Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3176

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
3,554,685	+				-0.8
3,554,685	+				-0.9
3,554,686	-				-0.8
3,554,686	-				+1.7
3,554,686	-				-2.5
3,554,686	-				+0.1
3,554,686	-				-0.2
3,554,686	-				+0.3
3,554,686	-				+0.3
3,554,686	-				+0.1
3,554,787	+				-1.8
3,554,787	+				+0.8
3,554,787	+				-0.7
3,554,787	+				-0.3
3,554,787	+				-0.5
3,554,787	+				-0.5
3,554,787	+				-0.8
3,554,787	+				-0.2
3,554,787	+				-1.0
3,554,787	+				+0.3
3,554,788	-				+0.7
3,554,788	-				+0.1
3,554,788	-				-2.8
3,554,788	-				-0.3
3,554,788	-				-0.3
3,554,788	-				+0.0
3,554,788	-				-0.3
3,554,788	-				-0.7
3,554,788	-				+1.4
3,554,788	-				-0.7
3,554,854	-				-1.0
3,554,888	+				-0.8
3,554,889	-				-1.2
3,554,910	+				-0.2
3,554,941	+				-0.5
3,554,942	-				-0.4
3,554,942	-				-0.3
3,554,942	-				+1.1
3,554,961	-				+0.7
3,555,082	-		PfGW456L13_3175	0.71	+0.8
3,555,082	-		PfGW456L13_3175	0.71	+1.0
3,555,127	+				+0.7
3,555,127	+				-0.2
3,555,128	-				-0.1
3,555,177	+				-1.1
3,555,177	+				-0.0
3,555,241	+				+0.3
3,555,241	+				-0.3
3,555,242	-				+3.7
3,555,242	-				+0.0
3,555,299	-				-0.9
3,555,308	+				+3.5
3,555,309	-				-1.0
3,555,345	+				-2.0
3,555,346	-				-0.9
3,555,386	-				-0.4
3,555,394	+				-0.5
3,555,499	+				+0.2
3,555,499	+				-0.4
3,555,499	+				-0.9
3,555,499	+				+0.8
3,555,499	+				+0.3
3,555,500	-				-1.3
3,555,500	-				-0.8
3,555,567	+				-0.2
3,555,568	-				-0.4
3,555,600	+				+1.1
3,555,601	-				+0.9
3,555,684	+				-0.3
3,555,685	-				-0.4
3,555,782	+				-0.6
3,556,121	+		PfGW456L13_3176	0.20	-0.1
3,556,121	+		PfGW456L13_3176	0.20	-0.4
3,556,121	+		PfGW456L13_3176	0.20	+1.1
3,556,122	-		PfGW456L13_3176	0.20	-1.9
3,556,122	-		PfGW456L13_3176	0.20	-0.5
3,556,122	-		PfGW456L13_3176	0.20	-1.0
3,556,122	-		PfGW456L13_3176	0.20	+0.0
3,556,305	+		PfGW456L13_3176	0.26	+0.0
3,556,305	+		PfGW456L13_3176	0.26	-1.2
3,556,305	+		PfGW456L13_3176	0.26	+1.0
3,556,306	-		PfGW456L13_3176	0.26	+0.3
3,556,317	+		PfGW456L13_3176	0.26	+0.5
3,556,317	+		PfGW456L13_3176	0.26	-0.9
3,556,317	+		PfGW456L13_3176	0.26	-1.9
3,556,317	+		PfGW456L13_3176	0.26	+0.8
3,556,318	-		PfGW456L13_3176	0.26	+0.4
3,556,318	-		PfGW456L13_3176	0.26	+0.2
