Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1641

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
1,896,490	-		Echvi_1640	0.30	-0.1
1,896,510	-		Echvi_1640	0.32	-2.0
1,896,567	-		Echvi_1640	0.38	+2.1
1,896,581	-		Echvi_1640	0.40	+1.3
1,896,606	-		Echvi_1640	0.43	+2.5
1,896,625	+		Echvi_1640	0.45	-1.3
1,896,697	-		Echvi_1640	0.53	-0.0
1,896,775	+		Echvi_1640	0.62	+0.9
1,896,775	+		Echvi_1640	0.62	-1.0
1,896,778	-		Echvi_1640	0.62	-0.1
1,896,778	-		Echvi_1640	0.62	+1.0
1,896,891	+		Echvi_1640	0.75	+0.0
1,896,891	+		Echvi_1640	0.75	+1.2
1,896,891	+		Echvi_1640	0.75	+0.7
1,896,891	+		Echvi_1640	0.75	+1.3
1,896,891	+		Echvi_1640	0.75	-0.0
1,896,892	-		Echvi_1640	0.75	-0.3
1,896,892	-		Echvi_1640	0.75	-2.1
1,896,892	-		Echvi_1640	0.75	+1.1
1,896,892	-		Echvi_1640	0.75	-2.3
1,896,892	-		Echvi_1640	0.75	+0.4
1,896,941	-		Echvi_1640	0.80	+0.8
1,896,941	-		Echvi_1640	0.80	+3.3
1,896,998	+		Echvi_1640	0.87	-1.4
1,896,998	+		Echvi_1640	0.87	+0.2
1,897,065	+				-0.5
1,897,065	+				-0.6
1,897,065	+				+0.9
1,897,066	-				+1.0
1,897,066	-				-0.5
1,897,066	-				-1.0
1,897,067	+				-1.1
1,897,129	+				-0.2
1,897,151	+				+1.5
1,897,162	+				-0.2
1,897,162	+				-3.2
1,897,163	-				+1.1
1,897,172	+				+0.3
1,897,173	-				-1.4
1,897,173	-				+0.7
1,897,177	+				+2.3
1,897,197	+				-1.5
1,897,197	+				+0.0
1,897,283	-				-2.7
1,897,283	-				+0.4
1,897,291	+				+0.0
1,897,296	+				+0.6
1,897,296	+				-0.4
1,897,300	-				-1.4
1,897,300	-				+0.2
1,897,352	-				+1.6
1,897,426	+				-1.1
1,897,426	+				-0.4
1,897,426	+				+1.8
1,897,427	-				+0.9
1,897,430	+				-0.3
1,897,431	-				-0.4
1,897,437	+				-2.4
1,897,438	-				-0.3
1,897,457	+				-0.9
1,897,458	-				-1.1
1,897,488	+				-0.6
1,897,488	+				+0.1
1,897,489	-				+0.2
1,897,489	-				-0.6
1,897,489	-				-1.3
1,897,489	-				-0.3
1,897,489	-				-0.7
1,897,533	+				-0.1
1,897,534	-				+1.4
1,897,536	-				+0.2
1,897,536	-				-0.2
1,897,536	-				+1.2
1,897,543	+				-0.4
1,897,543	+				-0.3
1,897,543	+				+1.2
1,897,543	+				+0.2
1,897,544	-				-0.2
1,897,544	-				-2.3
1,897,586	+		Echvi_1641	0.13	-1.0
1,897,587	-		Echvi_1641	0.13	+1.2
1,897,587	-		Echvi_1641	0.13	+1.5
1,897,734	+		Echvi_1641	0.30	+0.7
1,897,778	+		Echvi_1641	0.35	+0.4
1,897,779	-		Echvi_1641	0.35	+0.1
1,897,779	-		Echvi_1641	0.35	-1.2
1,897,856	+		Echvi_1641	0.44	-0.8
1,897,856	+		Echvi_1641	0.44	-2.0
1,897,856	+		Echvi_1641	0.44	-1.3
1,897,856	+		Echvi_1641	0.44	-0.2
1,897,857	-		Echvi_1641	0.44	-1.6
1,897,888	+		Echvi_1641	0.48	-0.9
1,897,888	+		Echvi_1641	0.48	-0.9
1,897,889	-		Echvi_1641	0.48	+0.0
1,897,889	-		Echvi_1641	0.48	-0.5
1,897,889	-		Echvi_1641	0.48	-0.8
1,897,889	-		Echvi_1641	0.48	-2.2
1,897,889	-		Echvi_1641	0.48	-0.8
