Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02610 and CA264_02615 are separated by 139 nucleotides CA264_02615 and CA264_02620 overlap by 4 nucleotides
CA264_02610: CA264_02610 - cation transporter, at 604,485 to 605,396
_02610
CA264_02615: CA264_02615 - DNA-binding response regulator, at 605,536 to 606,219
_02615
CA264_02620: CA264_02620 - two-component sensor histidine kinase, at 606,216 to 607,613
_02620
Position (kb) 605
606
607 Strain fitness (log2 ratio) -2
-1
0
1
2 at 604.539 kb on + strand at 604.539 kb on + strand at 604.539 kb on + strand at 604.548 kb on + strand at 604.548 kb on + strand at 604.651 kb on + strand, within CA264_02610 at 604.651 kb on + strand, within CA264_02610 at 604.652 kb on - strand, within CA264_02610 at 604.704 kb on + strand, within CA264_02610 at 604.706 kb on + strand, within CA264_02610 at 604.739 kb on + strand, within CA264_02610 at 604.739 kb on + strand, within CA264_02610 at 604.740 kb on - strand, within CA264_02610 at 604.804 kb on + strand, within CA264_02610 at 604.805 kb on - strand, within CA264_02610 at 604.874 kb on + strand, within CA264_02610 at 604.995 kb on - strand, within CA264_02610 at 605.034 kb on + strand, within CA264_02610 at 605.035 kb on - strand, within CA264_02610 at 605.035 kb on - strand, within CA264_02610 at 605.079 kb on - strand, within CA264_02610 at 605.142 kb on - strand, within CA264_02610 at 605.195 kb on - strand, within CA264_02610 at 605.266 kb on - strand, within CA264_02610 at 605.292 kb on + strand, within CA264_02610 at 605.292 kb on + strand, within CA264_02610 at 605.293 kb on - strand, within CA264_02610 at 605.397 kb on - strand at 605.397 kb on - strand at 605.424 kb on + strand at 605.424 kb on + strand at 605.424 kb on + strand at 605.424 kb on + strand at 605.424 kb on + strand at 605.425 kb on - strand at 605.425 kb on - strand at 605.429 kb on - strand at 605.468 kb on + strand at 605.469 kb on - strand at 605.469 kb on - strand at 605.469 kb on - strand at 605.469 kb on - strand at 605.517 kb on + strand at 605.517 kb on + strand at 605.517 kb on + strand at 605.518 kb on - strand at 605.608 kb on + strand, within CA264_02615 at 605.608 kb on + strand, within CA264_02615 at 605.609 kb on - strand, within CA264_02615 at 605.609 kb on - strand, within CA264_02615 at 605.626 kb on + strand, within CA264_02615 at 605.627 kb on - strand, within CA264_02615 at 605.645 kb on + strand, within CA264_02615 at 605.645 kb on + strand, within CA264_02615 at 605.828 kb on - strand, within CA264_02615 at 605.858 kb on + strand, within CA264_02615 at 605.858 kb on + strand, within CA264_02615 at 605.859 kb on - strand, within CA264_02615 at 606.016 kb on + strand, within CA264_02615 at 606.059 kb on + strand, within CA264_02615 at 606.059 kb on + strand, within CA264_02615 at 606.060 kb on - strand, within CA264_02615 at 606.140 kb on + strand, within CA264_02615 at 606.172 kb on - strand at 