Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14090 and CA264_14095 are separated by 227 nucleotides CA264_14095 and CA264_14100 are separated by 235 nucleotides
CA264_14090: CA264_14090 - NmrA family protein, at 3,308,714 to 3,309,625
_14090
CA264_14095: CA264_14095 - transposase, at 3,309,853 to 3,310,400
_14095
CA264_14100: CA264_14100 - isocitrate dehydrogenase (NADP(+)), at 3,310,636 to 3,312,864
_14100
Position (kb)
3309
3310
3311 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3308.860 kb on + strand, within CA264_14090 at 3308.890 kb on + strand, within CA264_14090 at 3308.902 kb on + strand, within CA264_14090 at 3308.907 kb on - strand, within CA264_14090 at 3308.929 kb on + strand, within CA264_14090 at 3308.945 kb on + strand, within CA264_14090 at 3309.043 kb on + strand, within CA264_14090 at 3309.046 kb on - strand, within CA264_14090 at 3309.056 kb on - strand, within CA264_14090 at 3309.064 kb on + strand, within CA264_14090 at 3309.065 kb on - strand, within CA264_14090 at 3309.068 kb on - strand, within CA264_14090 at 3309.070 kb on + strand, within CA264_14090 at 3309.070 kb on + strand, within CA264_14090 at 3309.099 kb on + strand, within CA264_14090 at 3309.102 kb on + strand, within CA264_14090 at 3309.102 kb on + strand, within CA264_14090 at 3309.103 kb on - strand, within CA264_14090 at 3309.185 kb on - strand, within CA264_14090 at 3309.193 kb on + strand, within CA264_14090 at 3309.203 kb on - strand, within CA264_14090 at 3309.269 kb on - strand, within CA264_14090 at 3309.296 kb on - strand, within CA264_14090 at 3309.356 kb on + strand, within CA264_14090 at 3309.356 kb on + strand, within CA264_14090 at 3309.357 kb on - strand, within CA264_14090 at 3309.357 kb on - strand, within CA264_14090 at 3309.360 kb on + strand, within CA264_14090 at 3309.360 kb on + strand, within CA264_14090 at 3309.361 kb on - strand, within CA264_14090 at 3309.361 kb on - strand, within CA264_14090 at 3309.395 kb on - strand, within CA264_14090 at 3309.470 kb on + strand, within CA264_14090 at 3309.479 kb on + strand, within CA264_14090 at 3309.499 kb on + strand, within CA264_14090 at 3309.499 kb on + strand, within CA264_14090 at 3309.499 kb on + strand, within CA264_14090 at 3309.587 kb on + strand at 3309.588 kb on - strand at 3309.590 kb on + strand at 3309.591 kb on - strand at 3309.591 kb on - strand at 3309.591 kb on - strand at 3309.611 kb on - strand at 3309.625 kb on + strand at 3309.679 kb on + strand at 3309.680 kb on - strand at 3309.718 kb on + strand at 3309.722 kb on + strand at 3309.722 kb on + strand at 3309.722 kb on + strand at 3309.722 kb on + strand at 3309.722 kb on + strand at 3309.722 kb on + strand at 3309.723 kb on - strand at 3309.723 kb on - strand at 3309.723 kb on - strand at 3309.723 kb on - strand at 3309.795 kb on + strand at 3309.796 kb on - strand at 3309.796 kb on - strand at 3309.796 kb on - strand at 3309.836 kb on + strand at 3309.836 kb on + strand at 3309.837 kb on - strand at 3309.837 kb on - strand at 3309.844 kb on + strand at 3309.845 kb on - strand at 