3,556,321	+		PfGW456L13_3176	0.27	-0.1
3,556,321	+		PfGW456L13_3176	0.27	+0.3
3,556,321	+		PfGW456L13_3176	0.27	-0.5
3,556,322	-		PfGW456L13_3176	0.27	+0.2
3,556,322	-		PfGW456L13_3176	0.27	+1.3
3,556,322	-		PfGW456L13_3176	0.27	+0.7
3,556,322	-		PfGW456L13_3176	0.27	+1.5
3,556,322	-		PfGW456L13_3176	0.27	+0.7
3,556,322	-		PfGW456L13_3176	0.27	+0.2
3,556,354	+		PfGW456L13_3176	0.28	-0.1
3,556,354	+		PfGW456L13_3176	0.28	-0.2
3,556,403	+		PfGW456L13_3176	0.29	+0.8
3,556,403	+				+1.7
3,556,403	+		PfGW456L13_3176	0.29	-1.1
3,556,403	+		PfGW456L13_3176	0.29	+0.9
3,556,403	+		PfGW456L13_3176	0.29	-1.8
3,556,403	+		PfGW456L13_3176	0.29	-0.7
3,556,403	+		PfGW456L13_3176	0.29	-1.7
3,556,403	+		PfGW456L13_3176	0.29	-1.1
3,556,403	+		PfGW456L13_3176	0.29	-3.6
3,556,403	+		PfGW456L13_3176	0.29	-0.5
3,556,404	-		PfGW456L13_3176	0.29	-0.2
3,556,404	-		PfGW456L13_3176	0.29	-0.0
3,556,404	-		PfGW456L13_3176	0.29	-0.1
3,556,404	-		PfGW456L13_3176	0.29	-0.9
3,556,404	-		PfGW456L13_3176	0.29	-0.4
3,556,404	-		PfGW456L13_3176	0.29	-0.4
3,556,404	-		PfGW456L13_3176	0.29	-0.9
3,556,404	-		PfGW456L13_3176	0.29	+0.0
3,556,404	-		PfGW456L13_3176	0.29	-0.1
3,556,404	-		PfGW456L13_3176	0.29	+0.6
3,556,404	-		PfGW456L13_3176	0.29	+1.0
3,556,404	-		PfGW456L13_3176	0.29	+2.1
3,556,404	-		PfGW456L13_3176	0.29	-0.6
3,556,404	-		PfGW456L13_3176	0.29	-0.3
3,556,404	-		PfGW456L13_3176	0.29	-2.3
3,556,404	-		PfGW456L13_3176	0.29	+1.0
3,556,444	-		PfGW456L13_3176	0.31	-1.2
3,556,493	+		PfGW456L13_3176	0.32	+1.4
3,556,493	+		PfGW456L13_3176	0.32	+0.9
3,556,493	+		PfGW456L13_3176	0.32	-1.5
3,556,493	+		PfGW456L13_3176	0.32	+0.5
3,556,493	+		PfGW456L13_3176	0.32	+0.2
3,556,493	+				+1.7
3,556,494	-		PfGW456L13_3176	0.32	+1.4
3,556,494	-		PfGW456L13_3176	0.32	+0.8
3,556,494	-		PfGW456L13_3176	0.32	-0.2
3,556,494	-		PfGW456L13_3176	0.32	-1.2
3,556,494	-		PfGW456L13_3176	0.32	+0.1
3,556,494	-		PfGW456L13_3176	0.32	-0.0
3,556,525	+		PfGW456L13_3176	0.33	+1.3
3,556,525	+		PfGW456L13_3176	0.33	-0.0
3,556,526	-		PfGW456L13_3176	0.33	+0.1
3,556,526	-		PfGW456L13_3176	0.33	-0.4
3,556,526	-		PfGW456L13_3176	0.33	-1.7
3,556,539	+		PfGW456L13_3176	0.34	-1.7
3,556,657	+		PfGW456L13_3176	0.38	-0.9
3,556,658	-		PfGW456L13_3176	0.38	+0.4
