Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_19510
Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Nalidixic 0.016 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,507,881 | + | -0.3 | |||
4,507,891 | - | +0.8 | |||
4,507,893 | - | -0.5 | |||
4,507,911 | - | -0.2 | |||
4,507,911 | - | +0.2 | |||
4,507,913 | + | +0.8 | |||
4,507,913 | + | -0.1 | |||
4,507,914 | - | -0.2 | |||
4,507,914 | - | -1.3 | |||
4,507,914 | - | +0.2 | |||
4,507,936 | + | -1.0 | |||
4,507,941 | - | -1.7 | |||
4,507,941 | - | -0.6 | |||
4,507,941 | - | -0.9 | |||
4,507,987 | + | CA264_19510 | 0.11 | -0.2 | |
4,507,999 | - | CA264_19510 | 0.14 | -0.1 | |
4,508,008 | + | CA264_19510 | 0.17 | -0.7 | |
4,508,008 | + | CA264_19510 | 0.17 | +0.1 | |
4,508,063 | + | CA264_19510 | 0.32 | -0.1 | |
4,508,083 | - | CA264_19510 | 0.38 | -0.3 | |
4,508,088 | + | CA264_19510 | 0.40 | -0.6 | |
4,508,089 | - | CA264_19510 | 0.40 | -0.2 | |
4,508,112 | + | CA264_19510 | 0.46 | -0.8 | |
4,508,207 | + | CA264_19510 | 0.74 | +0.5 | |
4,508,208 | - | CA264_19510 | 0.74 | +0.1 | |
4,508,210 | + | CA264_19510 | 0.74 | -1.2 | |
4,508,252 | + | CA264_19510 | 0.86 | -0.6 | |
4,508,252 | + | CA264_19510 | 0.86 | -0.3 | |
4,508,252 | + | CA264_19510 | 0.86 | -0.1 | |
4,508,253 | - | CA264_19510 | 0.87 | +1.3 | |
4,508,253 | - | CA264_19510 | 0.87 | -0.4 |
Or see this region's nucleotide sequence