Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14575 and CA264_14580 are separated by 349 nucleotides CA264_14580 and CA264_14585 are separated by 98 nucleotides CA264_14585 and CA264_14590 are separated by 131 nucleotides
CA264_14575: CA264_14575 - protease, at 3,426,997 to 3,427,800
_14575
CA264_14580: CA264_14580 - hypothetical protein, at 3,428,150 to 3,428,389
_14580
CA264_14585: CA264_14585 - YicC family protein, at 3,428,488 to 3,429,369
_14585
CA264_14590: CA264_14590 - phosphoribosylformylglycinamidine synthase I, at 3,429,501 to 3,430,193
_14590
Position (kb)
3428
3429
3430 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3427.506 kb on + strand, within CA264_14575 at 3427.516 kb on + strand, within CA264_14575 at 3427.552 kb on + strand, within CA264_14575 at 3427.605 kb on + strand, within CA264_14575 at 3427.605 kb on + strand, within CA264_14575 at 3427.605 kb on + strand, within CA264_14575 at 3427.606 kb on - strand, within CA264_14575 at 3427.638 kb on + strand, within CA264_14575 at 3427.659 kb on + strand, within CA264_14575 at 3427.826 kb on + strand at 3427.827 kb on - strand at 3427.827 kb on - strand at 3427.827 kb on - strand at 3427.841 kb on + strand at 3427.842 kb on - strand at 3427.843 kb on + strand at 3427.862 kb on + strand at 3427.862 kb on + strand at 3427.862 kb on + strand at 3427.863 kb on - strand at 3427.863 kb on - strand at 3427.868 kb on + strand at 3427.869 kb on - strand at 3427.869 kb on - strand at 3427.987 kb on - strand at 3428.051 kb on + strand at 3428.145 kb on - strand at 3428.187 kb on + strand, within CA264_14580 at 3428.187 kb on + strand, within CA264_14580 at 3428.188 kb on - strand, within CA264_14580 at 3428.282 kb on - strand, within CA264_14580 at 3428.393 kb on + strand at 3428.416 kb on + strand at 3428.417 kb on - strand at 3428.473 kb on - strand at 3428.480 kb on - strand at 3428.483 kb on + strand at 3428.484 kb on - strand at 3428.489 kb on + strand at 3428.490 kb on - strand at 3428.515 kb on + strand at 3428.620 kb on - strand, within CA264_14585 at 3428.654 kb on + strand, within CA264_14585 at 3428.673 kb on - strand, within CA264_14585 at 3428.728 kb on - strand, within CA264_14585 at 3428.729 kb on + strand, within CA264_14585 at 3428.730 kb on - strand, within CA264_14585 at 3428.730 kb on - strand, within CA264_14585 at 3428.730 kb on - strand, within CA264_14585 at 3428.732 kb on + strand, within CA264_14585 at 3428.732 kb on + strand, within CA264_14585 at 3428.733 kb on - strand, within CA264_14585 at 3428.733 kb on - strand, within CA264_14585 at 3429.102 kb on + strand, within CA264_14585 at 3429.103 kb on - strand, within CA264_14585 at 3429.103 kb on - strand, within CA264_14585 at 3429.104 kb on + strand, within CA264_14585 at 3429.105 kb on - strand, within CA264_14585 at 3429.105 kb on - strand, within CA264_14585 at 3429.105 kb on - strand, within CA264_14585 at 3429.108 kb on - strand, within CA264_14585 at 3429.108 kb on - strand, within CA264_14585 at 3429.108 kb on - strand, within CA264_14585 at 3429.130 kb on + strand, within CA264_14585 at 3429.230 kb on + strand, within CA264_14585 at 3429.231 kb on - strand, within CA264_14585 at 3429.258 kb on + strand, within CA264_14585 at 3429.369 kb on + strand at 3429.370 kb on - strand at 3429.370 kb on - strand at 3429.466 kb on - strand at 3429.469 kb on + strand at 3429.481 kb on - strand at 3429.486 kb on - strand at 3429.514 kb on + strand at 3429.563 kb on + strand at 3429.617 kb on - strand, within CA264_14590 at 3429.632 kb on + strand, within CA264_14590 at 3429.634 kb on + strand, within CA264_14590 at 3429.635 kb on - strand, within CA264_14590 at 3429.666 kb on + strand, within CA264_14590 at 