Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1681

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
1,967,610	+		Echvi_1680	0.55	-2.3
1,967,610	+		Echvi_1680	0.55	+0.6
1,967,612	+		Echvi_1680	0.55	-0.7
1,967,612	+		Echvi_1680	0.55	-1.3
1,967,612	+		Echvi_1680	0.55	-0.9
1,967,612	+		Echvi_1680	0.55	-0.7
1,967,612	+		Echvi_1680	0.55	-0.0
1,967,612	+		Echvi_1680	0.55	+0.6
1,967,612	+		Echvi_1680	0.55	-0.9
1,967,612	+		Echvi_1680	0.55	-0.7
1,967,612	+		Echvi_1680	0.55	+0.1
1,967,612	+		Echvi_1680	0.55	-1.2
1,967,612	+		Echvi_1680	0.55	+0.9
1,967,612	+		Echvi_1680	0.55	-2.4
1,967,613	-		Echvi_1680	0.56	+0.9
1,967,613	-		Echvi_1680	0.56	-0.7
1,967,613	-		Echvi_1680	0.56	-0.1
1,967,613	-		Echvi_1680	0.56	-1.4
1,967,613	-		Echvi_1680	0.56	-3.0
1,967,613	-		Echvi_1680	0.56	+0.8
1,967,613	-		Echvi_1680	0.56	-0.7
1,967,613	-		Echvi_1680	0.56	-0.1
1,967,617	+		Echvi_1680	0.56	-0.9
1,967,617	+		Echvi_1680	0.56	+1.3
1,967,617	+		Echvi_1680	0.56	-0.5
1,967,617	+		Echvi_1680	0.56	-0.7
1,967,617	+		Echvi_1680	0.56	-2.8
1,967,617	+		Echvi_1680	0.56	-0.9
1,967,618	-		Echvi_1680	0.56	+1.7
1,967,618	-		Echvi_1680	0.56	-0.2
1,967,618	-		Echvi_1680	0.56	-0.6
1,967,618	-		Echvi_1680	0.56	-2.9
1,967,618	-		Echvi_1680	0.56	-1.4
1,967,618	-		Echvi_1680	0.56	+0.5
1,967,656	+		Echvi_1680	0.58	+1.7
1,967,656	+		Echvi_1680	0.58	+1.3
1,967,656	+		Echvi_1680	0.58	+2.9
1,967,656	+		Echvi_1680	0.58	-0.0
1,967,657	-		Echvi_1680	0.58	+0.5
1,967,657	-		Echvi_1680	0.58	-0.8
1,967,657	-		Echvi_1680	0.58	+0.2
1,967,659	-		Echvi_1680	0.58	+0.9
1,967,659	-		Echvi_1680	0.58	+0.7
1,967,659	-		Echvi_1680	0.58	+1.0
1,967,775	+		Echvi_1680	0.66	-0.5
1,967,776	-		Echvi_1680	0.66	+0.9
1,967,788	+		Echvi_1680	0.67	+0.2
1,967,789	-		Echvi_1680	0.67	+0.3
1,967,868	-		Echvi_1680	0.72	+0.1
1,967,902	-		Echvi_1680	0.74	-0.1
1,967,978	+		Echvi_1680	0.79	-1.5
1,968,054	-		Echvi_1680	0.83	-1.9
1,968,059	+		Echvi_1680	0.84	-0.2
1,968,060	-		Echvi_1680	0.84	+0.5
1,968,098	-		Echvi_1680	0.86	-1.3
1,968,134	-		Echvi_1680	0.88	+2.9
1,968,135	+		Echvi_1680	0.88	+1.9
1,968,136	-		Echvi_1680	0.88	+0.0
1,968,175	+				-0.2
1,968,206	+				-0.8
1,968,206	+				+0.3
1,968,207	-				+2.2
1,968,207	-				+2.7
1,968,210	+				-1.5
1,968,261	-				+0.6
1,968,281	+				-2.1
1,968,295	+				+0.9
1,968,295	+				+0.0
1,968,295	+				+0.0
1,968,296	-				+1.9
1,968,296	-				-1.4
1,968,296	-				-1.7
1,968,296	-				-0.1
1,968,296	-				+0.9
1,968,296	-				-1.4
1,968,307	-				+0.6
1,968,330	+				-0.4
1,968,392	+				+1.1
1,968,413	+				+0.2
1,968,414	-				+1.2
1,968,414	-				-1.2
1,968,432	+				-0.4
1,968,433	-				+0.8
1,968,434	+				+0.1
1,968,434	+				+0.3
1,968,435	-				-0.4
1,968,464	-				+0.5
1,968,472	+				+0.5
1,968,504	+				+1.6
1,968,507	+				+0.5
1,968,544	+				+0.8
1,968,591	+				-0.2
1,968,591	+				+0.1
1,968,616	+				+0.4
1,968,640	-				+0.3
1,968,641	+				-2.0
1,968,641	+				+0.4
1,968,803	-				-0.3
1,968,867	+		Echvi_1681	0.12	+1.2
1,968,871	+		Echvi_1681	0.12	+0.5
1,968,871	+		Echvi_1681	0.12	+0.3
1,968,872	-		Echvi_1681	0.12	+0.4
1,968,872	-		Echvi_1681	0.12	+1.3
1,968,888	+		Echvi_1681	0.13	+0.1
1,968,889	-		Echvi_1681	0.13	-2.8
1,969,019	-		Echvi_1681	0.19	+0.2
1,969,203	-		Echvi_1681	0.27	+0.8
1,969,256	-		Echvi_1681	0.30	-0.8
1,969,256	-		Echvi_1681	0.30	+0.0