3,556,658	-		PfGW456L13_3176	0.38	-0.8
3,556,660	+		PfGW456L13_3176	0.38	-0.2
3,556,660	+		PfGW456L13_3176	0.38	+0.5
3,556,660	+		PfGW456L13_3176	0.38	-0.9
3,556,660	+		PfGW456L13_3176	0.38	+0.2
3,556,660	+		PfGW456L13_3176	0.38	-0.1
3,556,660	+		PfGW456L13_3176	0.38	-0.5
3,556,661	-		PfGW456L13_3176	0.38	-0.7
3,556,661	-		PfGW456L13_3176	0.38	-1.9
3,556,894	+		PfGW456L13_3176	0.46	-1.2
3,556,894	+		PfGW456L13_3176	0.46	-0.2
3,556,921	+		PfGW456L13_3176	0.47	+1.4
3,556,921	+		PfGW456L13_3176	0.47	-1.7
3,556,921	+		PfGW456L13_3176	0.47	-0.7
3,556,921	+		PfGW456L13_3176	0.47	+0.6
3,556,921	+		PfGW456L13_3176	0.47	-1.1
3,556,921	+		PfGW456L13_3176	0.47	-0.6
3,556,922	-		PfGW456L13_3176	0.47	-0.5
3,556,922	-		PfGW456L13_3176	0.47	+0.0
3,556,922	-		PfGW456L13_3176	0.47	-0.8
3,556,922	-		PfGW456L13_3176	0.47	-2.1
3,556,924	+		PfGW456L13_3176	0.47	-1.0
3,556,924	+		PfGW456L13_3176	0.47	-0.3
3,556,925	-		PfGW456L13_3176	0.47	+1.0
3,557,018	-		PfGW456L13_3176	0.50	+0.2
3,557,132	-		PfGW456L13_3176	0.54	+1.7
3,557,132	-				+1.7
3,557,132	-		PfGW456L13_3176	0.54	-3.0
3,557,132	-		PfGW456L13_3176	0.54	+0.6
3,557,132	-		PfGW456L13_3176	0.54	-1.4
3,557,165	-		PfGW456L13_3176	0.55	-0.5
3,557,200	+		PfGW456L13_3176	0.56	-0.5
3,557,235	+		PfGW456L13_3176	0.57	-0.0
3,557,278	+		PfGW456L13_3176	0.59	-2.8
3,557,279	-		PfGW456L13_3176	0.59	-1.2
3,557,279	-		PfGW456L13_3176	0.59	+1.0
3,557,279	-		PfGW456L13_3176	0.59	+0.5
3,557,279	-		PfGW456L13_3176	0.59	-0.8
3,557,319	+		PfGW456L13_3176	0.60	+1.3
3,557,425	+		PfGW456L13_3176	0.64	+0.2
3,557,425	+		PfGW456L13_3176	0.64	+1.0
3,557,426	-		PfGW456L13_3176	0.64	-0.2
3,557,426	-		PfGW456L13_3176	0.64	-0.5
3,557,426	-		PfGW456L13_3176	0.64	+0.0
3,557,426	-		PfGW456L13_3176	0.64	+0.0
3,557,426	-		PfGW456L13_3176	0.64	-2.1
3,557,457	+		PfGW456L13_3176	0.65	-1.9
3,557,546	+		PfGW456L13_3176	0.68	-0.1
3,557,546	+		PfGW456L13_3176	0.68	+0.9
3,557,546	+		PfGW456L13_3176	0.68	-0.2
3,557,547	-		PfGW456L13_3176	0.68	-0.0
3,557,547	-		PfGW456L13_3176	0.68	-0.3
3,557,547	-		PfGW456L13_3176	0.68	+0.2
3,557,547	-		PfGW456L13_3176	0.68	-0.7
3,557,547	-		PfGW456L13_3176	0.68	-1.8
3,557,547	-		PfGW456L13_3176	0.68	-2.1
3,557,560	+		PfGW456L13_3176	0.68	-1.4
3,557,560	+		PfGW456L13_3176	0.68	-2.5
