Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20455 and CA264_20460 are separated by 280 nucleotides CA264_20460 and CA264_20465 are separated by 168 nucleotides CA264_20465 and CA264_20470 are separated by 11 nucleotides CA264_20470 and CA264_20475 are separated by 297 nucleotides
CA264_20455: CA264_20455 - LLM class flavin-dependent oxidoreductase, at 4,714,421 to 4,715,464
_20455
CA264_20460: CA264_20460 - hypothetical protein, at 4,715,745 to 4,716,116
_20460
CA264_20465: CA264_20465 - aspartate carbamoyltransferase, at 4,716,285 to 4,717,208
_20465
CA264_20470: CA264_20470 - bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase, at 4,717,220 to 4,717,768
_20470
CA264_20475: CA264_20475 - hypothetical protein, at 4,718,066 to 4,719,550
_20475
Position (kb) 4716
4717
4718 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4715.384 kb on + strand at 4715.384 kb on + strand at 4715.386 kb on + strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.387 kb on - strand at 4715.477 kb on - strand at 4715.490 kb on + strand at 4715.515 kb on + strand at 4715.526 kb on + strand at 4715.527 kb on - strand at 4715.527 kb on - strand at 4715.529 kb on - strand at 4715.595 kb on + strand at 4715.595 kb on + strand at 4715.606 kb on - strand at 4715.606 kb on - strand at 4715.618 kb on + strand at 4715.619 kb on - strand at 4715.621 kb on + strand at 4715.622 kb on - strand at 4715.625 kb on + strand at 4715.649 kb on + strand at 4715.650 kb on - strand at 4715.771 kb on + strand at 4715.853 kb on + strand, within CA264_20460 at 4715.892 kb on - strand, within CA264_20460 at 4715.912 kb on + strand, within CA264_20460 at 4715.913 kb on - strand, within CA264_20460 at 4716.029 kb on + strand, within CA264_20460 at 4716.029 kb on + strand, within CA264_20460 at 4716.030 kb on - strand, within CA264_20460 at 4716.105 kb on - strand at 4716.139 kb on - strand at 4716.257 kb on + strand at 4716.307 kb on + strand at 4716.312 kb on + strand at 4716.408 kb on - strand, within CA264_20465 at 4716.410 kb on + strand, within CA264_20465 at 4717.329 kb on + strand, within CA264_20470 at 4717.330 kb on - strand, within CA264_20470 at 4717.330 kb on - strand, within CA264_20470 at 4717.330 kb on - strand, within CA264_20470 at 4717.330 kb on - strand, within CA264_20470 at 4717.360 kb on - strand, within CA264_20470 at 4717.370 kb on + strand, within CA264_20470 at 4717.371 kb on - strand, within CA264_20470 at 4717.371 kb on - strand, within CA264_20470 at 4717.388 kb on + strand, within CA264_20470 at 4717.586 kb on + strand, within CA264_20470 at 4717.587 kb on - strand, within CA264_20470 at 4717.639 kb on - strand, within CA264_20470 at 4717.639 kb on - strand, within CA264_20470 at 4717.639 kb on - strand, within CA264_20470 at 4717.749 kb on - strand at 4717.782 kb on + strand at 4717.782 kb on + strand at 4717.783 kb on - strand at 4717.794 kb on + strand at 4717.794 kb on + strand at 4717.874 kb on + strand at 4717.875 kb on - strand at 4718.058 kb on + strand at 4718.058 kb on + strand at 4718.059 kb on - strand at 4718.088 kb on + strand at 4718.088 kb on + strand at 4718.089 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 4,715,384 + +0.5 4,715,384 + -0.0 4,715,386 + +0.7 4,715,387 - -0.3 4,715,387 - -0.4 4,715,387 - -0.3 4,715,387 - +0.4 4,715,387 - +0.5 4,715,477 - +2.1 4,715,490 + +0.2 4,715,515 + +0.2 4,715,526 + +0.8 4,715,527 - +0.1 4,715,527 - -0.1 4,715,529 - +0.4 4,715,595 + -0.1 4,715,595 + -0.0 4,715,606 - -1.5 4,715,606 - +1.2 4,715,618 + +0.3 4,715,619 - -0.2 4,715,621 + +1.3 4,715,622 - +3.3 4,715,625 + +0.5 4,715,649 + -0.6 4,715,650 - +0.3 4,715,771 + -0.6 4,715,853 + CA264_20460 0.29 -1.8 4,715,892 - CA264_20460 0.40 -0.0 4,715,912 + CA264_20460 0.45 -0.3 4,715,913 - CA264_20460 0.45 +0.1 4,716,029 + CA264_20460 0.76 -0.6 4,716,029 + CA264_20460 0.76 +2.5 4,716,030 - CA264_20460 0.77 -0.0 4,716,105 - -0.0 4,716,139 - +0.4 4,716,257 + -1.6 4,716,307 + -2.6 4,716,312 + +1.0 4,716,408 - CA264_20465 0.13 -0.8 4,716,410 + CA264_20465 0.14 -1.0 4,717,329 + CA264_20470 0.20 -1.0 4,717,330 - CA264_20470 0.20 +0.1 4,717,330 - CA264_20470 0.20 +1.0 4,717,330 - CA264_20470 0.20 -0.2 4,717,330 - CA264_20470 0.20 -0.6 4,717,360 - CA264_20470 0.26 +0.6 4,717,370 + CA264_20470 0.27 -0.1 4,717,371 - CA264_20470 0.28 -0.1 4,717,371 - CA264_20470 0.28 +0.5 4,717,388 + CA264_20470 0.31 -0.1 4,717,586 + CA264_20470 0.67 +0.1 4,717,587 - CA264_20470 0.67 +0.4 4,717,639 - CA264_20470 0.76 +0.4 4,717,639 - CA264_20470 0.76 +0.7 4,717,639 - CA264_20470 0.76 -0.2 4,717,749 - -0.3 4,717,782 + -0.5 4,717,782 + +0.4 4,717,783 - -0.0 4,717,794 + +0.6 4,717,794 + +1.0 4,717,874 + +1.4 4,717,875 - +0.1 4,718,058 + -0.0 4,718,058 + +1.0 4,718,059 - -0.5 4,718,088 + +0.0 4,718,088 + +0.5 4,718,089 - +0.2
Or see this region's nucleotide sequence