3429.667 kb on - strand, within CA264_14590 at 3429.701 kb on + strand, within CA264_14590 at 3429.701 kb on + strand, within CA264_14590 at 3429.702 kb on - strand, within CA264_14590 at 3429.704 kb on + strand, within CA264_14590 at 3429.704 kb on + strand, within CA264_14590 at 3429.704 kb on + strand, within CA264_14590 at 3429.846 kb on + strand, within CA264_14590 at 3429.846 kb on + strand, within CA264_14590 at 3429.846 kb on + strand, within CA264_14590 at 3429.847 kb on - strand, within CA264_14590 at 3429.847 kb on - strand, within CA264_14590 at 3429.906 kb on + strand, within CA264_14590 at 3429.906 kb on + strand, within CA264_14590 at 3430.000 kb on - strand, within CA264_14590 at 3430.170 kb on - strand at 3430.181 kb on - strand at 3430.201 kb on + strand at 3430.220 kb on + strand at 3430.248 kb on - strand at 3430.289 kb on + strand at 3430.290 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 3,427,506 + CA264_14575 0.63 -0.1 3,427,516 + CA264_14575 0.65 -0.8 3,427,552 + CA264_14575 0.69 +1.2 3,427,605 + CA264_14575 0.76 +0.1 3,427,605 + CA264_14575 0.76 +0.0 3,427,605 + CA264_14575 0.76 +0.7 3,427,606 - CA264_14575 0.76 -0.4 3,427,638 + CA264_14575 0.80 +0.5 3,427,659 + CA264_14575 0.82 +0.6 3,427,826 + -0.1 3,427,827 - -0.3 3,427,827 - -0.1 3,427,827 - +0.0 3,427,841 + +0.9 3,427,842 - -1.0 3,427,843 + +0.2 3,427,862 + +0.9 3,427,862 + -0.7 3,427,862 + +0.6 3,427,863 - +1.5 3,427,863 - +0.1 3,427,868 + +0.2 3,427,869 - -0.0 3,427,869 - -0.9 3,427,987 - -0.0 3,428,051 + -0.3 3,428,145 - +0.2 3,428,187 + CA264_14580 0.15 +1.5 3,428,187 + CA264_14580 0.15 -0.9 3,428,188 - CA264_14580 0.16 -0.7 3,428,282 - CA264_14580 0.55 -0.2 3,428,393 + +0.5 3,428,416 + +0.6 3,428,417 - +0.3 3,428,473 - +0.3 3,428,480 - +0.3 3,428,483 + +0.0 3,428,484 - +0.7 3,428,489 + +0.3 3,428,490 - +0.3 3,428,515 + +0.7 3,428,620 - CA264_14585 0.15 +0.8 3,428,654 + CA264_14585 0.19 -0.8 3,428,673 - CA264_14585 0.21 +1.9 3,428,728 - CA264_14585 0.27 +0.7 3,428,729 + CA264_14585 0.27 +0.9 3,428,730 - CA264_14585 0.27 -0.2 3,428,730 - CA264_14585 0.27 +0.5 3,428,730 - CA264_14585 0.27 +1.1 3,428,732 + CA264_14585 0.28 -0.2 3,428,732 + CA264_14585 0.28 +0.4 3,428,733 - CA264_14585 0.28 -0.3 3,428,733 - CA264_14585 0.28 +0.9 3,429,102 + CA264_14585 0.70 +0.6 3,429,103 - CA264_14585 0.70 -0.6 3,429,103 - CA264_14585 0.70 +0.4 3,429,104 + CA264_14585 0.70 +0.2 3,429,105 - CA264_14585 0.70 +0.1 3,429,105 - CA264_14585 0.70 -1.4 3,429,105 - CA264_14585 0.70 -0.1 3,429,108 - CA264_14585 0.70 -0.4 3,429,108 - CA264_14585 0.70 -0.7 3,429,108 - CA264_14585 0.70 +0.6 3,429,130 + CA264_14585 0.73 +0.4 3,429,230 + CA264_14585 0.84 -0.1 3,429,231 - CA264_14585 0.84 +1.5 3,429,258 + CA264_14585 0.87 +0.6 3,429,369 + -0.1 3,429,370 - -1.2 3,429,370 - -0.1 3,429,466 - -0.5 3,429,469 + +0.7 3,429,481 - +1.1 3,429,486 - +0.4 3,429,514 + -0.1 3,429,563 + -0.9 3,429,617 - CA264_14590 0.17 -0.9 3,429,632 + CA264_14590 0.19 +0.3 3,429,634 + CA264_14590 0.19 -0.9 3,429,635 - CA264_14590 0.19 -0.1 3,429,666 + CA264_14590 0.24 +0.2 3,429,667 - CA264_14590 0.24 -0.7 3,429,701 + CA264_14590 0.29 +1.9 3,429,701 + CA264_14590 0.29 +0.2 3,429,702 - CA264_14590 0.29 -1.1 3,429,704 + CA264_14590 0.29 -0.7 3,429,704 + CA264_14590 0.29 -0.4 3,429,704 + CA264_14590 0.29 -3.1 3,429,846 + CA264_14590 0.50 +0.9 3,429,846 + CA264_14590 0.50 -0.1 3,429,846 + CA264_14590 0.50 -1.1 3,429,847 - CA264_14590 0.50 -1.1 3,429,847 - CA264_14590 0.50 -0.9 3,429,906 + CA264_14590 0.58 +0.0 3,429,906 + CA264_14590 0.58 -1.0 3,430,000 - CA264_14590 0.72 -0.5 3,430,170 - -0.1 3,430,181 - -2.0 3,430,201 + -0.1 3,430,220 + +0.1 3,430,248 - -0.2 3,430,289 + -0.1 3,430,290 - +0.3
Or see this region's nucleotide sequence