Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27040 and PS417_27045 are separated by 63 nucleotides PS417_27045 and PS417_27050 are separated by 134 nucleotides PS417_27050 and PS417_27055 are separated by 37 nucleotides
PS417_27040: PS417_27040 - 3-phosphoglycerate dehydrogenase, at 5,839,290 to 5,840,519
_27040
PS417_27045: PS417_27045 - ATPase, at 5,840,583 to 5,841,023
_27045
PS417_27050: PS417_27050 - ABC transporter substrate-binding protein, at 5,841,158 to 5,841,652
_27050
PS417_27055: PS417_27055 - hypothetical protein, at 5,841,690 to 5,842,184
_27055
Position (kb) 5840
5841
5842 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 5839.828 kb on - strand, within PS417_27040 at 5840.233 kb on - strand, within PS417_27040 at 5840.233 kb on - strand, within PS417_27040 at 5840.584 kb on + strand at 5840.584 kb on + strand at 5840.588 kb on + strand at 5840.616 kb on + strand at 5840.616 kb on + strand at 5840.617 kb on - strand at 5840.910 kb on + strand, within PS417_27045 at 5840.910 kb on + strand, within PS417_27045 at 5840.910 kb on + strand, within PS417_27045 at 5840.911 kb on - strand, within PS417_27045 at 5841.104 kb on + strand at 5841.104 kb on + strand at 5841.148 kb on - strand at 5841.180 kb on + strand at 5841.180 kb on + strand at 5841.181 kb on - strand at 5841.234 kb on + strand, within PS417_27050 at 5841.234 kb on + strand, within PS417_27050 at 5841.234 kb on + strand, within PS417_27050 at 5841.234 kb on + strand, within PS417_27050 at 5841.235 kb on - strand, within PS417_27050 at 5841.373 kb on + strand, within PS417_27050 at 5841.376 kb on + strand, within PS417_27050 at 5841.376 kb on + strand, within PS417_27050 at 5841.377 kb on - strand at 5841.422 kb on + strand, within PS417_27050 at 5841.423 kb on - strand, within PS417_27050 at 5841.423 kb on - strand, within PS417_27050 at 5841.448 kb on + strand, within PS417_27050 at 5841.691 kb on + strand at 5841.692 kb on - strand at 5841.693 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 5,839,828 - PS417_27040 0.44 -0.9 5,840,233 - PS417_27040 0.77 -5.1 5,840,233 - PS417_27040 0.77 -2.2 5,840,584 + +0.1 5,840,584 + -0.6 5,840,588 + -0.9 5,840,616 + +0.5 5,840,616 + -1.0 5,840,617 - +1.8 5,840,910 + PS417_27045 0.74 -0.3 5,840,910 + PS417_27045 0.74 +0.1 5,840,910 + PS417_27045 0.74 +1.2 5,840,911 - PS417_27045 0.74 +0.3 5,841,104 + +0.2 5,841,104 + +0.4 5,841,148 - +1.0 5,841,180 + -0.5 5,841,180 + -0.6 5,841,181 - -0.1 5,841,234 + PS417_27050 0.15 +0.1 5,841,234 + PS417_27050 0.15 -0.4 5,841,234 + PS417_27050 0.15 +0.5 5,841,234 + PS417_27050 0.15 +2.1 5,841,235 - PS417_27050 0.16 +0.1 5,841,373 + PS417_27050 0.43 -0.3 5,841,376 + PS417_27050 0.44 -1.7 5,841,376 + PS417_27050 0.44 +1.8 5,841,377 - +1.1 5,841,422 + PS417_27050 0.53 -0.3 5,841,423 - PS417_27050 0.54 +0.1 5,841,423 - PS417_27050 0.54 +0.5 5,841,448 + PS417_27050 0.59 +0.1 5,841,691 + +0.3 5,841,692 - +0.2 5,841,693 + -0.8
Or see this region's nucleotide sequence