Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3323

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
3,926,605	+				+1.1
3,926,606	-				+0.3
3,926,606	-				-2.4
3,926,671	+				-2.1
3,926,671	+				-0.4
3,926,672	-				+0.4
3,926,672	-				+1.8
3,926,714	+		Echvi_3322	0.12	-0.3
3,926,714	+		Echvi_3322	0.12	+1.8
3,926,721	+		Echvi_3322	0.14	-0.0
3,926,725	+		Echvi_3322	0.15	-0.3
3,926,735	+		Echvi_3322	0.17	+0.2
3,926,735	+		Echvi_3322	0.17	+0.1
3,926,736	-		Echvi_3322	0.17	+0.9
3,926,736	-		Echvi_3322	0.17	+0.6
3,926,747	+		Echvi_3322	0.19	+0.8
3,926,750	+		Echvi_3322	0.20	+1.3
3,926,750	+		Echvi_3322	0.20	-0.6
3,926,768	+		Echvi_3322	0.24	+0.5
3,926,768	+		Echvi_3322	0.24	+0.4
3,926,768	+		Echvi_3322	0.24	+0.5
3,926,769	-		Echvi_3322	0.24	+0.1
3,926,769	-		Echvi_3322	0.24	+0.9
3,926,769	-		Echvi_3322	0.24	+0.1
3,926,769	-		Echvi_3322	0.24	-0.1
3,926,830	-		Echvi_3322	0.37	-1.7
3,926,830	-		Echvi_3322	0.37	-2.1
3,926,861	+		Echvi_3322	0.44	-2.1
3,926,862	-		Echvi_3322	0.44	-0.2
3,926,903	+		Echvi_3322	0.53	-0.7
3,926,904	-		Echvi_3322	0.53	-0.6
3,926,973	-		Echvi_3322	0.68	-1.3
3,927,012	+		Echvi_3322	0.76	+1.3
3,927,012	+		Echvi_3322	0.76	-1.2
3,927,021	+		Echvi_3322	0.78	+0.1
3,927,099	-				+0.0
3,927,101	-				+0.2
3,927,101	-				+0.4
3,927,111	-				-1.0
3,927,113	+				-0.1
3,927,114	-				+0.3
3,927,114	-				-0.4
3,927,145	-				-1.9
3,927,148	+				-1.1
3,927,148	+				-0.0
3,927,149	-				+0.4
3,927,150	+				+0.1
3,927,151	-				-3.4
3,927,152	+				+0.6
3,927,152	+				+0.4
3,927,200	+				+0.3
3,927,211	+				+1.6
3,927,211	+				+1.2
3,927,211	+				-0.8
3,927,212	-				-0.2
3,927,252	+				+0.2
3,927,322	-				+0.1
3,927,325	+				+1.2
3,927,350	+				+1.4
3,927,392	-				+2.0
3,927,396	-				+0.3
3,927,396	-				-1.5
3,927,444	+				-0.4
3,927,451	+				-1.8
3,927,472	+				-0.9
3,927,485	+				+0.4
3,927,485	+				-0.8
3,927,485	+				+1.5
3,927,539	+				-0.7
3,927,539	+				-0.7
3,927,568	-				-0.3
3,927,568	-				-0.4
3,927,637	+		Echvi_3323	0.14	-0.4
3,927,638	-		Echvi_3323	0.14	-0.9
3,927,638	-		Echvi_3323	0.14	-1.6
3,927,638	-		Echvi_3323	0.14	-1.6
3,927,709	-		Echvi_3323	0.21	+2.5
3,927,709	-		Echvi_3323	0.21	-0.0
3,927,732	+		Echvi_3323	0.24	-0.4
3,927,733	-		Echvi_3323	0.24	-1.5
3,927,862	-		Echvi_3323	0.36	-0.6
3,927,862	-		Echvi_3323	0.36	+0.0
3,927,862	-		Echvi_3323	0.36	+0.7
3,927,863	+		Echvi_3323	0.36	-0.2
3,927,863	+		Echvi_3323	0.36	-1.8
3,927,863	+		Echvi_3323	0.36	-0.0
3,927,863	+		Echvi_3323	0.36	-0.9
3,927,863	+		Echvi_3323	0.36	+0.4
