Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3465

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
4,102,256	+		Echvi_3463	0.38	-1.6
4,102,256	+		Echvi_3463	0.38	-0.7
4,102,257	-		Echvi_3463	0.38	+0.0
4,102,257	-		Echvi_3463	0.38	+0.8
4,102,323	+		Echvi_3463	0.50	+1.1
4,102,458	-		Echvi_3463	0.75	-0.5
4,102,564	+				-0.8
4,102,565	-				-0.7
4,102,565	-				+0.2
4,102,569	+				-0.1
4,102,569	+				+1.4
4,102,569	+				+1.8
4,102,569	+				-1.8
4,102,570	-				-2.4
4,102,570	-				+0.5
4,102,570	-				-1.1
4,102,571	+				+0.1
4,102,571	+				-1.5
4,102,571	+				-0.3
4,102,571	+				+2.3
4,102,571	+				+0.1
4,102,571	+				-0.4
4,102,571	+				-0.7
4,102,572	-				-0.1
4,102,572	-				-2.2
4,102,572	-				-0.5
4,102,572	-				-2.7
4,102,572	-				+0.0
4,102,572	-				+0.2
4,102,572	-				-0.9
4,102,572	-				-0.6
4,102,572	-				+1.0
4,102,577	+				-0.8
4,102,578	-				+0.1
4,102,596	+				-2.2
4,102,597	-				-0.5
4,102,597	-				+0.3
4,102,638	+				+0.8
4,102,639	-				+0.1
4,102,683	-		Echvi_3464	0.12	+0.5
4,102,713	-		Echvi_3464	0.17	-1.8
4,102,782	-		Echvi_3464	0.28	+0.6
4,102,811	+		Echvi_3464	0.33	-1.2
4,102,811	+		Echvi_3464	0.33	-0.2
4,102,811	+		Echvi_3464	0.33	+2.1
4,102,811	+		Echvi_3464	0.33	-1.9
4,102,811	+		Echvi_3464	0.33	+0.1
4,102,811	+		Echvi_3464	0.33	+0.4
4,102,811	+		Echvi_3464	0.33	+0.2
4,102,812	-		Echvi_3464	0.33	+0.1
4,102,812	-		Echvi_3464	0.33	-0.6
4,102,812	-		Echvi_3464	0.33	+1.5
4,102,834	+		Echvi_3464	0.37	+1.0
4,102,834	+		Echvi_3464	0.37	-0.2
4,102,834	+		Echvi_3464	0.37	-0.9
4,102,835	-		Echvi_3464	0.37	-0.2
4,102,835	-		Echvi_3464	0.37	-2.0
4,102,835	-		Echvi_3464	0.37	-0.1
4,102,835	-		Echvi_3464	0.37	+0.6
4,102,835	-		Echvi_3464	0.37	-0.1
4,102,837	-		Echvi_3464	0.37	-0.2
4,102,838	+		Echvi_3464	0.37	-1.7
4,102,838	+		Echvi_3464	0.37	-1.4
4,102,838	+		Echvi_3464	0.37	+0.2
4,102,839	-		Echvi_3464	0.37	+0.3
4,102,846	-		Echvi_3464	0.39	+0.2
4,102,865	-		Echvi_3464	0.42	+1.0
4,102,865	-		Echvi_3464	0.42	+0.7
4,102,869	-		Echvi_3464	0.42	+1.0
4,102,872	-		Echvi_3464	0.43	+0.3
4,102,872	-		Echvi_3464	0.43	+0.3
4,102,872	-		Echvi_3464	0.43	-1.1
4,102,875	+		Echvi_3464	0.43	+0.5
4,102,875	+		Echvi_3464	0.43	+0.7
4,102,876	-		Echvi_3464	0.44	-0.2
4,102,876	-		Echvi_3464	0.44	+0.4
