Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03795 and CA264_03800 are separated by 352 nucleotides CA264_03800 and CA264_03805 are separated by 23 nucleotides
CA264_03795: CA264_03795 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 888,054 to 888,788
_03795
CA264_03800: CA264_03800 - hypothetical protein, at 889,141 to 889,491
_03800
CA264_03805: CA264_03805 - serine protease, at 889,515 to 890,885
_03805
Position (kb) 889
890 Strain fitness (log2 ratio) -2
-1
0
1 at 888.780 kb on + strand at 888.795 kb on + strand at 888.796 kb on - strand at 888.803 kb on - strand at 888.821 kb on - strand at 888.905 kb on + strand at 888.991 kb on + strand at 889.042 kb on - strand at 889.042 kb on - strand at 889.058 kb on - strand at 889.073 kb on + strand at 889.076 kb on + strand at 889.077 kb on - strand at 889.077 kb on - strand at 889.078 kb on + strand at 889.095 kb on + strand at 889.140 kb on - strand at 889.145 kb on - strand at 889.238 kb on + strand, within CA264_03800 at 889.238 kb on + strand, within CA264_03800 at 889.310 kb on + strand, within CA264_03800 at 889.324 kb on + strand, within CA264_03800 at 889.324 kb on + strand, within CA264_03800 at 889.358 kb on - strand, within CA264_03800 at 889.376 kb on - strand, within CA264_03800 at 889.505 kb on + strand at 889.505 kb on + strand at 889.506 kb on - strand at 889.506 kb on - strand at 889.534 kb on - strand at 889.624 kb on + strand at 889.625 kb on - strand at 889.630 kb on - strand at 889.630 kb on - strand at 889.630 kb on - strand at 889.639 kb on - strand at 889.639 kb on - strand at 889.644 kb on - strand at 889.673 kb on - strand, within CA264_03805 at 889.769 kb on + strand, within CA264_03805 at 889.769 kb on + strand, within CA264_03805 at 889.769 kb on + strand, within CA264_03805 at 889.769 kb on + strand, within CA264_03805 at 889.851 kb on - strand, within CA264_03805 at 889.927 kb on - strand, within CA264_03805 at 889.959 kb on - strand, within CA264_03805 at 890.056 kb on + strand, within CA264_03805 at 890.056 kb on + strand, within CA264_03805 at 890.057 kb on - strand, within CA264_03805 at 890.059 kb on + strand, within CA264_03805 at 890.060 kb on - strand, within CA264_03805 at 890.060 kb on - strand, within CA264_03805 at 890.060 kb on - strand, within CA264_03805 at 890.060 kb on - strand, within CA264_03805 at 890.071 kb on + strand, within CA264_03805 at 890.072 kb on - strand, within CA264_03805 at 890.113 kb on - strand, within CA264_03805 at 890.137 kb on + strand, within CA264_03805 at 890.153 kb on + strand, within CA264_03805 at 890.337 kb on - strand, within CA264_03805 at 890.368 kb on - strand, within CA264_03805 at 890.368 kb on - strand, within CA264_03805 at 890.435 kb on + strand, within CA264_03805 at 890.449 kb on + strand, within CA264_03805 at 890.449 kb on + strand, within CA264_03805 at 890.449 kb on + strand, within CA264_03805 at 890.450 kb on - strand, within CA264_03805 at 890.458 kb on + strand, within CA264_03805 at 890.459 kb on - strand, within CA264_03805
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 888,780 + -0.5 888,795 + -0.2 888,796 - -0.3 888,803 - -0.9 888,821 - -1.7 888,905 + -0.0 888,991 + -0.7 889,042 - -1.1 889,042 - +0.2 889,058 - -1.3 889,073 + +0.3 889,076 + -1.0 889,077 - -1.3 889,077 - +0.9 889,078 + -0.6 889,095 + -0.4 889,140 - +0.7 889,145 - +0.1 889,238 + CA264_03800 0.28 -2.1 889,238 + CA264_03800 0.28 +0.1 889,310 + CA264_03800 0.48 -0.8 889,324 + CA264_03800 0.52 +0.3 889,324 + CA264_03800 0.52 -0.3 889,358 - CA264_03800 0.62 +0.7 889,376 - CA264_03800 0.67 -0.3 889,505 + +0.2 889,505 + -0.3 889,506 - +0.2 889,506 - -2.3 889,534 - -0.3 889,624 + -1.3 889,625 - -0.5 889,630 - -0.1 889,630 - +0.5 889,630 - +1.0 889,639 - -0.1 889,639 - +0.9 889,644 - -2.0 889,673 - CA264_03805 0.12 +0.3 889,769 + CA264_03805 0.19 +0.4 889,769 + CA264_03805 0.19 +1.0 889,769 + CA264_03805 0.19 -0.4 889,769 + CA264_03805 0.19 +0.3 889,851 - CA264_03805 0.25 -0.3 889,927 - CA264_03805 0.30 -2.4 889,959 - CA264_03805 0.32 -0.3 890,056 + CA264_03805 0.39 +0.9 890,056 + CA264_03805 0.39 +1.3 890,057 - CA264_03805 0.40 -0.3 890,059 + CA264_03805 0.40 +0.4 890,060 - CA264_03805 0.40 -0.6 890,060 - CA264_03805 0.40 +0.6 890,060 - CA264_03805 0.40 -0.9 890,060 - CA264_03805 0.40 +0.0 890,071 + CA264_03805 0.41 +0.4 890,072 - CA264_03805 0.41 +0.2 890,113 - CA264_03805 0.44 -0.1 890,137 + CA264_03805 0.45 +0.4 890,153 + CA264_03805 0.47 +1.1 890,337 - CA264_03805 0.60 +0.3 890,368 - CA264_03805 0.62 +0.9 890,368 - CA264_03805 0.62 -0.1 890,435 + CA264_03805 0.67 -1.5 890,449 + CA264_03805 0.68 +0.6 890,449 + CA264_03805 0.68 +0.4 890,449 + CA264_03805 0.68 -1.0 890,450 - CA264_03805 0.68 +0.9 890,458 + CA264_03805 0.69 +0.2 890,459 - CA264_03805 0.69 -1.0
Or see this region's nucleotide sequence