Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0889

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
1,017,133	-		Echvi_0887	0.88	-1.0
1,017,133	-		Echvi_0887	0.88	-0.9
1,017,133	-		Echvi_0887	0.88	+3.1
1,017,134	+		Echvi_0887	0.88	+0.5
1,017,134	+		Echvi_0887	0.88	-0.9
1,017,134	+		Echvi_0887	0.88	-0.1
1,017,134	+		Echvi_0887	0.88	-0.6
1,017,135	-		Echvi_0887	0.88	+0.5
1,017,135	-		Echvi_0887	0.88	+0.0
1,017,139	+		Echvi_0887	0.89	-0.5
1,017,159	-				+1.2
1,017,206	-				+1.0
1,017,206	-				-1.1
1,017,223	+				+0.8
1,017,223	+				+0.2
1,017,224	-				-0.4
1,017,224	-				+0.1
1,017,224	-				+0.2
1,017,224	-				+1.7
1,017,265	-				+0.6
1,017,283	+				-0.5
1,017,295	-				-0.3
1,017,299	+				-0.6
1,017,300	-				-0.2
1,017,300	-				-0.5
1,017,300	-				-0.0
1,017,327	+				+0.4
1,017,344	+				+0.1
1,017,345	-				+0.1
1,017,345	-				+1.7
1,017,345	-				+0.5
1,017,430	-		Echvi_0888	0.12	-0.0
1,017,439	+		Echvi_0888	0.13	+1.1
1,017,454	+		Echvi_0888	0.15	+0.3
1,017,455	-		Echvi_0888	0.16	+1.5
1,017,461	-		Echvi_0888	0.16	-0.4
1,017,462	+		Echvi_0888	0.17	+1.2
1,017,462	+		Echvi_0888	0.17	-0.1
1,017,462	+		Echvi_0888	0.17	-0.9
1,017,463	-		Echvi_0888	0.17	-0.5
1,017,463	-		Echvi_0888	0.17	+0.3
1,017,472	-		Echvi_0888	0.18	+0.8
1,017,473	+		Echvi_0888	0.18	+3.7
1,017,473	+		Echvi_0888	0.18	-0.3
1,017,474	-		Echvi_0888	0.18	+1.2
1,017,474	-		Echvi_0888	0.18	-0.4
1,017,474	-		Echvi_0888	0.18	-0.5
1,017,494	-		Echvi_0888	0.21	-0.2
1,017,494	-		Echvi_0888	0.21	-0.5
1,017,494	-		Echvi_0888	0.21	-0.9
1,017,514	+		Echvi_0888	0.24	-2.8
1,017,515	-		Echvi_0888	0.24	+0.5
1,017,515	-		Echvi_0888	0.24	+1.3
1,017,515	-		Echvi_0888	0.24	+0.8
1,017,626	+		Echvi_0888	0.40	+0.4
1,017,638	+		Echvi_0888	0.42	+1.9
1,017,639	-		Echvi_0888	0.42	-2.9
1,017,639	-		Echvi_0888	0.42	-0.6
1,017,639	-		Echvi_0888	0.42	+1.3
1,017,639	-		Echvi_0888	0.42	+0.0
1,017,639	-		Echvi_0888	0.42	-1.1
1,017,639	-		Echvi_0888	0.42	+0.4
1,017,646	+		Echvi_0888	0.43	-0.9
1,017,646	+		Echvi_0888	0.43	+0.6
1,017,646	+		Echvi_0888	0.43	+1.1
1,017,646	+		Echvi_0888	0.43	+0.2
1,017,647	-		Echvi_0888	0.44	-0.1
1,017,648	+		Echvi_0888	0.44	+0.5
1,017,648	+		Echvi_0888	0.44	+0.3
1,017,648	+		Echvi_0888	0.44	+1.1
1,017,649	-		Echvi_0888	0.44	+0.1
1,017,649	-		Echvi_0888	0.44	+0.3
1,017,708	+		Echvi_0888	0.52	+1.0
1,017,708	+		Echvi_0888	0.52	+0.5
1,017,708	+		Echvi_0888	0.52	-0.5
1,017,708	+		Echvi_0888	0.52	-0.2
1,017,708	+		Echvi_0888	0.52	+1.3
1,017,708	+		Echvi_0888	0.52	+0.7
1,017,709	-		Echvi_0888	0.53	-1.3
1,017,722	+		Echvi_0888	0.54	+0.8