3309.849 kb on + strand at 3309.849 kb on + strand at 3309.924 kb on - strand, within CA264_14095 at 3309.946 kb on + strand, within CA264_14095 at 3309.947 kb on - strand, within CA264_14095 at 3309.959 kb on + strand, within CA264_14095 at 3309.959 kb on + strand, within CA264_14095 at 3309.959 kb on + strand, within CA264_14095 at 3309.960 kb on - strand, within CA264_14095 at 3309.960 kb on - strand, within CA264_14095 at 3309.960 kb on - strand, within CA264_14095 at 3309.976 kb on + strand, within CA264_14095 at 3309.977 kb on - strand, within CA264_14095 at 3310.006 kb on + strand, within CA264_14095 at 3310.007 kb on - strand, within CA264_14095 at 3310.021 kb on - strand, within CA264_14095 at 3310.021 kb on - strand, within CA264_14095 at 3310.021 kb on - strand, within CA264_14095 at 3310.042 kb on - strand, within CA264_14095 at 3310.074 kb on - strand, within CA264_14095 at 3310.076 kb on + strand, within CA264_14095 at 3310.104 kb on - strand, within CA264_14095 at 3310.109 kb on + strand, within CA264_14095 at 3310.110 kb on - strand, within CA264_14095 at 3310.112 kb on - strand, within CA264_14095 at 3310.239 kb on - strand, within CA264_14095 at 3310.261 kb on + strand, within CA264_14095 at 3310.261 kb on + strand, within CA264_14095 at 3310.261 kb on + strand, within CA264_14095 at 3310.281 kb on + strand, within CA264_14095 at 3310.281 kb on + strand, within CA264_14095 at 3310.282 kb on - strand, within CA264_14095 at 3310.340 kb on + strand, within CA264_14095 at 3310.341 kb on - strand, within CA264_14095 at 3310.341 kb on - strand, within CA264_14095 at 3310.351 kb on + strand at 3310.351 kb on + strand at 3310.351 kb on + strand at 3310.351 kb on + strand at 3310.356 kb on + strand at 3310.388 kb on - strand at 3310.393 kb on + strand at 3310.393 kb on + strand at 3310.394 kb on - strand at 3310.394 kb on - strand at 3310.394 kb on - strand at 3310.428 kb on - strand at 3310.437 kb on + strand at 3310.438 kb on - strand at 3310.439 kb on + strand at 3310.440 kb on - strand at 3310.440 kb on - strand at 3310.442 kb on + strand at 3310.443 kb on - strand at 3310.443 kb on - strand at 3310.444 kb on + strand at 3310.457 kb on + strand at 3310.478 kb on + strand at 3310.479 kb on - strand at 3310.508 kb on + strand at 3310.509 kb on - strand at 3310.509 kb on - strand at 3310.509 kb on - strand at 3310.509 kb on - strand at 3310.509 kb on - strand at 3310.509 kb on - strand at 3310.523 kb on + strand at 3310.547 kb on - strand at 3310.621 kb on - strand at 3310.626 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 3,308,860 + CA264_14090 0.16 +0.9 3,308,890 + CA264_14090 0.19 +0.6 3,308,902 + CA264_14090 0.21 -0.8 3,308,907 - CA264_14090 0.21 -0.1 3,308,929 + CA264_14090 0.24 +0.3 3,308,945 + CA264_14090 0.25 -0.0 3,309,043 + CA264_14090 0.36 +0.5 3,309,046 - CA264_14090 0.36 -0.2 3,309,056 - CA264_14090 0.38 -1.0 3,309,064 + CA264_14090 0.38 -0.2 3,309,065 - CA264_14090 0.38 -0.6 3,309,068 - CA264_14090 0.39 +1.1 3,309,070 + CA264_14090 0.39 +0.1 3,309,070 + CA264_14090 0.39 +1.3 3,309,099 + CA264_14090 