Strain Fitness in Escherichia coli BW25113 around b3899

Experiment: acetate 70 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	acetate 70 mM
4,087,983	-				-0.4
4,087,995	-	frvX	b3898	0.11	+0.1
4,087,995	-	frvX	b3898	0.11	+1.2
4,088,017	+	frvX	b3898	0.13	+0.3
4,088,025	-	frvX	b3898	0.14	+1.2
4,088,027	+	frvX	b3898	0.14	-0.1
4,088,064	-	frvX	b3898	0.17	-0.6
4,088,064	-	frvX	b3898	0.17	-0.1
4,088,094	-	frvX	b3898	0.20	-0.9
4,088,108	+	frvX	b3898	0.21	-0.1
4,088,319	+	frvX	b3898	0.41	-0.0
4,088,358	-	frvX	b3898	0.45	+1.8
4,088,358	-	frvX	b3898	0.45	+0.9
4,088,358	-	frvX	b3898	0.45	+0.0
4,088,651	+	frvX	b3898	0.72	-0.3
4,088,651	-	frvX	b3898	0.72	-1.1
4,088,653	-	frvX	b3898	0.72	+0.5
4,088,660	-	frvX	b3898	0.73	-0.8
4,088,692	-	frvX	b3898	0.76	-1.1
4,088,692	-	frvX	b3898	0.76	-0.4
4,088,727	-	frvX	b3898	0.79	-1.6
4,088,727	-	frvX	b3898	0.79	+1.4
4,088,729	+	frvX	b3898	0.79	-0.6
4,088,801	+	frvX	b3898	0.86	-0.1
4,088,855	+				+0.7
4,088,865	+				-1.7
4,088,865	+				+1.0
4,088,921	-				+1.7
4,088,921	-				-1.6
4,088,951	-				+0.2
4,089,064	-				+0.4
4,089,072	+				+0.5
4,089,147	-	frvB	b3899	0.14	+0.9
4,089,149	+	frvB	b3899	0.15	-0.0
4,089,284	-	frvB	b3899	0.24	+1.7
4,089,284	-	frvB	b3899	0.24	+1.7
4,089,516	-	frvB	b3899	0.40	+0.8
4,089,535	+	frvB	b3899	0.41	+0.4
4,089,608	-	frvB	b3899	0.46	+0.5
4,089,625	+	frvB	b3899	0.47	+0.1
4,089,724	+	frvB	b3899	0.54	+1.4
4,089,731	+	frvB	b3899	0.55	-1.6
4,089,824	-	frvB	b3899	0.61	+0.6
4,089,824	-	frvB	b3899	0.61	+0.9
4,089,825	+	frvB	b3899	0.61	+0.6
4,089,825	+	frvB	b3899	0.61	+1.2
4,089,863	-	frvB	b3899	0.64	+0.8
4,089,899	+	frvB	b3899	0.66	-0.2
4,089,948	-	frvB	b3899	0.70	-1.0
4,090,008	-	frvB	b3899	0.74	+1.1
4,090,008	-	frvB	b3899	0.74	-2.3
4,090,008	-	frvB	b3899	0.74	+0.4
4,090,172	+	frvB	b3899	0.85	+1.6
4,090,172	+	frvB	b3899	0.85	+0.2
4,090,250	+				+0.2
4,090,250	+				+2.0
4,090,333	-				-0.1
4,090,333	-				+0.1
4,090,362	+				-0.1
4,090,362	+				-0.4
4,090,392	-				+0.6
4,090,399	+				-0.1
4,090,399	+				+0.3
4,090,417	+				-0.6
4,090,435	-				-0.7
4,090,443	-				-0.4
4,090,554	+	frvA	b3900	0.34	+0.7
4,090,554	+	frvA	b3900	0.34	-1.9
4,090,554	+	frvA	b3900	0.34	+2.2
4,090,554	+	frvA	b3900	0.34	-1.0
4,090,561	-	frvA	b3900	0.36	-0.9
4,090,561	-	frvA	b3900	0.36	-1.0
4,090,591	+	frvA	b3900	0.43	+0.9
4,090,591	+	frvA	b3900	0.43	+0.4
4,090,645	+	frvA	b3900	0.55	+0.1
4,090,655	+	frvA	b3900	0.57	-0.4
4,090,660	+	frvA	b3900	0.58	-0.9
4,090,667	-	frvA	b3900	0.60	+0.1
4,090,670	+	frvA	b3900	0.60	-0.5
4,090,679	+	frvA	b3900	0.62	-0.2
4,090,679	+	frvA	b3900	0.62	-0.0
4,090,681	+	frvA	b3900	0.63	+1.2
4,090,706	+	frvA	b3900	0.68	+0.6
4,090,708	+	frvA	b3900	0.69	+1.9
4,090,708	+	frvA	b3900	0.69	+1.2
4,090,711	+	frvA	b3900	0.70	-0.0
4,090,714	+	frvA	b3900	0.70	+0.4
4,090,719	+	frvA	b3900	0.71	+0.6
4,090,719	+	frvA	b3900	0.71	-1.0
4,090,719	+	frvA	b3900	0.71	+0.4
4,090,729	+	frvA	b3900	0.74	+0.1
4,090,729	+	frvA	b3900	0.74	+1.8
4,090,729	+	frvA	b3900	0.74	+0.4