3,557,560	+		PfGW456L13_3176	0.68	+1.7
3,557,561	-		PfGW456L13_3176	0.68	-0.7
3,557,561	-		PfGW456L13_3176	0.68	-0.2
3,557,561	-		PfGW456L13_3176	0.68	-1.7
3,557,561	-		PfGW456L13_3176	0.68	-3.0
3,557,561	-		PfGW456L13_3176	0.68	+1.6
3,557,653	+		PfGW456L13_3176	0.71	+0.3
3,557,653	+		PfGW456L13_3176	0.71	-1.1
3,557,653	+		PfGW456L13_3176	0.71	-0.6
3,557,654	-		PfGW456L13_3176	0.71	-2.3
3,558,084	+		PfGW456L13_3176	0.86	+0.9
3,558,084	+		PfGW456L13_3176	0.86	+1.8
3,558,085	-		PfGW456L13_3176	0.86	+0.6
3,558,085	-		PfGW456L13_3176	0.86	+0.0
3,558,085	-		PfGW456L13_3176	0.86	+0.2
3,558,088	+		PfGW456L13_3176	0.86	-0.6
3,558,088	+		PfGW456L13_3176	0.86	+0.4
3,558,088	+		PfGW456L13_3176	0.86	+0.1
3,558,088	+		PfGW456L13_3176	0.86	-0.3
3,558,088	+		PfGW456L13_3176	0.86	-0.7
3,558,088	+		PfGW456L13_3176	0.86	-0.1
3,558,088	+		PfGW456L13_3176	0.86	+0.2
3,558,088	+		PfGW456L13_3176	0.86	+0.1
3,558,088	+		PfGW456L13_3176	0.86	+1.0
3,558,088	+		PfGW456L13_3176	0.86	+0.2
3,558,088	+		PfGW456L13_3176	0.86	+0.7
3,558,088	+		PfGW456L13_3176	0.86	-0.5
3,558,089	-		PfGW456L13_3176	0.86	-0.3
3,558,089	-		PfGW456L13_3176	0.86	+0.7
3,558,089	-		PfGW456L13_3176	0.86	-1.2
3,558,089	-		PfGW456L13_3176	0.86	-0.0
3,558,089	-		PfGW456L13_3176	0.86	+0.2
3,558,089	-		PfGW456L13_3176	0.86	+0.3
3,558,089	-		PfGW456L13_3176	0.86	-0.5
3,558,093	+		PfGW456L13_3176	0.86	-0.0
3,558,093	+		PfGW456L13_3176	0.86	-0.3
3,558,093	+		PfGW456L13_3176	0.86	-0.1
3,558,093	+		PfGW456L13_3176	0.86	-0.3
3,558,094	-		PfGW456L13_3176	0.86	+0.1
3,558,094	-		PfGW456L13_3176	0.86	+0.8
3,558,094	-		PfGW456L13_3176	0.86	+0.0
3,558,094	-		PfGW456L13_3176	0.86	-1.3
3,558,094	-		PfGW456L13_3176	0.86	-1.1
3,558,094	-		PfGW456L13_3176	0.86	+0.0
3,558,094	-		PfGW456L13_3176	0.86	-0.2
3,558,095	+		PfGW456L13_3176	0.86	-0.2
3,558,095	+		PfGW456L13_3176	0.86	-0.9
3,558,095	+		PfGW456L13_3176	0.86	+0.1
3,558,095	+		PfGW456L13_3176	0.86	+1.2
3,558,095	+		PfGW456L13_3176	0.86	+1.4
3,558,095	+		PfGW456L13_3176	0.86	+0.2
3,558,095	+		PfGW456L13_3176	0.86	-0.1
3,558,096	-		PfGW456L13_3176	0.86	-0.1
3,558,096	-		PfGW456L13_3176	0.86	+0.2
3,558,096	-		PfGW456L13_3176	0.86	-2.1
3,558,096	-		PfGW456L13_3176	0.86	+0.5
3,558,096	-		PfGW456L13_3176	0.86	-0.2
3,558,159	+		PfGW456L13_3176	0.88	+0.7
