Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_28315 and PS417_28320 are separated by 11 nucleotides PS417_28320 and PS417_28325 overlap by 4 nucleotides PS417_28325 and PS417_28330 overlap by 4 nucleotides PS417_28330 and PS417_28335 are separated by 3 nucleotides
PS417_28315: PS417_28315 - zinc ABC transporter permease, at 6,113,216 to 6,114,082
_28315
PS417_28320: PS417_28320 - metal ABC transporter substrate-binding protein, at 6,114,094 to 6,114,972
_28320
PS417_28325: PS417_28325 - phosphoribosyl-AMP cyclohydrolase, at 6,114,969 to 6,115,382
_28325
PS417_28330: PS417_28330 - carbonate dehydratase, at 6,115,379 to 6,115,939
_28330
PS417_28335: PS417_28335 - dihydroorotase, at 6,115,943 to 6,117,280
_28335
Position (kb)
6114
6115
6116 Strain fitness (log2 ratio)
-2
-1
0
1 at 6114.104 kb on + strand at 6114.264 kb on + strand, within PS417_28320 at 6114.265 kb on - strand, within PS417_28320 at 6114.265 kb on - strand, within PS417_28320 at 6114.265 kb on - strand, within PS417_28320 at 6114.265 kb on - strand, within PS417_28320 at 6114.265 kb on - strand, within PS417_28320 at 6114.568 kb on + strand, within PS417_28320 at 6114.584 kb on - strand, within PS417_28320 at 6114.875 kb on - strand, within PS417_28320 at 6114.932 kb on - strand at 6115.106 kb on - strand, within PS417_28325 at 6115.330 kb on - strand, within PS417_28325 at 6115.330 kb on - strand, within PS417_28325 at 6115.790 kb on + strand, within PS417_28330 at 6115.790 kb on + strand, within PS417_28330 at 6115.790 kb on + strand, within PS417_28330 at 6115.791 kb on - strand, within PS417_28330 at 6115.791 kb on - strand, within PS417_28330 at 6115.791 kb on - strand, within PS417_28330 at 6115.791 kb on - strand, within PS417_28330 at 6115.791 kb on - strand, within PS417_28330 at 6115.791 kb on - strand, within PS417_28330 at 6116.057 kb on + strand at 6116.057 kb on + strand at 6116.058 kb on - strand at 6116.058 kb on - strand at 6116.058 kb on - strand at 6116.166 kb on - strand, within PS417_28335 at 6116.198 kb on - strand, within PS417_28335 at 6116.300 kb on + strand, within PS417_28335 at 6116.300 kb on + strand, within PS417_28335 at 6116.300 kb on + strand, within PS417_28335 at 6116.300 kb on + strand, within PS417_28335 at 6116.301 kb on - strand, within PS417_28335 at 6116.301 kb on - strand, within PS417_28335 at 6116.301 kb on - strand, within PS417_28335 at 6116.319 kb on + strand, within PS417_28335 at 6116.320 kb on - strand, within PS417_28335
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 6,114,104 + -0.9 6,114,264 + PS417_28320 0.19 +0.7 6,114,265 - PS417_28320 0.19 -0.3 6,114,265 - PS417_28320 0.19 -0.9 6,114,265 - PS417_28320 0.19 +1.2 6,114,265 - PS417_28320 0.19 -0.2 6,114,265 - PS417_28320 0.19 -0.7 6,114,568 + PS417_28320 0.54 -0.7 6,114,584 - PS417_28320 0.56 -0.4 6,114,875 - PS417_28320 0.89 +0.3 6,114,932 - -1.7 6,115,106 - PS417_28325 0.33 -1.4 6,115,330 - PS417_28325 0.87 +0.0 6,115,330 - PS417_28325 0.87 -0.2 6,115,790 + PS417_28330 0.73 +0.8 6,115,790 + PS417_28330 0.73 -0.3 6,115,790 + PS417_28330 0.73 +0.3 6,115,791 - PS417_28330 0.73 +0.8 6,115,791 - PS417_28330 0.73 -0.1 6,115,791 - PS417_28330 0.73 -0.8 6,115,791 - PS417_28330 0.73 +1.1 6,115,791 - PS417_28330 0.73 -0.3 6,115,791 - PS417_28330 0.73 -1.8 6,116,057 + -0.4 6,116,057 + -0.2 6,116,058 - +0.6 6,116,058 - -0.3 6,116,058 - +0.1 6,116,166 - PS417_28335 0.17 -0.4 6,116,198 - PS417_28335 0.19 -1.2 6,116,300 + PS417_28335 0.27 +0.8 6,116,300 + PS417_28335 0.27 +0.1 6,116,300 + PS417_28335 0.27 -0.4 6,116,300 + PS417_28335 0.27 +1.1 6,116,301 - PS417_28335 0.27 -0.8 6,116,301 - PS417_28335 0.27 +0.2 6,116,301 - PS417_28335 0.27 -0.4 6,116,319 + PS417_28335 0.28 +0.6 6,116,320 - PS417_28335 0.28 +0.3
Or see this region's nucleotide sequence