606.191 kb on - strand at 606.236 kb on - strand at 606.295 kb on - strand at 606.302 kb on + strand at 606.303 kb on - strand at 606.303 kb on - strand at 606.313 kb on - strand at 606.371 kb on + strand, within CA264_02620 at 606.391 kb on + strand, within CA264_02620 at 606.391 kb on + strand, within CA264_02620 at 606.391 kb on + strand, within CA264_02620 at 606.392 kb on - strand, within CA264_02620 at 606.463 kb on - strand, within CA264_02620 at 606.463 kb on - strand, within CA264_02620 at 606.463 kb on - strand, within CA264_02620 at 606.463 kb on - strand, within CA264_02620 at 606.516 kb on - strand, within CA264_02620 at 606.620 kb on + strand, within CA264_02620 at 606.649 kb on - strand, within CA264_02620
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 604,539 + -2.1 604,539 + -1.8 604,539 + +0.5 604,548 + +0.1 604,548 + -0.9 604,651 + CA264_02610 0.18 +1.5 604,651 + CA264_02610 0.18 -1.2 604,652 - CA264_02610 0.18 -0.3 604,704 + CA264_02610 0.24 +0.9 604,706 + CA264_02610 0.24 -2.6 604,739 + CA264_02610 0.28 -1.3 604,739 + CA264_02610 0.28 +0.5 604,740 - CA264_02610 0.28 -0.9 604,804 + CA264_02610 0.35 -1.9 604,805 - CA264_02610 0.35 +0.7 604,874 + CA264_02610 0.43 +0.1 604,995 - CA264_02610 0.56 +0.9 605,034 + CA264_02610 0.60 -0.5 605,035 - CA264_02610 0.60 -0.7 605,035 - CA264_02610 0.60 -0.3 605,079 - CA264_02610 0.65 +0.3 605,142 - CA264_02610 0.72 +0.2 605,195 - CA264_02610 0.78 -0.6 605,266 - CA264_02610 0.86 -2.2 605,292 + CA264_02610 0.88 -0.5 605,292 + CA264_02610 0.88 +0.3 605,293 - CA264_02610 0.89 -0.1 605,397 - -1.1 605,397 - -2.3 605,424 + -2.6 605,424 + -2.2 605,424 + +1.2 605,424 + +0.9 605,424 + +0.9 605,425 - -0.7 605,425 - -0.3 605,429 - -1.0 605,468 + +2.5 605,469 - -1.6 605,469 - -1.4 605,469 - -0.7 605,469 - +0.1 605,517 + +2.1 605,517 + +0.7 605,517 + -0.8 605,518 - -1.8 605,608 + CA264_02615 0.11 -1.0 605,608 + CA264_02615 0.11 +0.3 605,609 - CA264_02615 0.11 +0.9 605,609 - CA264_02615 0.11 +0.9 605,626 + CA264_02615 0.13 -0.0 605,627 - CA264_02615 0.13 +0.3 605,645 + CA264_02615 0.16 -0.2 605,645 + CA264_02615 0.16 -0.7 605,828 - CA264_02615 0.43 +0.3 605,858 + CA264_02615 0.47 +1.7 605,858 + CA264_02615 0.47 -0.3 605,859 - CA264_02615 0.47 -0.7 606,016 + CA264_02615 0.70 +1.5 606,059 + CA264_02615 0.76 -1.7 606,059 + CA264_02615 0.76 +0.9 606,060 - CA264_02615 0.77 +0.2 606,140 + CA264_02615 0.88 -1.0 606,172 - -0.3 606,191 - -1.8 606,236 - -0.0 606,295 - -1.8 606,302 + -0.3 606,303 - +0.2 606,303 - +1.5 606,313 - +0.5 606,371 + CA264_02620 0.11 +0.1 606,391 + CA264_02620 0.13 +1.7 606,391 + CA264_02620 0.13 -1.9 606,391 + CA264_02620 0.13 +0.4 606,392 - CA264_02620 0.13 -1.2 606,463 - CA264_02620 0.18 -0.2 606,463 - CA264_02620 0.18 +1.5 606,463 - CA264_02620 0.18 -0.5 606,463 - CA264_02620 0.18 +0.9 606,516 - CA264_02620 0.21 -0.1 606,620 + CA264_02620 0.29 -1.2 606,649 - CA264_02620 0.31 -1.2
Or see this region's nucleotide sequence