4,102,876	-		Echvi_3464	0.44	-1.2
4,102,901	-		Echvi_3464	0.48	+0.9
4,102,907	+		Echvi_3464	0.49	-3.1
4,102,907	+		Echvi_3464	0.49	+1.2
4,102,908	-		Echvi_3464	0.49	-0.1
4,102,908	-		Echvi_3464	0.49	+0.2
4,102,911	+		Echvi_3464	0.49	+1.1
4,102,911	+		Echvi_3464	0.49	+1.0
4,102,911	+		Echvi_3464	0.49	-1.3
4,102,913	+		Echvi_3464	0.50	+1.3
4,102,978	+		Echvi_3464	0.60	+1.0
4,102,978	+		Echvi_3464	0.60	+0.8
4,102,979	-		Echvi_3464	0.61	+1.0
4,102,988	+		Echvi_3464	0.62	+2.8
4,102,989	-		Echvi_3464	0.62	-0.0
4,103,010	+		Echvi_3464	0.66	+0.1
4,103,011	-		Echvi_3464	0.66	-0.1
4,103,011	-		Echvi_3464	0.66	-0.1
4,103,011	-		Echvi_3464	0.66	+0.4
4,103,027	+		Echvi_3464	0.68	+0.6
4,103,028	-		Echvi_3464	0.69	+0.4
4,103,048	+		Echvi_3464	0.72	-0.0
4,103,048	+		Echvi_3464	0.72	-0.3
4,103,048	+		Echvi_3464	0.72	+1.2
4,103,067	+		Echvi_3464	0.75	-1.1
4,103,085	+		Echvi_3464	0.78	+3.1
4,103,086	-		Echvi_3464	0.78	+0.3
4,103,087	+		Echvi_3464	0.78	+1.0
4,103,087	+		Echvi_3464	0.78	-1.7
4,103,088	-		Echvi_3464	0.79	+0.3
4,103,123	+		Echvi_3464	0.84	-0.7
4,103,124	-		Echvi_3464	0.84	-0.4
4,103,180	-				+0.0
4,103,194	-				-0.5
4,103,221	+				+0.0
4,103,388	+		Echvi_3465	0.25	-0.2
4,103,388	+		Echvi_3465	0.25	+0.7
4,103,388	+		Echvi_3465	0.25	-0.7
4,103,425	+		Echvi_3465	0.30	-0.2
4,103,425	+		Echvi_3465	0.30	+0.6
4,103,427	+		Echvi_3465	0.31	+1.2
4,103,427	+		Echvi_3465	0.31	-0.4
4,103,427	+		Echvi_3465	0.31	+1.6
4,103,427	+		Echvi_3465	0.31	+0.1
4,103,428	-		Echvi_3465	0.31	+2.5
4,103,428	-		Echvi_3465	0.31	-1.1
4,103,428	-		Echvi_3465	0.31	-1.6
4,103,458	+		Echvi_3465	0.35	+0.6
4,103,459	-		Echvi_3465	0.35	+0.5
4,103,462	-		Echvi_3465	0.36	+1.7
4,103,467	+		Echvi_3465	0.36	+0.2
4,103,468	-		Echvi_3465	0.37	-0.1
4,103,556	-		Echvi_3465	0.50	-1.2
4,103,556	-		Echvi_3465	0.50	+2.3
4,103,556	-		Echvi_3465	0.50	+0.3
4,103,575	-		Echvi_3465	0.52	-1.4
4,103,580	+		Echvi_3465	0.53	-0.2
4,103,581	-		Echvi_3465	0.53	+0.2
4,103,581	-		Echvi_3465	0.53	+0.1
4,103,609	+		Echvi_3465	0.57	-0.3
4,103,609	+		Echvi_3465	0.57	+1.2
4,103,633	+		Echvi_3465	0.61	-0.8
4,103,712	+		Echvi_3465	0.73	-1.2
4,103,712	+		Echvi_3465	0.73	-0.7
4,103,713	-		Echvi_3465	0.73	-0.6
4,103,713	-		Echvi_3465	0.73	+0.5
