Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3080

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
3,674,680	+		Echvi_3079	0.43	-0.6
3,674,704	+		Echvi_3079	0.44	+0.0
3,674,705	-		Echvi_3079	0.44	+0.2
3,674,773	+		Echvi_3079	0.48	+1.2
3,674,792	+		Echvi_3079	0.49	-0.5
3,674,820	+		Echvi_3079	0.51	+1.0
3,674,821	-		Echvi_3079	0.51	-0.1
3,674,846	+		Echvi_3079	0.52	+0.2
3,674,847	-		Echvi_3079	0.53	-0.2
3,674,847	-		Echvi_3079	0.53	+0.9
3,674,847	-		Echvi_3079	0.53	-0.8
3,674,848	+		Echvi_3079	0.53	+0.8
3,674,953	+		Echvi_3079	0.59	-1.0
3,674,961	+		Echvi_3079	0.59	-0.2
3,674,961	+		Echvi_3079	0.59	-0.8
3,674,961	+		Echvi_3079	0.59	-0.1
3,674,961	+		Echvi_3079	0.59	-0.7
3,674,962	-		Echvi_3079	0.59	-0.4
3,674,962	-		Echvi_3079	0.59	+0.6
3,674,962	-		Echvi_3079	0.59	-0.4
3,674,962	-		Echvi_3079	0.59	-0.0
3,674,962	-		Echvi_3079	0.59	+1.7
3,674,963	+		Echvi_3079	0.59	-0.7
3,674,963	+		Echvi_3079	0.59	-0.9
3,674,963	+		Echvi_3079	0.59	+0.3
3,674,964	-		Echvi_3079	0.59	-1.4
3,675,063	+		Echvi_3079	0.65	-1.2
3,675,063	+		Echvi_3079	0.65	+0.7
3,675,113	-		Echvi_3079	0.68	-0.9
3,675,113	-		Echvi_3079	0.68	-1.8
3,675,127	+		Echvi_3079	0.69	+1.2
3,675,128	-		Echvi_3079	0.69	-0.6
3,675,128	-		Echvi_3079	0.69	+1.0
3,675,128	-		Echvi_3079	0.69	+1.9
3,675,275	-		Echvi_3079	0.78	+0.9
3,675,275	-		Echvi_3079	0.78	-0.4
3,675,278	+		Echvi_3079	0.78	+1.1
3,675,278	+		Echvi_3079	0.78	+0.4
3,675,278	+		Echvi_3079	0.78	-0.2
3,675,279	-		Echvi_3079	0.78	+0.8
3,675,279	-		Echvi_3079	0.78	+1.8
3,675,397	+		Echvi_3079	0.85	-0.6
3,675,442	-		Echvi_3079	0.88	+0.9
3,675,442	-		Echvi_3079	0.88	+1.0
3,675,473	+		Echvi_3079	0.89	+0.4
3,675,473	+		Echvi_3079	0.89	+0.4
3,675,474	-		Echvi_3079	0.89	+1.8
3,675,474	-		Echvi_3079	0.89	+0.7
3,675,564	+				+0.9
3,675,565	-				+1.1
3,675,639	+				-0.6
3,675,639	+				-0.4
3,675,640	-				+0.6
3,675,650	+				-0.6
3,675,651	-				+1.5
3,675,651	-				+0.3
3,675,651	-				-0.5
3,675,660	+				+1.3
3,675,660	+				+0.8
3,675,661	-				+0.9
3,675,661	-				+0.2
3,675,666	-				-0.2
3,675,747	+		Echvi_3080	0.12	-1.0
3,675,774	+		Echvi_3080	0.16	+1.0
3,675,829	+		Echvi_3080	0.23	-1.9
3,675,873	+		Echvi_3080	0.29	+1.2
3,675,920	-		Echvi_3080	0.35	-0.6
3,675,943	+		Echvi_3080	0.38	+0.4
3,675,967	-		Echvi_3080	0.41	-1.1
3,676,024	-		Echvi_3080	0.49	+0.8
3,676,024	-		Echvi_3080	0.49	-0.9
3,676,039	+		Echvi_3080	0.51	+0.2
3,676,054	+		Echvi_3080	0.53	-2.6
3,676,055	-		Echvi_3080	0.53	-0.2
3,676,141	+		Echvi_3080	0.64	-3.2
3,676,174	+		Echvi_3080	0.69	+0.4