4,090,729	+	frvA	b3900	0.74	-0.6
4,090,732	-	frvA	b3900	0.74	-0.9
4,090,764	+	frvA	b3900	0.81	+0.4
4,090,767	+	frvA	b3900	0.82	+0.7
4,090,767	+	frvA	b3900	0.82	+1.3
4,090,767	+	frvA	b3900	0.82	+0.2
4,090,767	+	frvA	b3900	0.82	+0.0
4,090,767	+	frvA	b3900	0.82	-0.1
4,090,767	+	frvA	b3900	0.82	-0.1
4,090,767	+	frvA	b3900	0.82	-0.4
4,090,767	+	frvA	b3900	0.82	+1.2
4,090,767	+	frvA	b3900	0.82	+0.9
4,090,777	+	frvA	b3900	0.84	+0.1
4,090,777	+	frvA	b3900	0.84	+0.1
4,090,778	+	frvA	b3900	0.85	+0.4
4,090,778	+	frvA	b3900	0.85	+1.4
4,090,788	+	frvA	b3900	0.87	+1.0
4,090,788	+	frvA	b3900	0.87	-0.2
4,090,788	+	frvA	b3900	0.87	+0.4
4,090,802	+				+1.4
4,090,809	+				-0.4
4,090,821	+				+0.6
4,090,821	+				+0.8
4,090,821	+				+1.2
4,090,826	+				+1.2
4,090,829	-				-1.3
4,090,831	+				-0.1
4,090,831	+				-1.1
4,090,831	+				+0.6
4,090,831	+				+0.6
4,090,831	+				+1.4
4,090,831	+				-1.6
4,090,837	+				+1.1
4,090,837	+				+0.6
4,090,842	+				-1.0
4,090,842	+				-0.4
4,090,879	+				+1.2
4,090,879	+				-0.6
4,090,892	+				+0.4
4,090,895	+				+0.3
4,090,899	+				+0.4
4,090,900	-				+0.3
4,090,900	-				-1.6
4,090,902	+				+0.3
4,090,903	-				-1.4
4,090,910	+				+0.4
4,090,918	-				-0.9
4,090,967	+				-0.1
4,090,967	+				-0.2
4,090,967	+				+0.1
4,090,969	+				-1.1
4,090,970	+				+2.0
4,090,970	+				+0.3
4,090,972	+				+0.1
4,090,972	+				-0.5
4,091,136	-				+0.4
4,091,139	-				-0.1
4,091,162	-				+0.6
4,091,173	+				-0.6
4,091,173	+				+0.1
4,091,178	+				+1.1
4,091,181	-	yiiL	b3901	0.11	-0.9
4,091,181	-	yiiL	b3901	0.11	-0.0
4,091,181	-	yiiL	b3901	0.11	+1.2
4,091,181	-	yiiL	b3901	0.11	+0.2
4,091,181	-	yiiL	b3901	0.11	-0.1
4,091,183	-	yiiL	b3901	0.11	+0.3
4,091,183	-	yiiL	b3901	0.11	+1.2
4,091,183	-	yiiL	b3901	0.11	-0.6
4,091,186	-	yiiL	b3901	0.12	-1.1
4,091,186	-	yiiL	b3901	0.12	+0.3
4,091,186	-	yiiL	b3901	0.12	-1.7
4,091,186	-	yiiL	b3901	0.12	-1.7
4,091,188	-	yiiL	b3901	0.13	-0.6
4,091,188	-	yiiL	b3901	0.13	+0.9
4,091,190	+	yiiL	b3901	0.14	-0.3
4,091,190	-	yiiL	b3901	0.14	+0.6
4,091,190	-	yiiL	b3901	0.14	-0.4
4,091,190	-	yiiL	b3901	0.14	-1.4
4,091,190	-	yiiL	b3901	0.14	-0.1
4,091,192	+	yiiL	b3901	0.14	-0.0
4,091,200	-	yiiL	b3901	0.17	+0.4
4,091,201	-	yiiL	b3901	0.17	+1.2
4,091,201	-	yiiL	b3901	0.17	-0.6
4,091,201	-	yiiL	b3901	0.17	-0.5
4,091,202	-	yiiL	b3901	0.17	+0.5
4,091,203	-	yiiL	b3901	0.18	-0.0
4,091,207	-	yiiL	b3901	0.19	+0.6
4,091,212	-	yiiL	b3901	0.21	-0.6
4,091,215	-	yiiL	b3901	0.22	+0.4
4,091,226	-	yiiL	b3901	0.25	+0.2
4,091,226	-	yiiL	b3901	0.25	-0.7
4,091,253	+	yiiL	b3901	0.34	-0.1
4,091,256	-	yiiL	b3901	0.35	+0.4
4,091,261	-	yiiL	b3901	0.36	-0.1
4,091,270	-	yiiL	b3901	0.39	+0.6
4,091,301	-	yiiL	b3901	0.49	+0.5
4,091,320	-	yiiL	b3901	0.55	-0.9
4,091,350	-	yiiL	b3901	0.64	+0.1
4,091,350	-	yiiL	b3901	0.64	+1.1
4,091,350	-	yiiL	b3901	0.64	+0.6
4,091,370	+	yiiL	b3901	0.71	-0.5
4,091,380	-	yiiL	b3901	0.74	-0.1
4,091,380	-	yiiL	b3901	0.74	+0.3
4,091,380	-	yiiL	b3901	0.74	+1.4