Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04090 and CA264_04095 are separated by 306 nucleotides CA264_04095 and CA264_04100 are separated by 140 nucleotides CA264_04100 and CA264_04105 are separated by 313 nucleotides
CA264_04090: CA264_04090 - IS3 family transposase, at 948,551 to 949,647
_04090
CA264_04095: CA264_04095 - GAF domain-containing protein, at 949,954 to 950,445
_04095
CA264_04100: CA264_04100 - twin-arginine translocase TatA/TatE family subunit, at 950,586 to 950,798
_04100
CA264_04105: CA264_04105 - hypothetical protein, at 951,112 to 951,660
_04105
Position (kb) 950
951 Strain fitness (log2 ratio) -1
0
1 at 949.736 kb on + strand at 949.892 kb on + strand at 949.905 kb on + strand at 949.905 kb on + strand at 949.906 kb on - strand at 949.910 kb on + strand at 949.911 kb on - strand at 949.911 kb on - strand at 949.914 kb on + strand at 949.915 kb on - strand at 949.933 kb on - strand at 949.962 kb on + strand at 950.038 kb on - strand, within CA264_04095 at 950.039 kb on + strand, within CA264_04095 at 950.040 kb on - strand, within CA264_04095 at 950.040 kb on - strand, within CA264_04095 at 950.040 kb on - strand, within CA264_04095 at 950.100 kb on - strand, within CA264_04095 at 950.183 kb on + strand, within CA264_04095 at 950.183 kb on + strand, within CA264_04095 at 950.351 kb on - strand, within CA264_04095 at 950.390 kb on + strand, within CA264_04095 at 950.391 kb on - strand, within CA264_04095 at 950.537 kb on + strand at 950.565 kb on + strand at 950.588 kb on - strand at 950.638 kb on - strand, within CA264_04100 at 950.680 kb on - strand, within CA264_04100 at 950.733 kb on + strand, within CA264_04100 at 950.733 kb on + strand, within CA264_04100 at 950.738 kb on + strand, within CA264_04100 at 950.781 kb on + strand at 950.782 kb on - strand at 950.809 kb on - strand at 950.842 kb on + strand at 950.846 kb on - strand at 950.846 kb on - strand at 950.847 kb on + strand at 950.881 kb on + strand at 950.997 kb on + strand at 950.998 kb on - strand at 951.057 kb on + strand at 951.061 kb on + strand at 951.062 kb on - strand at 951.062 kb on - strand at 951.113 kb on + strand at 951.189 kb on - strand, within CA264_04105 at 951.226 kb on - strand, within CA264_04105 at 951.226 kb on - strand, within CA264_04105 at 951.226 kb on - strand, within CA264_04105 at 951.226 kb on - strand, within CA264_04105 at 951.311 kb on - strand, within CA264_04105 at 951.311 kb on - strand, within CA264_04105 at 951.405 kb on - strand, within CA264_04105 at 951.447 kb on + strand, within CA264_04105 at 951.479 kb on + strand, within CA264_04105 at 951.533 kb on - strand, within CA264_04105 at 951.540 kb on + strand, within CA264_04105 at 951.540 kb on + strand, within CA264_04105 at 951.541 kb on - strand, within CA264_04105 at 951.541 kb on - strand, within CA264_04105 at 951.570 kb on - strand, within CA264_04105 at 951.619 kb on - strand at 951.619 kb on - strand at 951.630 kb on - strand at 951.660 kb on + strand at 951.660 kb on + strand at 951.675 kb on + strand at 951.746 kb on - strand at 951.769 kb on + strand at 951.774 kb on - strand at 951.775 kb on + strand at 951.789 kb on + strand at 951.790 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 949,736 + +0.3 949,892 + +0.8 949,905 + -0.3 949,905 + -1.5 949,906 - -0.2 949,910 + +1.4 949,911 - +0.4 949,911 - -0.2 949,914 + -1.0 949,915 - -0.3 949,933 - -0.2 949,962 + +0.4 950,038 - CA264_04095 0.17 -0.9 950,039 + CA264_04095 0.17 +0.5 950,040 - CA264_04095 0.17 -0.8 950,040 - CA264_04095 0.17 -0.5 950,040 - CA264_04095 0.17 +0.4 950,100 - CA264_04095 0.30 -1.3 950,183 + CA264_04095 0.47 +0.8 950,183 + CA264_04095 0.47 -0.1 950,351 - CA264_04095 0.81 -0.6 950,390 + CA264_04095 0.89 -0.8 950,391 - CA264_04095 0.89 -0.2 950,537 + +0.8 950,565 + +0.9 950,588 - +0.0 950,638 - CA264_04100 0.24 -0.9 950,680 - CA264_04100 0.44 -0.4 950,733 + CA264_04100 0.69 -1.3 950,733 + CA264_04100 0.69 -1.1 950,738 + CA264_04100 0.71 +0.1 950,781 + -1.5 950,782 - -0.2 950,809 - +0.4 950,842 + -1.5 950,846 - +0.1 950,846 - +0.1 950,847 + -0.0 950,881 + +0.1 950,997 + -0.4 950,998 - +0.1 951,057 + -1.2 951,061 + +0.2 951,062 - -0.1 951,062 - +0.3 951,113 + -0.6 951,189 - CA264_04105 0.14 +0.4 951,226 - CA264_04105 0.21 -0.3 951,226 - CA264_04105 0.21 -0.2 951,226 - CA264_04105 0.21 +0.1 951,226 - CA264_04105 0.21 +0.5 951,311 - CA264_04105 0.36 +0.8 951,311 - CA264_04105 0.36 -0.5 951,405 - CA264_04105 0.53 +0.1 951,447 + CA264_04105 0.61 +0.0 951,479 + CA264_04105 0.67 +0.8 951,533 - CA264_04105 0.77 +0.3 951,540 + CA264_04105 0.78 +0.3 951,540 + CA264_04105 0.78 -0.1 951,541 - CA264_04105 0.78 -0.2 951,541 - CA264_04105 0.78 +0.1 951,570 - CA264_04105 0.83 +0.8 951,619 - -1.0 951,619 - +0.2 951,630 - +1.1 951,660 + -0.3 951,660 + +1.1 951,675 + -1.7 951,746 - +0.1 951,769 + -1.2 951,774 - +0.3 951,775 + +1.0 951,789 + +0.2 951,790 - -0.3
Or see this region's nucleotide sequence