 + +2.6 773,963 - -0.9 773,965 + +0.6 773,965 + -2.8 773,965 + -0.7 773,966 - -1.2 773,968 - +0.0 773,968 - +0.6 773,971 - +0.3 774,108 - -1.4 774,113 - -1.2 774,185 - +0.0 774,221 - -0.5 774,259 + -0.9 774,259 + -0.7 774,260 - -0.1 774,260 - -0.2 774,265 - -0.8 774,268 - -1.9 774,269 + -2.2 774,269 + -0.5 774,270 - -0.0 774,270 - -0.8 774,353 + CA264_03300 0.32 +0.0 774,420 + CA264_03300 0.65 -1.1 774,443 + CA264_03300 0.77 -0.4 774,466 + CA264_03300 0.88 +0.8 774,471 - -1.8 774,512 - -0.7 774,512 - +1.0 774,514 - +1.0 774,573 + -1.5 774,602 - +0.4 774,616 + -1.0 774,617 - +0.0 774,659 + -0.2 774,672 - +1.6 774,690 - +1.9 774,728 - CA264_03305 0.10 +0.0 775,038 - CA264_03305 0.36 +2.6 775,108 - CA264_03305 0.41 +1.6 775,108 - CA264_03305 0.41 -1.1 775,108 - CA264_03305 0.41 +0.4 775,139 + CA264_03305 0.44 -1.0 775,139 + CA264_03305 0.44 +0.0 775,210 + CA264_03305 0.49 +2.4 775,215 + CA264_03305 0.50 -1.3 775,215 + CA264_03305 0.50 +0.6 775,239 - CA264_03305 0.52 +0.2 775,409 + CA264_03305 0.66 -1.8 775,409 + CA264_03305 0.66 -2.3
Or see this region's nucleotide sequence