Experiment: m.b. Nalidixic 0.03 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01655 and CA264_01660 are separated by 244 nucleotides CA264_01660 and CA264_01665 are separated by 94 nucleotides
CA264_01655: CA264_01655 - CoA transferase, at 388,945 to 390,054
_01655
CA264_01660: CA264_01660 - hypothetical protein, at 390,299 to 390,979
_01660
CA264_01665: CA264_01665 - phenylalanine 4-monooxygenase, at 391,074 to 391,817
_01665
Position (kb) 390
391 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 389.320 kb on + strand, within CA264_01655 at 389.365 kb on + strand, within CA264_01655 at 389.366 kb on - strand, within CA264_01655 at 389.644 kb on - strand, within CA264_01655 at 389.721 kb on + strand, within CA264_01655 at 389.739 kb on - strand, within CA264_01655 at 389.776 kb on - strand, within CA264_01655 at 389.834 kb on + strand, within CA264_01655 at 389.834 kb on + strand, within CA264_01655 at 390.002 kb on + strand at 390.053 kb on - strand at 390.057 kb on + strand at 390.057 kb on + strand at 390.208 kb on + strand at 390.213 kb on - strand at 390.213 kb on - strand at 390.229 kb on + strand at 390.234 kb on + strand at 390.272 kb on - strand at 390.272 kb on - strand at 390.319 kb on + strand at 390.319 kb on + strand at 390.319 kb on + strand at 390.394 kb on + strand, within CA264_01660 at 390.394 kb on + strand, within CA264_01660 at 390.394 kb on + strand, within CA264_01660 at 390.395 kb on - strand, within CA264_01660 at 390.403 kb on + strand, within CA264_01660 at 390.483 kb on + strand, within CA264_01660 at 390.483 kb on + strand, within CA264_01660 at 390.569 kb on + strand, within CA264_01660 at 390.595 kb on - strand, within CA264_01660 at 390.595 kb on - strand, within CA264_01660 at 390.595 kb on - strand, within CA264_01660 at 390.628 kb on + strand, within CA264_01660 at 390.639 kb on - strand, within CA264_01660 at 390.665 kb on + strand, within CA264_01660 at 390.690 kb on - strand, within CA264_01660 at 390.884 kb on - strand, within CA264_01660 at 391.076 kb on - strand at 391.144 kb on - strand at 391.199 kb on - strand, within CA264_01665 at 391.199 kb on - strand, within CA264_01665 at 391.199 kb on - strand, within CA264_01665 at 391.725 kb on - strand, within CA264_01665 at 391.725 kb on - strand, within CA264_01665 at 391.767 kb on + strand at 391.768 kb on - strand at 391.768 kb on - strand at 391.790 kb on - strand at 391.818 kb on - strand at 391.818 kb on - strand at 391.834 kb on - strand at 391.959 kb on + strand at 391.960 kb on - strand at 391.975 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.03 mg/ml remove 389,320 + CA264_01655 0.34 -1.5 389,365 + CA264_01655 0.38 +0.5 389,366 - CA264_01655 0.38 -1.8 389,644 - CA264_01655 0.63 -3.1 389,721 + CA264_01655 0.70 +2.5 389,739 - CA264_01655 0.72 +0.8 389,776 - CA264_01655 0.75 +0.6 389,834 + CA264_01655 0.80 +0.0 389,834 + CA264_01655 0.80 -1.9 390,002 + -0.0 390,053 - +1.8 390,057 + +0.2 390,057 + +0.6 390,208 + -1.0 390,213 - +1.2 390,213 - -2.0 390,229 + +2.0 390,234 + -0.2 390,272 - -0.1 390,272 - -0.5 390,319 + -2.0 390,319 + +0.9 390,319 + +1.1 390,394 + CA264_01660 0.14 +1.2 390,394 + CA264_01660 0.14 +0.2 390,394 + CA264_01660 0.14 +1.5 390,395 - CA264_01660 0.14 -0.1 390,403 + CA264_01660 0.15 -1.1 390,483 + CA264_01660 0.27 +0.8 390,483 + CA264_01660 0.27 -1.5 390,569 + CA264_01660 0.40 +1.6 390,595 - CA264_01660 0.43 +0.2 390,595 - CA264_01660 0.43 +0.8 390,595 - CA264_01660 0.43 -1.1 390,628 + CA264_01660 0.48 -1.1 390,639 - CA264_01660 0.50 -0.0 390,665 + CA264_01660 0.54 -0.4 390,690 - CA264_01660 0.57 +0.6 390,884 - CA264_01660 0.86 -1.4 391,076 - -0.2 391,144 - -1.3 391,199 - CA264_01665 0.17 -0.6 391,199 - CA264_01665 0.17 -1.5 391,199 - CA264_01665 0.17 +0.6 391,725 - CA264_01665 0.88 +1.2 391,725 - CA264_01665 0.88 +0.1 391,767 + +0.6 391,768 - +0.2 391,768 - +0.2 391,790 - +0.2 391,818 - -0.4 391,818 - +0.9 391,834 - +0.2 391,959 + +0.7 391,960 - +0.6 391,975 - -1.9
Or see this region's nucleotide sequence