1,969,256	-		Echvi_1681	0.30	+0.7
1,969,256	-		Echvi_1681	0.30	+0.5
1,969,257	+		Echvi_1681	0.30	+1.5
1,969,297	-		Echvi_1681	0.32	+0.5
1,969,300	+		Echvi_1681	0.32	+0.7
1,969,301	-		Echvi_1681	0.32	-0.5
1,969,301	-		Echvi_1681	0.32	-0.8
1,969,301	-		Echvi_1681	0.32	+2.2
1,969,340	-		Echvi_1681	0.34	-0.8
1,969,424	+		Echvi_1681	0.37	+0.3
1,969,448	+		Echvi_1681	0.39	+1.7
1,969,453	+		Echvi_1681	0.39	+1.3
1,969,453	+		Echvi_1681	0.39	+0.3
1,969,454	-		Echvi_1681	0.39	-1.1
1,969,454	-		Echvi_1681	0.39	+0.5
1,969,472	+		Echvi_1681	0.40	+0.3
1,969,473	-		Echvi_1681	0.40	-2.4
1,969,473	-		Echvi_1681	0.40	+1.1
1,969,473	-		Echvi_1681	0.40	-1.2
1,969,475	-		Echvi_1681	0.40	-0.0
1,969,475	-		Echvi_1681	0.40	-1.7
1,969,480	+		Echvi_1681	0.40	-1.1
1,969,480	+		Echvi_1681	0.40	+1.3
1,969,480	+		Echvi_1681	0.40	+0.2
1,969,480	+		Echvi_1681	0.40	+0.2
1,969,480	+		Echvi_1681	0.40	+0.4
1,969,557	+		Echvi_1681	0.44	-2.1
1,969,557	+		Echvi_1681	0.44	-0.2
1,969,557	+		Echvi_1681	0.44	+0.5
1,969,558	-		Echvi_1681	0.44	-0.5
1,969,654	+		Echvi_1681	0.48	+0.9
1,969,657	+		Echvi_1681	0.48	+0.3
1,969,657	+		Echvi_1681	0.48	-2.2
1,969,657	+		Echvi_1681	0.48	-0.6
1,969,658	-		Echvi_1681	0.48	-1.3
1,969,737	+		Echvi_1681	0.52	+0.2
1,969,737	+		Echvi_1681	0.52	-1.2
1,969,738	-		Echvi_1681	0.52	-0.8
1,969,784	-		Echvi_1681	0.54	-1.7
1,969,784	-		Echvi_1681	0.54	-1.0
1,969,787	-		Echvi_1681	0.54	-2.4
1,969,787	-		Echvi_1681	0.54	-0.4
1,969,787	-		Echvi_1681	0.54	-0.8
1,969,793	-		Echvi_1681	0.54	+0.1
1,969,825	+		Echvi_1681	0.56	+0.8
1,969,914	+		Echvi_1681	0.60	+0.3
1,970,158	+		Echvi_1681	0.71	+0.2
1,970,159	-		Echvi_1681	0.71	+1.0
1,970,159	-		Echvi_1681	0.71	-0.0
1,970,266	+		Echvi_1681	0.76	+0.1
1,970,266	+		Echvi_1681	0.76	-0.9
1,970,267	-		Echvi_1681	0.76	+0.5
1,970,267	-		Echvi_1681	0.76	+0.7
1,970,428	+		Echvi_1681	0.83	-0.2
1,970,497	+		Echvi_1681	0.86	+1.7
1,970,500	+		Echvi_1681	0.86	+0.2
1,970,500	+		Echvi_1681	0.86	+2.3
1,970,501	-		Echvi_1681	0.87	-0.2
1,970,510	+		Echvi_1681	0.87	-1.2
1,970,540	-		Echvi_1681	0.88	+0.3
1,970,673	-				+1.0
1,970,715	+				+0.1
1,970,767	+				+0.6
1,970,767	+				+1.9
1,970,767	+				+1.5
1,970,767	+				+0.5
1,970,768	-				+0.2
1,970,768	-				-0.6
1,970,768	-				-0.8
1,970,779	+				+0.2
1,970,779	+				-0.1
1,970,780	-				-1.4
1,970,780	-				+0.3
1,970,782	-				+0.2
1,970,782	-				+0.4
1,970,782	-				+1.1
1,970,811	-				+1.4
1,970,845	-				-0.7
1,970,845	-				-0.2
1,970,923	+				+0.7
1,970,968	-				+0.5
1,970,997	+				-1.4
1,970,997	+				+0.4
1,970,998	-				+1.3
1,971,038	+				-0.6
1,971,081	-				-1.1
1,971,106	-				+1.1
1,971,120	+				-0.4
1,971,120	+				-0.2
1,971,147	+				-1.8
1,971,147	+				-1.2
1,971,212	+				+0.9
1,971,212	+				+1.4
1,971,212	+				-2.4
1,971,218	-				+0.3
1,971,343	+				-0.5
1,971,357	-				-0.7
1,971,409	+				+0.1
1,971,409	+				-2.4
1,971,416	-		Echvi_1682	0.10	+0.3
1,971,416	-		Echvi_1682	0.10	+1.9
1,971,416	-		Echvi_1682	0.10	-0.2
1,971,416	-		Echvi_1682	0.10	+0.2
1,971,448	-		Echvi_1682	0.11	+0.2
1,971,522	+		Echvi_1682	0.14	-0.6
1,971,523	-		Echvi_1682	0.14	+1.2
1,971,523	-		Echvi_1682	0.14	-1.1
1,971,523	-		Echvi_1682	0.14	+0.9
1,971,550	-		Echvi_1682	0.15	+1.3
1,971,554	-		Echvi_1682	0.15	+0.9
1,971,680	+		Echvi_1682	0.19	-0.1