Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01380 and CA264_01385 are separated by 96 nucleotides CA264_01385 and CA264_01390 overlap by 1 nucleotides CA264_01390 and CA264_01395 are separated by 0 nucleotides CA264_01395 and CA264_01400 are separated by 73 nucleotides
CA264_01380: CA264_01380 - ADP-L-glycero-D-mannoheptose-6-epimerase, at 329,926 to 330,891
_01380
CA264_01385: CA264_01385 - iron ABC transporter substrate-binding protein, at 330,988 to 331,869
_01385
CA264_01390: CA264_01390 - iron ABC transporter permease, at 331,869 to 332,876
_01390
CA264_01395: CA264_01395 - 6-carboxytetrahydropterin synthase QueD, at 332,877 to 333,299
_01395
CA264_01400: CA264_01400 - lipid-A-disaccharide synthase, at 333,373 to 334,494
_01400
Position (kb) 331
332
333 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 330.883 kb on + strand at 330.886 kb on + strand at 330.999 kb on - strand at 331.070 kb on + strand at 331.182 kb on + strand, within CA264_01385 at 331.182 kb on + strand, within CA264_01385 at 331.183 kb on - strand, within CA264_01385 at 331.187 kb on + strand, within CA264_01385 at 331.195 kb on - strand, within CA264_01385 at 331.261 kb on + strand, within CA264_01385 at 331.261 kb on + strand, within CA264_01385 at 331.262 kb on - strand, within CA264_01385 at 331.314 kb on + strand, within CA264_01385 at 331.314 kb on + strand, within CA264_01385 at 331.364 kb on - strand, within CA264_01385 at 331.375 kb on + strand, within CA264_01385 at 331.555 kb on + strand, within CA264_01385 at 331.555 kb on + strand, within CA264_01385 at 331.555 kb on + strand, within CA264_01385 at 331.555 kb on + strand, within CA264_01385 at 331.556 kb on - strand, within CA264_01385 at 331.582 kb on - strand, within CA264_01385 at 331.587 kb on + strand, within CA264_01385 at 331.588 kb on - strand, within CA264_01385 at 331.663 kb on + strand, within CA264_01385 at 331.664 kb on - strand, within CA264_01385 at 331.670 kb on + strand, within CA264_01385 at 331.766 kb on - strand, within CA264_01385 at 331.766 kb on - strand, within CA264_01385 at 331.783 kb on + strand at 331.784 kb on - strand at 331.796 kb on - strand at 331.803 kb on - strand at 331.884 kb on + strand at 331.891 kb on + strand at 331.891 kb on + strand at 331.969 kb on + strand at 332.048 kb on - strand, within CA264_01390 at 332.048 kb on - strand, within CA264_01390 at 332.107 kb on + strand, within CA264_01390 at 332.108 kb on - strand, within CA264_01390 at 332.112 kb on - strand, within CA264_01390 at 332.112 kb on - strand, within CA264_01390 at 332.131 kb on - strand, within CA264_01390 at 332.333 kb on + strand, within CA264_01390 at 332.353 kb on + strand, within CA264_01390 at 332.353 kb on + strand, within CA264_01390 at 332.354 kb on - strand, within CA264_01390 at 332.354 kb on - strand, within CA264_01390 at 332.354 kb on - strand, within CA264_01390 at 332.527 kb on + strand, within CA264_01390 at 332.527 kb on + strand, within CA264_01390 at 332.528 kb on - strand, within CA264_01390 at 332.528 kb on - strand, within CA264_01390 at 332.660 kb on + strand, within CA264_01390 at 332.741 kb on + strand, within CA264_01390 at 332.807 kb on - strand at 332.836 kb on + strand at 332.874 kb on + strand at 332.954 kb on + strand, within CA264_01395 at 333.003 kb on + strand, within CA264_01395 at 333.004 kb on - strand, within CA264_01395 at 333.116 kb on + strand, within CA264_01395 at 333.259 kb on - strand at 333.281 kb on - strand at 333.285 kb on + strand at 333.298 kb on - strand at 333.321 kb on + strand at 333.334 kb on + strand at 333.344 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 330,883 + +0.1 330,886 + +0.2 330,999 - +0.2 331,070 + +0.5 331,182 + CA264_01385 0.22 +1.5 331,182 + CA264_01385 0.22 +0.7 331,183 - CA264_01385 0.22 -2.3 331,187 + CA264_01385 0.23 -0.6 331,195 - CA264_01385 0.23 +0.1 331,261 + CA264_01385 0.31 +0.2 331,261 + CA264_01385 0.31 +1.3 331,262 - CA264_01385 0.31 +0.1 331,314 + CA264_01385 0.37 -0.1 331,314 + CA264_01385 0.37 +0.9 331,364 - CA264_01385 0.43 +0.7 331,375 + CA264_01385 0.44 +0.5 331,555 + CA264_01385 0.64 +0.2 331,555 + CA264_01385 0.64 +0.0 331,555 + CA264_01385 0.64 -1.9 331,555 + CA264_01385 0.64 +2.2 331,556 - CA264_01385 0.64 +0.9 331,582 - CA264_01385 0.67 +1.2 331,587 + CA264_01385 0.68 +0.0 331,588 - CA264_01385 0.68 +0.5 331,663 + CA264_01385 0.77 +0.2 331,664 - CA264_01385 0.77 +0.8 331,670 + CA264_01385 0.77 +0.2 331,766 - CA264_01385 0.88 +1.4 331,766 - CA264_01385 0.88 +1.9 331,783 + -0.7 331,784 - -1.4 331,796 - -0.8 331,803 - -0.2 331,884 + -0.7 331,891 + +0.2 331,891 + -0.4 331,969 + +2.1 332,048 - CA264_01390 0.18 -0.4 332,048 - CA264_01390 0.18 +0.6 332,107 + CA264_01390 0.24 -1.3 332,108 - CA264_01390 0.24 +0.4 332,112 - CA264_01390 0.24 +0.2 332,112 - CA264_01390 0.24 -3.2 332,131 - CA264_01390 0.26 -0.8 332,333 + CA264_01390 0.46 +0.5 332,353 + CA264_01390 0.48 +0.6 332,353 + CA264_01390 0.48 +0.0 332,354 - CA264_01390 0.48 -0.2 332,354 - CA264_01390 0.48 +0.9 332,354 - CA264_01390 0.48 -0.0 332,527 + CA264_01390 0.65 -0.4 332,527 + CA264_01390 0.65 +0.5 332,528 - CA264_01390 0.65 +0.5 332,528 - CA264_01390 0.65 +1.2 332,660 + CA264_01390 0.78 -0.7 332,741 + CA264_01390 0.87 +1.3 332,807 - +2.0 332,836 + -1.9 332,874 + +0.1 332,954 + CA264_01395 0.18 -0.4 333,003 + CA264_01395 0.30 +0.7 333,004 - CA264_01395 0.30 +1.9 333,116 + CA264_01395 0.57 -0.3 333,259 - -0.3 333,281 - -1.0 333,285 + +0.6 333,298 - +2.5 333,321 + +0.0 333,334 + +0.1 333,344 + -2.9
Or see this region's nucleotide sequence