Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01695 and CA264_01700 are separated by 26 nucleotides CA264_01700 and CA264_01705 are separated by 157 nucleotides
CA264_01695: CA264_01695 - glutathionylspermidine synthase, at 397,194 to 398,372
_01695
CA264_01700: CA264_01700 - type I methionyl aminopeptidase, at 398,399 to 399,157
_01700
CA264_01705: CA264_01705 - NADH-quinone oxidoreductase subunit H, at 399,315 to 400,418
_01705
Position (kb) 398
399
400 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 397.516 kb on + strand, within CA264_01695 at 397.516 kb on + strand, within CA264_01695 at 397.571 kb on + strand, within CA264_01695 at 397.571 kb on + strand, within CA264_01695 at 397.571 kb on + strand, within CA264_01695 at 397.572 kb on - strand, within CA264_01695 at 397.572 kb on - strand, within CA264_01695 at 397.572 kb on - strand, within CA264_01695 at 397.573 kb on + strand, within CA264_01695 at 397.573 kb on + strand, within CA264_01695 at 397.718 kb on - strand, within CA264_01695 at 397.725 kb on + strand, within CA264_01695 at 397.725 kb on + strand, within CA264_01695 at 397.725 kb on + strand, within CA264_01695 at 397.754 kb on + strand, within CA264_01695 at 397.766 kb on + strand, within CA264_01695 at 397.768 kb on + strand, within CA264_01695 at 397.768 kb on + strand, within CA264_01695 at 397.769 kb on - strand, within CA264_01695 at 397.825 kb on + strand, within CA264_01695 at 397.826 kb on - strand, within CA264_01695 at 397.870 kb on + strand, within CA264_01695 at 397.870 kb on + strand, within CA264_01695 at 397.870 kb on + strand, within CA264_01695 at 397.870 kb on + strand, within CA264_01695 at 397.875 kb on - strand, within CA264_01695 at 397.907 kb on + strand, within CA264_01695 at 397.908 kb on - strand, within CA264_01695 at 397.994 kb on - strand, within CA264_01695 at 398.010 kb on + strand, within CA264_01695 at 398.011 kb on - strand, within CA264_01695 at 398.012 kb on + strand, within CA264_01695 at 398.012 kb on + strand, within CA264_01695 at 398.061 kb on + strand, within CA264_01695 at 398.068 kb on - strand, within CA264_01695 at 398.115 kb on + strand, within CA264_01695 at 398.116 kb on - strand at 398.131 kb on - strand, within CA264_01695 at 398.131 kb on - strand, within CA264_01695 at 398.131 kb on - strand, within CA264_01695 at 398.161 kb on + strand, within CA264_01695 at 398.188 kb on + strand, within CA264_01695 at 398.199 kb on + strand, within CA264_01695 at 398.199 kb on + strand, within CA264_01695 at 398.219 kb on - strand, within CA264_01695 at 398.327 kb on + strand at 398.328 kb on - strand at 398.328 kb on - strand at 398.331 kb on - strand at 398.337 kb on - strand at 398.371 kb on - strand at 398.406 kb on + strand at 398.406 kb on + strand at 398.483 kb on + strand, within CA264_01700 at 398.483 kb on + strand, within CA264_01700 at 398.484 kb on - strand, within CA264_01700 at 398.493 kb on + strand, within CA264_01700 at 398.493 kb on + strand, within CA264_01700 at 398.493 kb on + strand, within CA264_01700 at 398.493 kb on + strand, within CA264_01700 at 398.493 kb on + strand, within CA264_01700 at 398.493 kb on + strand, within CA264_01700 at 398.494 kb on - strand, within CA264_01700 at 398.494 kb on - strand, within CA264_01700 at 398.498 kb on - strand, within CA264_01700 at 398.506 kb on + strand, within CA264_01700 at 398.593 kb on + strand, within CA264_01700 at 398.594 kb on - strand, within CA264_01700 at 