3,676,175	-		Echvi_3080	0.69	-0.1
3,676,175	-		Echvi_3080	0.69	+0.6
3,676,176	+		Echvi_3080	0.69	-0.2
3,676,177	-		Echvi_3080	0.69	+1.4
3,676,177	-		Echvi_3080	0.69	+0.3
3,676,177	-		Echvi_3080	0.69	-1.9
3,676,177	-		Echvi_3080	0.69	-1.1
3,676,196	+		Echvi_3080	0.72	-1.3
3,676,279	+		Echvi_3080	0.83	-1.8
3,676,319	+		Echvi_3080	0.88	-0.5
3,676,320	-		Echvi_3080	0.88	-0.7
3,676,320	-		Echvi_3080	0.88	-0.5
3,676,320	-		Echvi_3080	0.88	-0.1
3,676,320	-		Echvi_3080	0.88	+0.1
3,676,409	-				+0.4
3,676,409	-				+0.2
3,676,426	+				-0.1
3,676,427	-				+1.1
3,676,458	+				-1.2
3,676,494	+				-0.4
3,676,509	-				-1.3
3,676,515	-				-0.9
3,676,528	+				+0.7
3,676,529	-				-0.4
3,676,542	-				-0.0
3,676,558	-				-0.3
3,676,558	-				-0.2
3,676,558	-				+0.8
3,676,558	-				-0.2
3,676,587	+				+0.7
3,676,587	+				-0.2
3,676,587	+				-0.5
3,676,588	-				+0.3
3,676,606	+				+0.9
3,676,624	+				+1.3
3,676,625	-				-1.4
3,676,653	-		Echvi_3081	0.11	+1.1
3,676,682	+		Echvi_3081	0.14	+0.8
3,676,684	+		Echvi_3081	0.14	+1.1
3,676,694	+		Echvi_3081	0.16	-1.2
3,676,712	+		Echvi_3081	0.18	-1.9
3,676,712	+		Echvi_3081	0.18	-1.1
3,676,714	+		Echvi_3081	0.18	+0.0
3,676,715	-		Echvi_3081	0.18	-0.7
3,676,715	-		Echvi_3081	0.18	-0.3
3,676,715	-		Echvi_3081	0.18	-0.5
3,676,782	+		Echvi_3081	0.26	+1.0
3,676,782	+		Echvi_3081	0.26	-0.5
3,676,782	+		Echvi_3081	0.26	-0.0
3,676,782	+		Echvi_3081	0.26	+0.6
3,676,782	+		Echvi_3081	0.26	+0.3
3,676,816	+		Echvi_3081	0.31	+0.3
3,676,892	+		Echvi_3081	0.40	+0.9
3,676,893	-		Echvi_3081	0.40	+0.9
3,676,893	-		Echvi_3081	0.40	+0.6
3,676,895	-		Echvi_3081	0.40	-1.8
3,676,940	-		Echvi_3081	0.46	+0.4
3,676,940	-		Echvi_3081	0.46	+0.5
3,676,940	-		Echvi_3081	0.46	+1.1
3,676,990	+		Echvi_3081	0.52	-2.8
3,676,998	-		Echvi_3081	0.53	+0.2
3,677,072	+		Echvi_3081	0.62	-1.4
3,677,104	-		Echvi_3081	0.66	-0.3
3,677,114	+		Echvi_3081	0.67	-1.2
3,677,114	+		Echvi_3081	0.67	-0.2
3,677,114	+		Echvi_3081	0.67	-0.2
3,677,115	-		Echvi_3081	0.67	+0.8
3,677,115	-		Echvi_3081	0.67	-0.5
3,677,117	+		Echvi_3081	0.67	-1.1
3,677,117	+		Echvi_3081	0.67	-1.1
3,677,117	+		Echvi_3081	0.67	-0.2
3,677,118	-		Echvi_3081	0.67	+2.0
3,677,118	-		Echvi_3081	0.67	-0.3
3,677,118	-		Echvi_3081	0.67	+0.8
3,677,120	-		Echvi_3081	0.68	+1.0
3,677,164	-		Echvi_3081	0.73	+0.5
3,677,213	+		Echvi_3081	0.79	+3.3
3,677,213	+		Echvi_3081	0.79	+0.8
3,677,213	+		Echvi_3081	0.79	+1.2
3,677,228	+		Echvi_3081	0.81	+0.2
3,677,279	-		Echvi_3081	0.87	+0.1
3,677,333	+				+0.2
3,677,391	-				-0.8