Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14105 and CA264_14110 are separated by 1 nucleotides CA264_14110 and CA264_14115 are separated by 161 nucleotides CA264_14115 and CA264_14120 are separated by 132 nucleotides CA264_14120 and CA264_14125 are separated by 133 nucleotides
CA264_14105: CA264_14105 - T9SS C-terminal target domain-containing protein, at 3,313,128 to 3,314,486
_14105
CA264_14110: CA264_14110 - phosphoribosyltransferase, at 3,314,488 to 3,315,114
_14110
CA264_14115: CA264_14115 - hydrolase, at 3,315,276 to 3,315,962
_14115
CA264_14120: CA264_14120 - hypothetical protein, at 3,316,095 to 3,316,766
_14120
CA264_14125: CA264_14125 - endonuclease V, at 3,316,900 to 3,317,583
_14125
Position (kb)
3315
3316 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3314.471 kb on + strand at 3314.512 kb on + strand at 3314.529 kb on - strand at 3314.701 kb on + strand, within CA264_14110 at 3314.829 kb on + strand, within CA264_14110 at 3314.853 kb on - strand, within CA264_14110 at 3314.958 kb on + strand, within CA264_14110 at 3314.959 kb on - strand, within CA264_14110 at 3315.133 kb on + strand at 3315.202 kb on - strand at 3315.419 kb on + strand, within CA264_14115 at 3315.420 kb on - strand, within CA264_14115 at 3315.520 kb on - strand, within CA264_14115 at 3315.520 kb on - strand, within CA264_14115 at 3315.601 kb on - strand, within CA264_14115 at 3315.601 kb on - strand, within CA264_14115 at 3315.679 kb on + strand, within CA264_14115 at 3315.679 kb on + strand, within CA264_14115 at 3315.680 kb on - strand, within CA264_14115 at 3315.683 kb on + strand, within CA264_14115 at 3315.684 kb on - strand, within CA264_14115 at 3315.715 kb on - strand, within CA264_14115 at 3315.828 kb on - strand, within CA264_14115 at 3315.950 kb on + strand at 3315.952 kb on + strand at 3315.953 kb on - strand at 3315.953 kb on - strand at 3315.953 kb on - strand at 3315.962 kb on + strand at 3315.963 kb on - strand at 3316.005 kb on + strand at 3316.006 kb on - strand at 3316.013 kb on - strand at 3316.024 kb on + strand at 3316.043 kb on - strand at 3316.069 kb on - strand at 3316.090 kb on + strand at 3316.090 kb on + strand at 3316.090 kb on + strand at 3316.091 kb on - strand at 3316.091 kb on - strand at 3316.094 kb on + strand at 3316.094 kb on + strand at 3316.095 kb on - strand at 3316.095 kb on - strand at 3316.095 kb on - strand at 3316.105 kb on + strand at 3316.105 kb on + strand at 3316.106 kb on - strand at 3316.132 kb on + strand at 3316.132 kb on + strand at 3316.133 kb on - strand at 3316.173 kb on - strand, within CA264_14120 at 3316.328 kb on + strand, within CA264_14120 at 3316.329 kb on - strand, within CA264_14120 at 3316.383 kb on + strand, within CA264_14120 at 3316.398 kb on - strand, within CA264_14120 at 3316.412 kb on - strand, within CA264_14120 at 3316.439 kb on + strand, within CA264_14120 at 3316.459 kb on + strand, within CA264_14120 at 3316.658 kb on - strand, within CA264_14120 at 3316.780 kb on + strand at 3316.780 kb on + strand at 3316.819 kb on + strand at 3316.820 kb on - strand at 3316.832 kb on + strand at 3316.842 kb on + strand at 3316.843 kb on - strand at 3316.843 kb on - strand at 3316.893 kb on + strand at 3316.907 kb on - strand at 3316.909 kb on + strand at 3316.910 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 3,314,471 + +0.1 3,314,512 + +0.9 3,314,529 - -0.1 3,314,701 + CA264_14110 0.34 -0.9 3,314,829 + CA264_14110 0.54 -0.9 3,314,853 - CA264_14110 0.58 -0.7 3,314,958 + CA264_14110 0.75 +1.2 3,314,959 - CA264_14110 0.75 -0.4 3,315,133 + +0.9 3,315,202 - +0.4 3,315,419 + CA264_14115 0.21 +0.3 3,315,420 - CA264_14115 0.21 -0.3 3,315,520 - CA264_14115 0.36 -0.4 3,315,520 - CA264_14115 0.36 +0.3 3,315,601 - CA264_14115 0.47 -0.7 3,315,601 - CA264_14115 0.47 +1.9 3,315,679 + CA264_14115 0.59 -1.0 3,315,679 + CA264_14115 0.59 +1.9 3,315,680 - CA264_14115 0.59 +0.3 3,315,683 + CA264_14115 0.59 -0.4 3,315,684 - CA264_14115 0.59 +1.2 3,315,715 - CA264_14115 0.64 +0.3 3,315,828 - CA264_14115 0.80 +0.5 3,315,950 + +0.0 3,315,952 + -0.1 3,315,953 - -0.7 3,315,953 - -0.4 3,315,953 - +0.2 3,315,962 + +0.2 3,315,963 - +0.1 3,316,005 + -1.8 3,316,006 - +0.2 3,316,013 - +1.6 3,316,024 + +0.3 3,316,043 - +0.5 3,316,069 - -0.5 3,316,090 + +0.5 3,316,090 + -0.1 3,316,090 + -0.5 3,316,091 - -0.1 3,316,091 - -0.6 3,316,094 + +1.9 3,316,094 + -1.4 3,316,095 - -0.5 3,316,095 - +0.9 3,316,095 - +0.7 3,316,105 + -2.3 3,316,105 + -0.2 3,316,106 - -0.1 3,316,132 + +0.5 3,316,132 + -1.1 3,316,133 - -1.4 3,316,173 - CA264_14120 0.12 -0.1 3,316,328 + CA264_14120 0.35 -0.0 3,316,329 - CA264_14120 0.35 +0.1 3,316,383 + CA264_14120 0.43 -0.1 3,316,398 - CA264_14120 0.45 +0.1 3,316,412 - CA264_14120 0.47 +0.0 3,316,439 + CA264_14120 0.51 -0.1 3,316,459 + CA264_14120 0.54 -0.9 3,316,658 - CA264_14120 0.84 +1.5 3,316,780 + +0.1 3,316,780 + -0.2 3,316,819 + +0.4 3,316,820 - -0.2 3,316,832 + +0.6 3,316,842 + -0.1 3,316,843 - -0.9 3,316,843 - +0.7 3,316,893 + -0.2 3,316,907 - +0.2 3,316,909 + +0.4 3,316,910 - +0.4
Or see this region's nucleotide sequence