398.594 kb on - strand, within CA264_01700 at 398.630 kb on - strand, within CA264_01700 at 398.694 kb on + strand, within CA264_01700 at 398.695 kb on - strand, within CA264_01700 at 398.695 kb on - strand, within CA264_01700 at 398.695 kb on - strand, within CA264_01700 at 398.695 kb on - strand, within CA264_01700 at 398.729 kb on - strand, within CA264_01700 at 398.861 kb on - strand, within CA264_01700 at 398.880 kb on + strand, within CA264_01700 at 398.881 kb on - strand, within CA264_01700 at 398.884 kb on + strand, within CA264_01700 at 398.884 kb on + strand, within CA264_01700 at 398.884 kb on + strand, within CA264_01700 at 398.885 kb on - strand, within CA264_01700 at 399.000 kb on + strand, within CA264_01700 at 399.001 kb on - strand, within CA264_01700 at 399.029 kb on + strand, within CA264_01700 at 399.031 kb on + strand, within CA264_01700 at 399.060 kb on + strand, within CA264_01700 at 399.060 kb on + strand, within CA264_01700 at 399.061 kb on - strand, within CA264_01700 at 399.063 kb on + strand, within CA264_01700 at 399.080 kb on + strand, within CA264_01700 at 399.080 kb on + strand, within CA264_01700 at 399.081 kb on - strand, within CA264_01700 at 399.081 kb on - strand, within CA264_01700 at 399.085 kb on - strand at 399.109 kb on + strand at 399.109 kb on + strand at 399.112 kb on - strand at 399.154 kb on - strand at 399.184 kb on + strand at 399.199 kb on - strand at 399.199 kb on - strand at 399.246 kb on - strand at 399.259 kb on + strand at 399.270 kb on + strand at 399.274 kb on + strand at 399.297 kb on + strand at 399.315 kb on - strand at 399.315 kb on - strand at 399.315 kb on - strand at 399.315 kb on - strand at 399.338 kb on - strand at 399.398 kb on + strand at 399.488 kb on + strand, within CA264_01705 at 399.494 kb on - strand, within CA264_01705 at 399.553 kb on + strand, within CA264_01705 at 399.591 kb on - strand, within CA264_01705 at 399.614 kb on - strand, within CA264_01705 at 399.683 kb on + strand, within CA264_01705 at 399.693 kb on + strand, within CA264_01705 at 399.693 kb on + strand, within CA264_01705 at 399.694 kb on - strand, within CA264_01705 at 399.764 kb on - strand, within CA264_01705 at 399.889 kb on + strand, within CA264_01705 at 399.890 kb on - strand, within CA264_01705 at 399.895 kb on + strand, within CA264_01705 at 399.896 kb on - strand, within CA264_01705 at 399.899 kb on + strand, within CA264_01705 at 399.920 kb on + strand, within CA264_01705 at 399.924 kb on - strand, within CA264_01705 at 399.924 kb on - strand, within CA264_01705 at 399.933 kb on - strand, within CA264_01705 at 399.933 kb on - strand, within CA264_01705 at 399.948 kb on - strand, within CA264_01705 at 400.103 kb on + strand, within CA264_01705 at 400.103 kb on + strand, within CA264_01705 at 400.104 kb on - strand, within CA264_01705 at 400.107 kb on - strand, within CA264_01705
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 397,516 + CA264_01695 0.27 -2.1 397,516 + CA264_01695 0.27 -0.8 397,571 + CA264_01695 0.32 -1.7 397,571 + CA264_01695 0.32 +0.1 397,571 + CA264_01695 0.32 -1.7 397,572 - CA264_01695 0.32 +0.2 397,572 - CA264_01695 0.32 -0.8 397,572 - CA264_01695 0.32 +0.6 397,573 + CA264_01695 0.32 -0.0 397,573 + CA264_01695 0.32 -0.4 397,718 - CA264_01695 0.44 -0.7 397,725 + CA264_01695 0.45 -1.5 397,725 + CA264_01695 0.45 -0.4 397,725 + CA264_01695 0.45 -1.7 397,754 + CA264_01695 0.47 -1.2 397,766 + CA264_01695 0.49 -1.1 397,768 + CA264_01695 0.49 -1.0 397,768 + CA264_01695 0.49 -0.7 397,769 - CA264_01695 0.49 -0.6 397,825 + CA264_01695 0.54 -0.3 397,826 - CA264_01695 0.54 -0.8 397,870 + CA264_01695 0.57 -1.1 397,870 + CA264_01695 0.57 -1.4 397,870 + CA264_01695 0.57 +2.2 397,870 + CA264_01695 0.57 -1.0 397,875 - CA264_01695 0.58 -1.4 397,907 + CA264_01695 0.60 -1.4 397,908 - CA264_01695 0.61 -0.6 397,994 - CA264_01695 0.68 +2.2 398,010 + CA264_01695 0.69 -0.8 398,011 - CA264_01695 0.69 -2.8 398,012 + CA264_01695 0.69 -0.3 398,012 + CA264_01695 0.69 -0.2 398,061 + CA264_01695 0.74 +2.2 398,068 - CA264_01695 0.74 -0.1 398,115 + CA264_01695 0.78 -0.4 398,116 - +0.2 398,131 - CA264_01695 0.79 -1.1 398,131 - CA264_01695 0.79 -0.1 398,131 - CA264_01695 0.79 -2.3 398,161 + CA264_01695 0.82 -2.3 398,188 + CA264_01695 0.84 +0.9 398,199 + CA264_01695 0.85 -0.7 398,199 + CA264_01695 0.85 -0.1 398,219 - CA264_01695 0.87 -0.8 398,327 + +1.0 398,328 - +2.2 398,328 - +2.2 398,331 - -0.5 398,337 - -0.4 398,371 - +0.9 398,406 + -1.0 398,406 + -0.7 398,483 + CA264_01700 0.11 -1.0 398,483 + CA264_01700 0.11 +0.3 398,484 - CA264_01700 0.11 -1.4 398,493 + CA264_01700 0.12 -2.0 398,493 + CA264_01700 0.12 +2.2 398,493 + CA264_01700 0.12 -1.2 398,493 + CA264_01700 0.12 +0.7 398,493 + CA264_01700 0.12 -1.5 398,493 + CA264_01700 0.12 -0.4 398,494 - CA264_01700 0.13 -1.4 398,494 - CA264_01700 0.13 +0.7 398,498 - CA264_01700 0.13 -2.5 398,506 + CA264_01700 0.14 +0.2 398,593 + CA264_01700 0.26 -0.2 398,594 - CA264_01700 0.26 -0.9 398,594 - CA264_01700 0.26 +2.2 398,630 - CA264_01700 0.30 -0.1 398,694 + CA264_01700 0.39 -0.4 398,695 - CA264_01700 0.39 -0.1 398,695 - CA264_01700 0.39 -0.2 398,695 - CA264_01700 0.39 -0.4 398,695 - CA264_01700 0.39 -0.5 398,729 - CA264_01700 0.43 +2.2 398,861 - CA264_01700 0.61 +1.8 398,880 + CA264_01700 0.63 +0.5 398,881 - CA264_01700 0.64 -0.6 398,884 + CA264_01700 0.64 -1.5 398,884 + CA264_01700 0.64 +0.2 398,884 + CA264_01700 0.64 +0.1 398,885 - CA264_01700 0.64 -0.6 399,000 + CA264_01700 0.79 -0.7 399,001 - CA264_01700 0.79 -1.1 399,029 + CA264_01700 0.83 -0.8 399,031 + CA264_01700 0.83 -0.7 399,060 + CA264_01700 0.87 -1.8 399,060 + CA264_01700 0.87 +0.2 399,061 - CA264_01700 0.87 +0.6 399,063 + CA264_01700 0.87 -1.3 399,080 + CA264_01700 0.90 +0.2 399,080 + CA264_01700 0.90 -1.4 399,081 - CA264_01700 0.90 -0.3 399,081 - CA264_01700 0.90 -0.9 399,085 - -0.8 399,109 + -1.8 399,109 + -2.7 399,112 - -1.3 399,154 - +0.4 399,184 + +0.2 399,199 - -1.3 399,199 - +0.1 399,246 - -0.3 399,259 + -0.1 399,270 + -0.8 399,274 + +2.2 399,297 + -1.5 399,315 - -1.9 399,315 - +1.2 399,315 - -0.1 399,315 - +1.5 399,338 - -2.1 399,398 + +3.8 399,488 + CA264_01705 0.16 +3.8 399,494 - CA264_01705 0.16 +3.9 399,553 + CA264_01705 0.22 +4.4 399,591 - CA264_01705 0.25 +4.3 399,614 - CA264_01705 0.27 +4.2 399,683 + CA264_01705 0.33 +4.9 399,693 + CA264_01705 0.34 +4.1 399,693 + CA264_01705 0.34 +4.1 399,694 - CA264_01705 0.34 +4.3 399,764 - CA264_01705 0.41 +4.0 399,889 + CA264_01705 0.52 +4.6 399,890 - CA264_01705 0.52 +4.1 399,895 + CA264_01705 0.53 +2.2 399,896 - CA264_01705 0.53 +5.3 399,899 + CA264_01705 0.53 +4.2 399,920 + CA264_01705 0.55 +3.9 399,924 - CA264_01705 0.55 +4.8 399,924 - CA264_01705 0.55 +4.1 399,933 - CA264_01705 0.56 +4.5 399,933 - CA264_01705 0.56 +4.1 399,948 - CA264_01705 0.57 +4.4 400,103 + CA264_01705 0.71 +3.8 400,103 + CA264_01705 0.71 +4.5 400,104 - CA264_01705 0.71 +4.5 400,107 - CA264_01705 0.72 +3.6
Or see this region's nucleotide sequence