Experiment: m.b. Nalidixic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00445 and CA264_00450 are separated by 153 nucleotides CA264_00450 and CA264_00455 overlap by 52 nucleotides CA264_00455 and CA264_00460 are separated by 3 nucleotides CA264_00460 and CA264_00465 are separated by 72 nucleotides
CA264_00445: CA264_00445 - hypothetical protein, at 95,527 to 97,518
_00445
CA264_00450: CA264_00450 - bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, at 97,672 to 98,394
_00450
CA264_00455: CA264_00455 - PorT-like protein, at 98,343 to 99,113
_00455
CA264_00460: CA264_00460 - NAD(P)-dependent oxidoreductase, at 99,117 to 99,869
_00460
CA264_00465: CA264_00465 - DNA mismatch repair protein MutT, at 99,942 to 100,340
_00465
Position (kb) 98
99
100 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 97.371 kb on - strand at 97.485 kb on + strand at 97.485 kb on + strand at 97.486 kb on - strand at 97.551 kb on - strand at 97.551 kb on - strand at 97.552 kb on + strand at 97.552 kb on + strand at 97.621 kb on + strand at 97.622 kb on - strand at 97.629 kb on + strand at 97.630 kb on - strand at 97.659 kb on + strand at 97.660 kb on - strand at 97.683 kb on - strand at 98.514 kb on + strand, within CA264_00455 at 98.539 kb on - strand, within CA264_00455 at 98.562 kb on + strand, within CA264_00455 at 98.599 kb on + strand, within CA264_00455 at 98.662 kb on - strand, within CA264_00455 at 98.697 kb on + strand, within CA264_00455 at 98.697 kb on + strand, within CA264_00455 at 98.725 kb on + strand, within CA264_00455 at 98.725 kb on + strand, within CA264_00455 at 98.755 kb on + strand, within CA264_00455 at 98.800 kb on + strand, within CA264_00455 at 98.808 kb on + strand, within CA264_00455 at 98.841 kb on + strand, within CA264_00455 at 98.841 kb on + strand, within CA264_00455 at 98.976 kb on + strand, within CA264_00455 at 98.976 kb on + strand, within CA264_00455 at 98.976 kb on + strand, within CA264_00455 at 98.977 kb on - strand, within CA264_00455 at 98.977 kb on - strand, within CA264_00455 at 98.981 kb on + strand, within CA264_00455 at 99.027 kb on + strand, within CA264_00455 at 99.029 kb on + strand, within CA264_00455 at 99.030 kb on - strand, within CA264_00455 at 99.030 kb on - strand, within CA264_00455 at 99.030 kb on - strand, within CA264_00455 at 99.051 kb on + strand at 99.061 kb on - strand at 99.111 kb on + strand at 99.278 kb on + strand, within CA264_00460 at 99.464 kb on - strand, within CA264_00460 at 99.527 kb on + strand, within CA264_00460 at 99.528 kb on - strand, within CA264_00460 at 99.544 kb on + strand, within CA264_00460 at 99.544 kb on + strand, within CA264_00460 at 99.545 kb on - strand, within CA264_00460 at 99.547 kb on - strand, within CA264_00460 at 99.650 kb on - strand, within CA264_00460 at 99.722 kb on - strand, within CA264_00460 at 99.723 kb on + strand, within CA264_00460 at 99.724 kb on - strand, within CA264_00460 at 99.849 kb on - strand at 99.879 kb on + strand at 99.879 kb on + strand at 99.882 kb on - strand at 99.882 kb on - strand at 99.908 kb on + strand at 100.019 kb on - strand, within CA264_00465 at 100.029 kb on + strand, within CA264_00465 at 100.030 kb on - strand, within CA264_00465 at 100.030 kb on - strand, within CA264_00465 at 100.041 kb on + strand, within CA264_00465 at 100.042 kb on - strand, within CA264_00465 at 100.085 kb on - strand, within CA264_00465
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.016 mg/ml remove 97,371 - -1.9 97,485 + -0.1 97,485 + +0.3 97,486 - +0.1 97,551 - +1.1 97,551 - -0.7 97,552 + -1.9 97,552 + -0.4 97,621 + +0.1 97,622 - -1.0 97,629 + +1.4 97,630 - -0.0 97,659 + +0.9 97,660 - +0.2 97,683 - +0.3 98,514 + CA264_00455 0.22 -1.0 98,539 - CA264_00455 0.25 -0.9 98,562 + CA264_00455 0.28 -1.0 98,599 + CA264_00455 0.33 -3.5 98,662 - CA264_00455 0.41 +0.3 98,697 + CA264_00455 0.46 -1.7 98,697 + CA264_00455 0.46 -0.1 98,725 + CA264_00455 0.50 -0.1 98,725 + CA264_00455 0.50 -0.7 98,755 + CA264_00455 0.53 -0.4 98,800 + CA264_00455 0.59 -1.0 98,808 + CA264_00455 0.60 -0.6 98,841 + CA264_00455 0.65 -2.8 98,841 + CA264_00455 0.65 -1.7 98,976 + CA264_00455 0.82 -2.1 98,976 + CA264_00455 0.82 -2.3 98,976 + CA264_00455 0.82 -1.0 98,977 - CA264_00455 0.82 +0.5 98,977 - CA264_00455 0.82 -1.7 98,981 + CA264_00455 0.83 -0.5 99,027 + CA264_00455 0.89 -1.3 99,029 + CA264_00455 0.89 -1.9 99,030 - CA264_00455 0.89 -1.5 99,030 - CA264_00455 0.89 -0.1 99,030 - CA264_00455 0.89 -2.7 99,051 + -0.7 99,061 - +2.5 99,111 + -0.6 99,278 + CA264_00460 0.21 +0.3 99,464 - CA264_00460 0.46 +0.5 99,527 + CA264_00460 0.54 +0.1 99,528 - CA264_00460 0.55 -0.3 99,544 + CA264_00460 0.57 +1.8 99,544 + CA264_00460 0.57 -1.4 99,545 - CA264_00460 0.57 -0.3 99,547 - CA264_00460 0.57 -0.1 99,650 - CA264_00460 0.71 +1.4 99,722 - CA264_00460 0.80 -0.1 99,723 + CA264_00460 0.80 +0.3 99,724 - CA264_00460 0.81 +0.8 99,849 - -0.7 99,879 + +0.9 99,879 + -0.4 99,882 - +0.3 99,882 - -0.1 99,908 + -0.7 100,019 - CA264_00465 0.19 -0.1 100,029 + CA264_00465 0.22 +0.5 100,030 - CA264_00465 0.22 -2.7 100,030 - CA264_00465 0.22 -0.7 100,041 + CA264_00465 0.25 +0.7 100,042 - CA264_00465 0.25 +0.8 100,085 - CA264_00465 0.36 +0.6
Or see this region's nucleotide sequence