0.42 -1.0 3,309,102 + CA264_14090 0.43 +0.5 3,309,102 + CA264_14090 0.43 -0.6 3,309,103 - CA264_14090 0.43 -0.8 3,309,185 - CA264_14090 0.52 -0.1 3,309,193 + CA264_14090 0.53 -0.4 3,309,203 - CA264_14090 0.54 +0.4 3,309,269 - CA264_14090 0.61 -0.1 3,309,296 - CA264_14090 0.64 -1.4 3,309,356 + CA264_14090 0.70 -0.3 3,309,356 + CA264_14090 0.70 -0.4 3,309,357 - CA264_14090 0.71 +0.4 3,309,357 - CA264_14090 0.71 +0.7 3,309,360 + CA264_14090 0.71 -0.0 3,309,360 + CA264_14090 0.71 -0.1 3,309,361 - CA264_14090 0.71 -0.8 3,309,361 - CA264_14090 0.71 +0.4 3,309,395 - CA264_14090 0.75 -0.1 3,309,470 + CA264_14090 0.83 +0.5 3,309,479 + CA264_14090 0.84 -0.1 3,309,499 + CA264_14090 0.86 +1.1 3,309,499 + CA264_14090 0.86 +0.1 3,309,499 + CA264_14090 0.86 +0.3 3,309,587 + +0.3 3,309,588 - +0.9 3,309,590 + -1.4 3,309,591 - +0.9 3,309,591 - -0.1 3,309,591 - +0.8 3,309,611 - +0.4 3,309,625 + -3.2 3,309,679 + +0.2 3,309,680 - -0.5 3,309,718 + +0.2 3,309,722 + -1.0 3,309,722 + -0.1 3,309,722 + -1.8 3,309,722 + -0.7 3,309,722 + +0.4 3,309,722 + -0.8 3,309,723 - +0.3 3,309,723 - +1.3 3,309,723 - -0.4 3,309,723 - -0.0 3,309,795 + -0.1 3,309,796 - -1.7 3,309,796 - -3.6 3,309,796 - -0.4 3,309,836 + +0.8 3,309,836 + -0.4 3,309,837 - -1.1 3,309,837 - +0.5 3,309,844 + -0.4 3,309,845 - -0.1 3,309,849 + -0.3 3,309,849 + +0.0 3,309,924 - CA264_14095 0.13 -0.1 3,309,946 + CA264_14095 0.17 -0.4 3,309,947 - CA264_14095 0.17 +0.2 3,309,959 + CA264_14095 0.19 +0.5 3,309,959 + CA264_14095 0.19 -1.4 3,309,959 + CA264_14095 0.19 -1.0 3,309,960 - CA264_14095 0.20 -0.4 3,309,960 - CA264_14095 0.20 -0.1 3,309,960 - CA264_14095 0.20 -1.7 3,309,976 + CA264_14095 0.22 -0.1 3,309,977 - CA264_14095 0.23 +0.7 3,310,006 + CA264_14095 0.28 -0.7 3,310,007 - CA264_14095 0.28 -0.2 3,310,021 - CA264_14095 0.31 +1.4 3,310,021 - CA264_14095 0.31 -0.4 3,310,021 - CA264_14095 0.31 -0.3 3,310,042 - CA264_14095 0.34 -0.6 3,310,074 - CA264_14095 0.40 -0.4 3,310,076 + CA264_14095 0.41 +0.8 3,310,104 - CA264_14095 0.46 -0.1 3,310,109 + CA264_14095 0.47 -0.8 3,310,110 - CA264_14095 0.47 +0.5 3,310,112 - CA264_14095 0.47 +0.2 3,310,239 - CA264_14095 0.70 -0.7 3,310,261 + CA264_14095 0.74 +2.7 3,310,261 + CA264_14095 0.74 +1.6 3,310,261 + CA264_14095 0.74 -1.1 3,310,281 + CA264_14095 0.78 -0.4 3,310,281 + CA264_14095 0.78 +0.9 3,310,282 - CA264_14095 0.78 -0.8 3,310,340 + CA264_14095 0.89 +0.5 3,310,341 - CA264_14095 0.89 -0.4 3,310,341 - CA264_14095 0.89 +0.2 3,310,351 + -0.4 3,310,351 + +1.3 3,310,351 + +0.2 3,310,351 + -0.9 3,310,356 + +0.5 3,310,388 - -0.9 3,310,393 + -0.9 3,310,393 + -0.1 3,310,394 - +0.2 3,310,394 - +0.7 3,310,394 - +1.7 3,310,428 - +1.1 3,310,437 + +0.5 3,310,438 - +0.2 3,310,439 + -1.7 3,310,440 - +0.3 3,310,440 - -0.1 3,310,442 + +0.9 3,310,443 - -1.1 3,310,443 - -0.3 3,310,444 + +0.2 3,310,457 + +0.4 3,310,478 + -0.5 3,310,479 - -0.6 3,310,508 + -0.1 3,310,509 - +0.3 3,310,509 - +0.9 3,310,509 - -0.4 3,310,509 - -1.4 3,310,509 - +1.6 3,310,509 - -1.8 3,310,523 + -0.7 3,310,547 - -0.7 3,310,621 - -1.3 3,310,626 - -0.8
Or see this region's nucleotide sequence