Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15215
Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Nalidixic 0.016 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,563,121 | - | CA264_15205 | 0.80 | +0.6 | |
3,563,186 | + | CA264_15205 | 0.86 | -0.6 | |
3,563,186 | + | CA264_15205 | 0.86 | -0.0 | |
3,563,187 | - | CA264_15205 | 0.86 | +2.0 | |
3,563,372 | + | -0.0 | |||
3,563,411 | - | -0.0 | |||
3,563,411 | - | +0.1 | |||
3,564,030 | + | -0.6 | |||
3,564,031 | - | +1.0 | |||
3,564,034 | - | -0.2 | |||
3,564,036 | + | -0.0 | |||
3,564,036 | + | -0.6 | |||
3,564,037 | - | -0.1 | |||
3,564,038 | + | -0.0 | |||
3,564,039 | - | -0.1 | |||
3,564,040 | + | -0.6 | |||
3,564,187 | + | CA264_15215 | 0.21 | -1.4 | |
3,564,258 | + | CA264_15215 | 0.32 | -1.6 | |
3,564,286 | - | CA264_15215 | 0.36 | -1.1 | |
3,564,326 | + | CA264_15215 | 0.42 | -1.3 | |
3,564,339 | - | CA264_15215 | 0.44 | -2.5 | |
3,564,396 | + | CA264_15215 | 0.52 | -1.6 | |
3,564,418 | - | CA264_15215 | 0.56 | -1.8 | |
3,564,570 | + | CA264_15215 | 0.79 | -1.7 | |
3,564,600 | + | CA264_15215 | 0.83 | -0.6 | |
3,564,614 | - | CA264_15215 | 0.85 | -1.4 | |
3,564,614 | - | CA264_15215 | 0.85 | -0.0 | |
3,564,614 | - | CA264_15215 | 0.85 | -0.9 | |
3,564,715 | + | -1.9 | |||
3,564,732 | - | -0.2 |
Or see this region's nucleotide sequence