1,897,915	+		Echvi_1641	0.51	-1.0
1,897,915	+		Echvi_1641	0.51	-0.1
1,897,915	+		Echvi_1641	0.51	-0.4
1,897,916	-		Echvi_1641	0.51	-1.4
1,897,919	+		Echvi_1641	0.51	+0.2
1,897,919	+		Echvi_1641	0.51	-0.6
1,897,919	+		Echvi_1641	0.51	-0.1
1,897,920	-		Echvi_1641	0.51	+1.9
1,897,920	-		Echvi_1641	0.51	+0.3
1,897,920	-		Echvi_1641	0.51	+1.6
1,897,924	+		Echvi_1641	0.52	+0.7
1,897,974	+		Echvi_1641	0.58	-0.4
1,897,974	+		Echvi_1641	0.58	+1.9
1,897,975	-		Echvi_1641	0.58	-1.2
1,898,038	-		Echvi_1641	0.65	-0.2
1,898,039	+		Echvi_1641	0.65	-0.7
1,898,039	+		Echvi_1641	0.65	-0.6
1,898,039	+		Echvi_1641	0.65	+0.9
1,898,039	+		Echvi_1641	0.65	-0.0
1,898,039	+		Echvi_1641	0.65	-1.8
1,898,132	+		Echvi_1641	0.76	+0.8
1,898,170	+		Echvi_1641	0.80	-1.5
1,898,170	+		Echvi_1641	0.80	+0.6
1,898,242	+		Echvi_1641	0.88	-1.3
1,898,260	+				-2.7
1,898,275	-				+0.9
1,898,334	+				+1.5
1,898,334	+				-0.9
1,898,334	+				+0.3
1,898,335	-				+0.2
1,898,346	-				-0.9
1,898,466	-				+1.8
1,898,471	-				+0.0
1,898,509	+				-0.7
1,898,509	+				-0.2
1,898,509	+				+0.4
1,898,509	+				+0.7
1,898,510	-				+0.2
1,898,510	-				+2.3
1,898,531	+		Echvi_1642	0.11	+0.2
1,898,542	+		Echvi_1642	0.12	+0.2
1,898,543	-		Echvi_1642	0.12	-2.1
1,898,555	+		Echvi_1642	0.13	+0.8
1,898,572	-		Echvi_1642	0.14	-2.0
1,898,599	+		Echvi_1642	0.16	+1.4
1,898,599	+		Echvi_1642	0.16	+0.3
1,898,599	+		Echvi_1642	0.16	+2.8
1,898,599	+		Echvi_1642	0.16	-0.5
1,898,599	+		Echvi_1642	0.16	-1.6
1,898,599	+		Echvi_1642	0.16	+0.4
1,898,600	-		Echvi_1642	0.16	+1.9
1,898,602	+		Echvi_1642	0.16	-0.5
1,898,602	+		Echvi_1642	0.16	+0.5
1,898,689	+		Echvi_1642	0.23	+0.9
1,898,689	+		Echvi_1642	0.23	+0.3
1,898,689	+		Echvi_1642	0.23	+0.8
1,898,690	-		Echvi_1642	0.23	-0.9
1,898,690	-		Echvi_1642	0.23	-1.6
1,898,832	-		Echvi_1642	0.34	+0.5
1,898,866	+		Echvi_1642	0.37	-0.2
1,898,881	+		Echvi_1642	0.38	-2.0
1,898,881	+		Echvi_1642	0.38	-1.1
1,898,882	-		Echvi_1642	0.38	+0.0
1,898,882	-		Echvi_1642	0.38	+0.4
1,898,917	+		Echvi_1642	0.41	-0.9
1,898,917	+		Echvi_1642	0.41	+0.5
1,898,918	-		Echvi_1642	0.41	-0.4
1,898,918	-		Echvi_1642	0.41	-0.4
1,898,960	-		Echvi_1642	0.44	-0.9
1,898,960	-		Echvi_1642	0.44	+0.6
1,898,963	+		Echvi_1642	0.44	+1.4
1,898,963	+		Echvi_1642	0.44	+1.7
1,898,964	-		Echvi_1642	0.44	+0.3
1,898,964	-		Echvi_1642	0.44	+0.3
1,898,964	-		Echvi_1642	0.44	-0.5
1,898,964	-		Echvi_1642	0.44	-0.1
1,898,964	-		Echvi_1642	0.44	+0.9
1,898,964	-		Echvi_1642	0.44	+1.2
1,899,031	+		Echvi_1642	0.49	-0.9
1,899,038	+		Echvi_1642	0.50	+0.6
1,899,039	-		Echvi_1642	0.50	+1.2
1,899,134	-		Echvi_1642	0.57	-1.1
1,899,152	+		Echvi_1642	0.59	-3.1
1,899,175	+		Echvi_1642	0.60	+0.6
1,899,299	-		Echvi_1642	0.70	-0.9