1,017,723	-		Echvi_0888	0.55	+0.2
1,017,723	-		Echvi_0888	0.55	+0.6
1,017,772	+		Echvi_0888	0.62	+0.2
1,017,773	-		Echvi_0888	0.62	-0.6
1,017,773	-		Echvi_0888	0.62	+1.4
1,017,788	+		Echvi_0888	0.64	-0.1
1,017,796	-		Echvi_0888	0.65	-0.1
1,017,812	+		Echvi_0888	0.68	+0.4
1,017,813	-		Echvi_0888	0.68	-2.1
1,017,849	+		Echvi_0888	0.73	-0.7
1,017,849	+		Echvi_0888	0.73	-0.9
1,017,850	-		Echvi_0888	0.73	-1.7
1,017,860	+		Echvi_0888	0.75	-1.8
1,017,860	+		Echvi_0888	0.75	+0.4
1,017,861	-		Echvi_0888	0.75	+0.1
1,017,861	-		Echvi_0888	0.75	-0.5
1,017,861	-		Echvi_0888	0.75	-0.8
1,017,864	+		Echvi_0888	0.75	+0.5
1,017,864	+		Echvi_0888	0.75	+0.1
1,017,864	+		Echvi_0888	0.75	-0.0
1,017,864	+		Echvi_0888	0.75	+0.3
1,017,864	+		Echvi_0888	0.75	-0.9
1,017,865	-		Echvi_0888	0.75	+1.7
1,017,969	+				+1.0
1,017,969	+				-0.1
1,017,970	-				+0.3
1,018,002	-				-1.1
1,018,098	+				+1.1
1,018,106	+				-2.7
1,018,106	+				-0.6
1,018,107	-				-0.9
1,018,107	-				+0.4
1,018,150	+				-0.6
1,018,151	-				-2.5
1,018,151	-				-0.5
1,018,154	+				+0.5
1,018,154	+				+1.1
1,018,197	+				-1.1
1,018,198	-				+1.4
1,018,198	-				+1.2
1,018,198	-				-0.1
1,018,199	+				-1.1
1,018,199	+				+0.4
1,018,199	+				-1.1
1,018,199	+				+0.6
1,018,199	+				+2.3
1,018,200	-				-0.1
1,018,206	+				+0.3
1,018,206	+				-0.5
1,018,207	-				-0.1
1,018,301	+		Echvi_0889	0.21	+0.7
1,018,302	-		Echvi_0889	0.21	-0.3
1,018,470	+		Echvi_0889	0.40	-0.5
1,018,514	+		Echvi_0889	0.46	+0.3
1,018,514	+		Echvi_0889	0.46	+2.1
1,018,514	+		Echvi_0889	0.46	-1.3
1,018,551	+		Echvi_0889	0.50	+0.4
1,018,551	+		Echvi_0889	0.50	-1.1
1,018,551	+		Echvi_0889	0.50	+1.3
1,018,567	-		Echvi_0889	0.52	+0.5
1,018,714	+		Echvi_0889	0.69	+0.5
1,018,715	-		Echvi_0889	0.69	+1.5
1,018,772	-		Echvi_0889	0.75	+2.0
1,018,806	+		Echvi_0889	0.79	-0.1
1,018,806	+		Echvi_0889	0.79	-0.1
1,018,807	-		Echvi_0889	0.80	-0.2
1,018,818	-		Echvi_0889	0.81	+0.1
1,018,818	-		Echvi_0889	0.81	-0.4
1,018,818	-		Echvi_0889	0.81	+0.4
1,018,831	+		Echvi_0889	0.82	-0.5
1,018,831	+		Echvi_0889	0.82	+0.2
1,018,831	+		Echvi_0889	0.82	+1.2
1,018,831	+		Echvi_0889	0.82	+1.7
1,018,832	-		Echvi_0889	0.82	-1.2
1,018,833	+		Echvi_0889	0.83	-0.2
1,018,833	+		Echvi_0889	0.83	+0.6
1,018,834	-		Echvi_0889	0.83	+1.3
1,018,834	-		Echvi_0889	0.83	+0.1
1,018,834	-		Echvi_0889	0.83	-0.6
1,018,834	-		Echvi_0889	0.83	+1.1
1,018,834	-		Echvi_0889	0.83	+2.5
1,018,834	-		Echvi_0889	0.83	-1.2
1,018,840	-		Echvi_0889	0.83	+1.1
1,018,840	-		Echvi_0889	0.83	+0.2
1,018,843	+		Echvi_0889	0.84	+0.7
