Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2965

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
3,541,265	+				+0.2
3,541,266	-				-1.0
3,541,274	-				+0.2
3,541,300	+				-0.2
3,541,385	+				+0.4
3,541,385	+				+0.0
3,541,386	-				-1.0
3,541,442	+				-0.2
3,541,443	-				-0.8
3,541,516	-				+0.7
3,541,520	+				-0.1
3,541,556	-		Echvi_2964	0.13	-0.2
3,541,577	+		Echvi_2964	0.17	-1.6
3,541,577	+		Echvi_2964	0.17	-0.4
3,541,577	+		Echvi_2964	0.17	+2.2
3,541,577	+		Echvi_2964	0.17	+0.1
3,541,577	+		Echvi_2964	0.17	-1.0
3,541,578	-		Echvi_2964	0.17	-1.9
3,541,578	-		Echvi_2964	0.17	+1.4
3,541,582	+		Echvi_2964	0.18	+1.9
3,541,582	+		Echvi_2964	0.18	-0.6
3,541,595	-		Echvi_2964	0.20	-2.0
3,541,595	-		Echvi_2964	0.20	-0.5
3,541,598	+		Echvi_2964	0.20	+0.6
3,541,598	+		Echvi_2964	0.20	+2.0
3,541,599	-		Echvi_2964	0.21	-1.0
3,541,626	-		Echvi_2964	0.25	+1.3
3,541,633	+		Echvi_2964	0.26	+1.3
3,541,648	+		Echvi_2964	0.29	+0.6
3,541,667	+		Echvi_2964	0.32	+0.2
3,541,668	-		Echvi_2964	0.32	-1.1
3,541,685	+		Echvi_2964	0.35	+0.4
3,541,766	+		Echvi_2964	0.49	+0.9
3,541,766	+		Echvi_2964	0.49	-0.9
3,541,767	-		Echvi_2964	0.49	-0.4
3,541,767	-		Echvi_2964	0.49	-0.1
3,541,808	-		Echvi_2964	0.56	+0.9
3,541,820	-		Echvi_2964	0.58	-1.2
3,541,821	+		Echvi_2964	0.58	+0.3
3,541,821	+		Echvi_2964	0.58	+1.0
3,541,821	+		Echvi_2964	0.58	-0.4
3,541,872	-		Echvi_2964	0.67	-0.9
3,541,877	+		Echvi_2964	0.68	-2.2
3,541,878	-		Echvi_2964	0.68	+1.3
3,541,882	-		Echvi_2964	0.69	-0.8
3,541,919	+		Echvi_2964	0.75	+1.8
3,541,920	-		Echvi_2964	0.75	-0.6
3,541,982	+		Echvi_2964	0.86	+1.2
3,541,982	+		Echvi_2964	0.86	+1.0
3,541,982	+		Echvi_2964	0.86	+0.7
3,542,071	+				+0.5
3,542,099	-				-2.0
3,542,107	-				-1.2
3,542,110	-				-0.6
3,542,126	-				+1.1
3,542,140	-				+1.8
3,542,150	-				-2.3
3,542,150	-				-2.1
3,542,168	-				-0.8
3,542,168	-				+0.2
3,542,185	+				+0.6
3,542,265	+				-0.3
3,542,265	+				+0.3
3,542,303	-				-1.4
3,542,303	-				-0.9
3,542,344	-				+0.3
3,542,344	-				-2.2
3,542,366	-				-1.4
3,542,367	+				+0.6
3,542,368	-				+0.2
3,542,377	+		Echvi_2965	0.10	+0.1
3,542,377	+		Echvi_2965	0.10	-0.5
3,542,381	+		Echvi_2965	0.11	+0.3
3,542,381	+		Echvi_2965	0.11	+0.3
3,542,382	-		Echvi_2965	0.11	+0.7
3,542,417	-		Echvi_2965	0.14	-0.3
3,542,417	-		Echvi_2965	0.14	-0.6