3,927,863	+		Echvi_3323	0.36	-0.2
3,927,864	-		Echvi_3323	0.36	+0.8
3,927,864	-		Echvi_3323	0.36	-1.6
3,927,864	-		Echvi_3323	0.36	-0.4
3,927,864	-		Echvi_3323	0.36	-1.0
3,927,864	-		Echvi_3323	0.36	-0.7
3,927,865	+		Echvi_3323	0.36	+0.4
3,927,865	+		Echvi_3323	0.36	-2.8
3,927,866	-		Echvi_3323	0.37	-0.8
3,927,898	+		Echvi_3323	0.40	+0.8
3,927,938	+		Echvi_3323	0.44	+0.1
3,927,942	-		Echvi_3323	0.44	+0.6
3,928,001	+		Echvi_3323	0.50	-2.2
3,928,017	+		Echvi_3323	0.51	-2.2
3,928,056	+		Echvi_3323	0.55	-1.1
3,928,083	+		Echvi_3323	0.58	-0.4
3,928,185	+		Echvi_3323	0.67	+1.2
3,928,185	+		Echvi_3323	0.67	-1.2
3,928,186	-		Echvi_3323	0.68	+0.7
3,928,186	-		Echvi_3323	0.68	+0.8
3,928,186	-		Echvi_3323	0.68	-0.3
3,928,188	+		Echvi_3323	0.68	+0.3
3,928,188	+		Echvi_3323	0.68	-0.7
3,928,190	+		Echvi_3323	0.68	+1.5
3,928,190	+		Echvi_3323	0.68	-2.2
3,928,190	+		Echvi_3323	0.68	-0.7
3,928,191	-		Echvi_3323	0.68	+0.8
3,928,191	-		Echvi_3323	0.68	+2.8
3,928,191	-		Echvi_3323	0.68	-1.2
3,928,245	-		Echvi_3323	0.73	-2.4
3,928,350	+		Echvi_3323	0.83	-0.7
3,928,350	+		Echvi_3323	0.83	-0.7
3,928,350	+		Echvi_3323	0.83	+0.8
3,928,351	-		Echvi_3323	0.84	-0.6
3,928,353	+		Echvi_3323	0.84	-1.0
3,928,353	+		Echvi_3323	0.84	-0.2
3,928,353	+		Echvi_3323	0.84	-0.8
3,928,366	+		Echvi_3323	0.85	+0.0
3,928,380	-		Echvi_3323	0.86	+2.2
3,928,380	-		Echvi_3323	0.86	+1.0
3,928,397	+		Echvi_3323	0.88	-1.2
3,928,398	-		Echvi_3323	0.88	+0.5
3,928,398	-		Echvi_3323	0.88	-0.4
3,928,398	-		Echvi_3323	0.88	+1.3
3,928,406	-		Echvi_3323	0.89	+0.6
3,928,424	+				+0.1
3,928,435	+				-1.7
3,928,436	-				+1.8
3,928,448	+				-2.0
3,928,458	+				-0.7
3,928,516	+				-1.5
3,928,517	-				-0.5
3,928,519	-				+1.0
3,928,519	-				-1.0
3,928,552	-				+1.0
3,928,552	-				+0.8
3,928,565	-				-0.3
3,928,565	-				+0.2
3,928,669	+				+0.6
3,928,669	+				-1.3
3,928,701	+				+1.4
3,928,701	+				+0.6
3,928,720	-				+0.9
3,928,765	+				+0.2
3,928,795	+				-0.6
3,928,795	+				+0.2
3,928,796	-				+0.6
3,928,843	+				+0.3
3,928,844	-				+0.6
3,928,882	-				-1.8
3,928,908	+		Echvi_3324	0.11	+0.9
3,929,105	-				-0.5
3,929,123	-				-0.9
3,929,146	-				-0.3
3,929,193	-				-0.8
3,929,229	+				-0.2
3,929,260	+				-0.7
3,929,280	+				-1.2
3,929,373	+		Echvi_3325	0.37	+0.8
3,929,397	+		Echvi_3325	0.48	+0.1
3,929,415	-		Echvi_3325	0.56	-1.0
3,929,428	-		Echvi_3325	0.62	+0.4
3,929,432	+		Echvi_3325	0.64	+0.6
3,929,433	-		Echvi_3325	0.64	+0.0
3,929,433	-		Echvi_3325	0.64	-0.1
3,929,504	+				-0.4