4,103,734	+		Echvi_3465	0.76	+0.2
4,103,735	-		Echvi_3465	0.76	+0.2
4,103,744	-		Echvi_3465	0.77	-0.0
4,103,744	-		Echvi_3465	0.77	-0.4
4,103,803	+		Echvi_3465	0.86	+1.5
4,103,803	+		Echvi_3465	0.86	-1.7
4,103,804	-		Echvi_3465	0.86	-0.2
4,103,822	+		Echvi_3465	0.89	-0.5
4,103,822	+		Echvi_3465	0.89	+0.4
4,103,823	-		Echvi_3465	0.89	+0.5
4,103,823	-		Echvi_3465	0.89	-0.5
4,103,842	-				-2.4
4,103,846	+				-1.2
4,103,854	+				-0.4
4,103,868	-				+1.3
4,103,881	-				-0.4
4,103,881	-				+2.0
4,103,885	+				+1.6
4,103,886	-				-2.6
4,103,901	-				+0.2
4,103,909	-				+0.4
4,103,952	-				-0.5
4,103,970	-				+0.2
4,103,991	+				-0.2
4,103,991	+				+0.5
4,103,994	-				-1.6
4,104,003	-				+0.8
4,104,024	-				-1.2
4,104,034	+				-1.2
4,104,065	+				+0.4
4,104,079	+				-0.8
4,104,079	+				-2.9
4,104,080	-				-0.1
4,104,080	-				-1.1
4,104,104	-				+1.4
4,104,136	+				+1.2
4,104,136	+				-1.2
4,104,137	-				+0.3
4,104,148	+				+1.0
4,104,157	+				-0.8
4,104,157	+				+2.5
4,104,158	-				-1.3
4,104,161	+				-0.6
4,104,162	-				+0.4
4,104,193	-				+1.2
4,104,196	+				+0.6
4,104,248	+				-1.7
4,104,249	-				-0.9
4,104,258	+				+0.5
4,104,259	-				-1.6
4,104,290	+				+0.3
4,104,290	+				-0.7
4,104,290	+				+0.1
4,104,336	-				-0.9
4,104,369	-				+0.4
4,104,437	-		Echvi_3466	0.12	+0.2
4,104,474	+		Echvi_3466	0.13	+0.1
4,104,518	+		Echvi_3466	0.15	+1.8
4,104,545	-		Echvi_3466	0.16	+0.7
4,104,632	-		Echvi_3466	0.19	-1.2
4,104,661	+		Echvi_3466	0.21	-0.0
4,104,662	-		Echvi_3466	0.21	-0.1
4,104,779	+		Echvi_3466	0.25	-0.7
4,104,779	+		Echvi_3466	0.25	-0.5
4,104,779	+		Echvi_3466	0.25	+2.2
4,104,779	+		Echvi_3466	0.25	-2.2
4,104,780	-		Echvi_3466	0.25	+1.8
4,104,780	-		Echvi_3466	0.25	-0.1
4,104,780	-		Echvi_3466	0.25	-0.7
4,104,780	-		Echvi_3466	0.25	+0.2
4,104,830	+		Echvi_3466	0.27	-1.1
4,104,830	+		Echvi_3466	0.27	+0.5
4,104,830	+		Echvi_3466	0.27	-0.8
4,104,831	-		Echvi_3466	0.28	-0.2
4,104,845	+		Echvi_3466	0.28	-0.0
4,104,845	+		Echvi_3466	0.28	+1.0
4,104,845	+		Echvi_3466	0.28	-1.4
4,104,846	-		Echvi_3466	0.28	+0.4
4,104,846	-		Echvi_3466	0.28	-0.1
4,104,846	-		Echvi_3466	0.28	-1.1
4,104,865	+		Echvi_3466	0.29	+0.1
4,104,866	-		Echvi_3466	0.29	-1.5
4,104,866	-		Echvi_3466	0.29	+0.8
4,104,866	-		Echvi_3466	0.29	+0.0