1,018,843	+		Echvi_0889	0.84	+0.4
1,018,981	-				-0.1
1,018,997	+				+1.0
1,019,000	+				+0.3
1,019,000	+				+0.5
1,019,000	+				+0.1
1,019,000	+				-0.2
1,019,001	-				+0.5
1,019,001	-				-0.8
1,019,001	-				+0.9
1,019,002	+				-0.8
1,019,003	-				+0.3
1,019,003	-				+0.2
1,019,003	-				-1.8
1,019,003	-				-0.9
1,019,004	+				+0.8
1,019,004	+				+0.3
1,019,004	+				-1.7
1,019,004	+				-0.5
1,019,004	+				-1.1
1,019,004	+				+0.3
1,019,004	+				+0.7
1,019,004	+				-0.5
1,019,004	+				+0.8
1,019,005	-				+1.1
1,019,005	-				+2.8
1,019,005	-				-1.2
1,019,005	-				+0.6
1,019,005	-				+0.0
1,019,007	+				+2.5
1,019,007	+				-1.6
1,019,007	+				+1.6
1,019,008	-				+0.3
1,019,026	+				-1.1
1,019,041	-				-0.3
1,019,090	+				+0.8
1,019,091	-				+1.6
1,019,091	-				+2.1
1,019,094	+				+0.4
1,019,095	-				-0.5
1,019,099	+				-1.1
1,019,209	+				+1.8
1,019,328	+				+2.3
1,019,329	-				+0.3
1,019,354	+				-0.5
1,019,355	-				-1.2
1,019,357	-				-0.1
1,019,419	+				-0.1
1,019,440	+				-0.2
1,019,440	+				-1.1
1,019,441	-				-0.7
1,019,451	-				-0.1
1,019,477	-				-0.5
1,019,486	-				+0.8
1,019,487	+				-0.4
1,019,491	-				+1.2
1,019,500	-				+0.8
1,019,525	+				-1.0
1,019,525	+				+0.1
1,019,603	+				+0.3
1,019,607	+				+0.3
1,019,608	-		Echvi_0890	0.10	-1.0
1,019,608	-		Echvi_0890	0.10	-0.0
1,019,623	+		Echvi_0890	0.11	-0.1
1,019,624	-		Echvi_0890	0.11	+2.4
1,019,624	-		Echvi_0890	0.11	-1.1
1,019,624	-		Echvi_0890	0.11	+0.2
1,019,624	-		Echvi_0890	0.11	-0.4
1,019,624	-		Echvi_0890	0.11	-1.2
1,019,630	-		Echvi_0890	0.12	-0.4
1,019,685	+		Echvi_0890	0.16	-0.3
1,019,686	-		Echvi_0890	0.16	+0.0
1,019,709	+		Echvi_0890	0.18	-1.2
1,019,709	+		Echvi_0890	0.18	-1.2
1,019,709	+		Echvi_0890	0.18	-1.2
1,019,709	+		Echvi_0890	0.18	+2.9
1,019,710	-		Echvi_0890	0.18	-0.3
1,019,710	-		Echvi_0890	0.18	-0.5
1,019,714	-		Echvi_0890	0.18	+0.9
1,019,723	+		Echvi_0890	0.19	+2.1
1,019,724	-		Echvi_0890	0.19	+0.9
1,019,724	-		Echvi_0890	0.19	+0.8
1,019,752	+		Echvi_0890	0.21	+1.4
1,019,774	+		Echvi_0890	0.23	-0.8
1,019,845	+		Echvi_0890	0.28	+1.1
1,019,845	+		Echvi_0890	0.28	-2.4
1,019,845	+		Echvi_0890	0.28	-0.1
1,019,845	+		Echvi_0890	0.28	-0.8
1,019,845	+		Echvi_0890	0.28	-0.1
1,019,845	+		Echvi_0890	0.28	+0.5
1,019,846	-		Echvi_0890	0.28	+1.4
1,019,846	-		Echvi_0890	0.28	-1.2
1,019,846	-		Echvi_0890	0.28	+1.0
1,019,852	+		Echvi_0890	0.29	-0.2
1,019,853	-		Echvi_0890	0.29	-0.3
1,019,908	-		Echvi_0890	0.33	-0.3
1,019,928	-		Echvi_0890	0.34	-0.6
1,019,943	+		Echvi_0890	0.36	+1.3
1,019,943	+		Echvi_0890	0.36	-0.4