3,558,159	+		PfGW456L13_3176	0.88	+0.4
3,558,163	+		PfGW456L13_3176	0.88	+1.0
3,558,163	+		PfGW456L13_3176	0.88	-0.2
3,558,163	+		PfGW456L13_3176	0.88	+0.1
3,558,163	+		PfGW456L13_3176	0.88	-0.1
3,558,163	+		PfGW456L13_3176	0.88	+0.9
3,558,163	+		PfGW456L13_3176	0.88	-0.2
3,558,163	+		PfGW456L13_3176	0.88	+1.4
3,558,163	+		PfGW456L13_3176	0.88	+0.7
3,558,164	-		PfGW456L13_3176	0.88	+0.1
3,558,164	-		PfGW456L13_3176	0.88	-0.4
3,558,164	-		PfGW456L13_3176	0.88	+0.5
3,558,164	-		PfGW456L13_3176	0.88	+0.0
3,558,164	-		PfGW456L13_3176	0.88	+0.2
3,558,164	-		PfGW456L13_3176	0.88	-1.5
3,558,164	-		PfGW456L13_3176	0.88	+1.3
3,558,420	+				-0.3
3,558,435	+				+0.9
3,558,462	+				+0.3
3,558,474	+				-0.3
3,558,492	+				-0.2
3,558,528	+				-0.9
3,558,528	+				-0.7
3,558,528	+				+0.4
3,558,529	-				-1.3
3,558,529	-				-0.2
3,558,685	-		PfGW456L13_3177	0.83	+0.7
3,558,709	+				+1.2
3,558,709	+				+0.4
3,558,710	-				+0.6
3,558,710	-				-2.2
3,558,710	-				-1.5
3,558,710	-				+0.0
3,558,710	-				-1.0
3,558,710	-				+0.2
3,558,710	-				-0.3
3,558,710	-				+0.9
3,558,752	-				-0.1
3,558,768	+				-2.3
3,558,769	-				+1.2
3,558,789	+				-0.0
3,558,789	+				-0.9
3,558,789	+				-0.1
3,558,789	+				-0.3
3,558,790	-				+0.2
3,558,790	-				+1.3
3,558,790	-				-0.6
3,558,792	+				-1.6
3,558,792	+				-2.1
3,558,792	+				+0.1
3,558,792	+				-0.1
3,558,793	-				-0.7
3,558,793	-				-0.5
3,558,793	-				+0.2
3,558,793	-				-2.2
3,558,793	-				-0.2
3,558,930	+		PfGW456L13_3178	0.10	+2.1
3,558,931	-		PfGW456L13_3178	0.10	-0.2
3,558,960	+		PfGW456L13_3178	0.12	-0.5
3,558,960	+		PfGW456L13_3178	0.12	+1.3
3,558,961	-		PfGW456L13_3178	0.12	-0.4
3,559,068	-		PfGW456L13_3178	0.20	-0.8
3,559,121	+		PfGW456L13_3178	0.23	+0.2
3,559,121	+		PfGW456L13_3178	0.23	-1.1
3,559,121	+		PfGW456L13_3178	0.23	-0.1
3,559,122	-		PfGW456L13_3178	0.23	+1.2
3,559,122	-		PfGW456L13_3178	0.23	+1.4
3,559,122	-		PfGW456L13_3178	0.23	-1.0
3,559,308	+		PfGW456L13_3178	0.36	+0.8
3,559,308	+		PfGW456L13_3178	0.36	+0.4
3,559,308	+		PfGW456L13_3178	0.36	-0.7
3,559,309	-		PfGW456L13_3178	0.36	-0.1
3,559,309	-		PfGW456L13_3178	0.36	+2.1
3,559,309	-		PfGW456L13_3178	0.36	+0.1
3,559,309	-		PfGW456L13_3178	0.36	+0.4
3,559,462	+		PfGW456L13_3178	0.47	+0.4