3,542,506	-		Echvi_2965	0.22	-0.0
3,542,516	-		Echvi_2965	0.23	-0.7
3,542,516	-		Echvi_2965	0.23	+0.6
3,542,516	-		Echvi_2965	0.23	+1.8
3,542,635	+		Echvi_2965	0.34	-0.7
3,542,635	+		Echvi_2965	0.34	-0.4
3,542,636	-		Echvi_2965	0.34	-1.8
3,542,637	+		Echvi_2965	0.34	+0.0
3,542,637	+		Echvi_2965	0.34	-0.0
3,542,638	-		Echvi_2965	0.34	+0.9
3,542,655	-		Echvi_2965	0.35	-0.2
3,542,659	+		Echvi_2965	0.36	-0.7
3,542,721	-		Echvi_2965	0.41	-0.8
3,542,722	+		Echvi_2965	0.41	+0.4
3,542,722	+		Echvi_2965	0.41	-0.2
3,542,722	+		Echvi_2965	0.41	-0.1
3,542,723	-		Echvi_2965	0.41	+1.0
3,542,726	+		Echvi_2965	0.42	-0.1
3,542,726	+		Echvi_2965	0.42	+2.1
3,542,727	-		Echvi_2965	0.42	+0.1
3,542,727	-		Echvi_2965	0.42	+0.5
3,542,737	-		Echvi_2965	0.43	+0.7
3,542,776	+		Echvi_2965	0.46	+0.3
3,542,870	+		Echvi_2965	0.55	+0.4
3,542,870	+		Echvi_2965	0.55	-0.2
3,542,873	+		Echvi_2965	0.55	+0.8
3,542,875	+		Echvi_2965	0.55	+0.4
3,542,875	+		Echvi_2965	0.55	-0.7
3,542,875	+		Echvi_2965	0.55	-1.7
3,542,876	-		Echvi_2965	0.55	+0.9
3,542,876	-		Echvi_2965	0.55	-0.6
3,542,876	-		Echvi_2965	0.55	-0.8
3,542,876	-		Echvi_2965	0.55	+0.5
3,542,906	+		Echvi_2965	0.58	-0.1
3,542,906	+		Echvi_2965	0.58	+1.8
3,542,906	+		Echvi_2965	0.58	-0.1
3,542,906	+		Echvi_2965	0.58	-1.5
3,542,907	-		Echvi_2965	0.58	+1.8
3,542,907	-		Echvi_2965	0.58	+1.5
3,542,907	-		Echvi_2965	0.58	-1.0
3,542,907	-		Echvi_2965	0.58	+0.3
3,542,911	-		Echvi_2965	0.58	-1.2
3,542,911	-		Echvi_2965	0.58	-0.9
3,542,911	-		Echvi_2965	0.58	-0.2
3,543,008	+		Echvi_2965	0.67	+0.9
3,543,013	+		Echvi_2965	0.68	+1.1
3,543,014	-		Echvi_2965	0.68	+0.0
3,543,025	+		Echvi_2965	0.69	+0.9
3,543,026	-		Echvi_2965	0.69	+0.5
3,543,069	-		Echvi_2965	0.73	-0.8
3,543,069	-		Echvi_2965	0.73	-0.8
3,543,079	+		Echvi_2965	0.74	-0.4
3,543,080	-		Echvi_2965	0.74	-1.1
3,543,113	+		Echvi_2965	0.77	+0.8
3,543,142	+		Echvi_2965	0.79	+0.2
3,543,162	+		Echvi_2965	0.81	-0.4
3,543,163	-		Echvi_2965	0.81	-1.0
3,543,165	-		Echvi_2965	0.81	+1.0
3,543,165	-		Echvi_2965	0.81	-1.2
3,543,167	+		Echvi_2965	0.82	-1.1
3,543,167	+		Echvi_2965	0.82	+0.2
3,543,168	-		Echvi_2965	0.82	+0.3
3,543,168	-		Echvi_2965	0.82	-0.7
3,543,173	+		Echvi_2965	0.82	+0.6
3,543,227	-		Echvi_2965	0.87	-0.4
3,543,231	+		Echvi_2965	0.87	-1.0
3,543,231	+		Echvi_2965	0.87	-2.4
3,543,232	-		Echvi_2965	0.87	+0.3
3,543,247	+		Echvi_2965	0.89	+2.0
3,543,247	+		Echvi_2965	0.89	+0.1
3,543,248	-		Echvi_2965	0.89	-0.5
3,543,282	-				-1.1
3,543,315	-				-1.0
3,543,322	+				+0.4
3,543,353	-				+0.6
3,543,397	-				+1.2
3,543,419	-				+0.2
3,543,466	-				-0.4
3,543,472	+				-0.0
3,543,506	-				-0.5
3,543,506	-				+0.1
3,543,518	+				-1.7
3,543,535	-				+0.3
3,543,599	-				+0.6
3,543,666	+		Echvi_2966	0.16	-0.3
3,543,666	+		Echvi_2966	0.16	+0.3
3,543,669	+		Echvi_2966	0.16	+0.7
3,543,670	-		Echvi_2966	0.16	-0.3
3,543,673	-		Echvi_2966	0.17	-1.7
3,543,675	+		Echvi_2966	0.17	-1.3
3,543,675	+		Echvi_2966	0.17	+0.8
3,543,676	-		Echvi_2966	0.17	-0.4
3,543,688	+		Echvi_2966	0.18	+1.6
3,543,688	+		Echvi_2966	0.18	+0.5
3,543,689	-		Echvi_2966	0.18	+0.1
3,543,706	-		Echvi_2966	0.20	-0.4
3,543,710	-		Echvi_2966	0.20	-0.1
3,543,718	-		Echvi_2966	0.21	-0.8
3,543,751	-		Echvi_2966	0.24	-0.3
3,543,782	-		Echvi_2966	0.27	-0.1
3,543,800	-		Echvi_2966	0.29	-0.4
3,543,813	+		Echvi_2966	0.30	+2.3
3,543,814	-		Echvi_2966	0.30	-0.4
3,543,814	-		Echvi_2966	0.30	+1.2
3,543,844	+		Echvi_2966	0.33	+0.2
3,543,850	-		Echvi_2966	0.34	-1.2
3,543,865	+		Echvi_2966	0.35	-1.9
3,543,866	-		Echvi_2966	0.35	-0.4
3,543,886	+		Echvi_2966	0.37	+0.9
3,543,939	-		Echvi_2966	0.42	-0.9
3,543,986	+		Echvi_2966	0.47	-0.7
3,543,987	-		Echvi_2966	0.47	-0.0
3,543,987	-		Echvi_2966	0.47	-0.4
3,543,987	-		Echvi_2966	0.47	+1.3
3,543,987	-		Echvi_2966	0.47	-0.8
3,543,987	-		Echvi_2966	0.47	-0.8
3,544,010	-		Echvi_2966	0.49	-1.2
3,544,060	+		Echvi_2966	0.54	-1.3
3,544,062	+		Echvi_2966	0.54	+2.8
3,544,062	+		Echvi_2966	0.54	+0.8
3,544,128	-		Echvi_2966	0.60	-1.5
3,544,158	+		Echvi_2966	0.63	+0.2
3,544,158	+		Echvi_2966	0.63	-2.0
3,544,159	-		Echvi_2966	0.63	+0.8
3,544,159	-		Echvi_2966	0.63	+0.0
3,544,159	-		Echvi_2966	0.63	-0.9
3,544,173	-		Echvi_2966	0.65	+1.0
3,544,203	+		Echvi_2966	0.68	+0.9
3,544,207	+		Echvi_2966	0.68	+1.4
3,544,228	+		Echvi_2966	0.70	-0.2
3,544,228	+		Echvi_2966	0.70	-0.0
3,544,229	-		Echvi_2966	0.70	-1.4
3,544,229	-		Echvi_2966	0.70	+0.2
3,544,229	-		Echvi_2966	0.70	-0.2
3,544,265	-		Echvi_2966	0.74	-0.9
3,544,278	+		Echvi_2966	0.75	-0.1
3,544,317	-		Echvi_2966	0.79	-0.1
3,544,339	+		Echvi_2966	0.81	+0.3
3,544,357	+		Echvi_2966	0.82	-0.2
3,544,358	-		Echvi_2966	0.83	-1.2