Experiment: D-Glucosamine Hydrochloride (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_991 and PfGW456L13_992 overlap by 8 nucleotides PfGW456L13_992 and PfGW456L13_993 are separated by 342 nucleotides
PfGW456L13_991 - FIG015287: Zinc protease, at 1,105,730 to 1,107,220
_991
PfGW456L13_992 - FIG015547: peptidase, M16 family, at 1,107,213 to 1,108,568
_992
PfGW456L13_993 - Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1), at 1,108,911 to 1,110,452
_993
Position (kb)
1107
1108
1109 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1106.269 kb on - strand, within PfGW456L13_991 at 1106.490 kb on + strand, within PfGW456L13_991 at 1106.490 kb on + strand, within PfGW456L13_991 at 1106.490 kb on + strand, within PfGW456L13_991 at 1106.571 kb on + strand, within PfGW456L13_991 at 1106.586 kb on + strand, within PfGW456L13_991 at 1106.586 kb on + strand, within PfGW456L13_991 at 1106.586 kb on + strand, within PfGW456L13_991 at 1106.586 kb on + strand, within PfGW456L13_991 at 1106.586 kb on + strand, within PfGW456L13_991 at 1106.586 kb on + strand, within PfGW456L13_991 at 1106.586 kb on + strand, within PfGW456L13_991 at 1106.587 kb on - strand, within PfGW456L13_991 at 1106.587 kb on - strand, within PfGW456L13_991 at 1106.587 kb on - strand, within PfGW456L13_991 at 1106.587 kb on - strand, within PfGW456L13_991 at 1106.587 kb on - strand, within PfGW456L13_991 at 1106.641 kb on - strand, within PfGW456L13_991 at 1106.765 kb on - strand, within PfGW456L13_991 at 1107.144 kb on + strand at 1107.144 kb on + strand at 1107.144 kb on + strand at 1107.145 kb on - strand at 1107.145 kb on - strand at 1107.145 kb on - strand at 1107.145 kb on - strand at 1107.208 kb on + strand at 1107.240 kb on + strand at 1107.240 kb on + strand at 1107.240 kb on + strand at 1107.240 kb on + strand at 1107.240 kb on + strand at 1107.240 kb on + strand at 1107.240 kb on + strand at 1107.240 kb on + strand at 1107.240 kb on + strand at 1107.240 kb on + strand at 1107.240 kb on + strand at 1107.241 kb on - strand at 1107.241 kb on - strand at 1107.241 kb on - strand at 1107.241 kb on - strand at 1107.241 kb on - strand at 1107.241 kb on - strand at 1107.241 kb on - strand at 1107.241 kb on - strand at 1107.274 kb on + strand at 1107.274 kb on + strand at 1107.274 kb on + strand at 1107.274 kb on + strand at 1107.274 kb on + strand at 1107.275 kb on - strand at 1107.588 kb on - strand, within PfGW456L13_992 at 1107.589 kb on + strand, within PfGW456L13_992 at 1107.589 kb on + strand, within PfGW456L13_992 at 1107.589 kb on + strand, within PfGW456L13_992 at 1107.590 kb on - strand, within PfGW456L13_992 at 1107.598 kb on + strand, within PfGW456L13_992 at 1107.871 kb on + strand, within PfGW456L13_992 at 1107.872 kb on - strand, within PfGW456L13_992 at 1107.946 kb on + strand, within PfGW456L13_992 at 1107.946 kb on + strand, within PfGW456L13_992 at 1107.946 kb on + strand, within PfGW456L13_992 at 1107.946 kb on + strand, within PfGW456L13_992 at 1107.946 kb on + strand, within PfGW456L13_992 at 1107.947 kb on - strand, within PfGW456L13_992 at 1107.947 kb on - strand, within PfGW456L13_992 at 1108.016 kb on + strand, within PfGW456L13_992 at 1108.017 kb on - strand, within PfGW456L13_992 at 1108.066 kb on + strand, within PfGW456L13_992 at 1108.226 kb on - strand, within PfGW456L13_992 at 1108.226 kb on - strand, within PfGW456L13_992 at 1108.226 kb on - strand, within PfGW456L13_992 at 1108.228 kb on + strand, within PfGW456L13_992 at 1108.228 kb on + strand, within PfGW456L13_992 at 1108.229 kb on - strand, within PfGW456L13_992 at 1108.229 kb on - strand, within PfGW456L13_992 at 1108.361 kb on + strand, within PfGW456L13_992 at 1108.362 kb on - strand, within PfGW456L13_992 at 1108.364 kb on + strand, within PfGW456L13_992 at 1108.378 kb on + strand, within PfGW456L13_992 at 1108.378 kb on + strand, within PfGW456L13_992 at 1108.396 kb on + strand, within PfGW456L13_992 at 1108.397 kb on - strand, within PfGW456L13_992 at 1108.604 kb on + strand at 1108.605 kb on - strand at 1108.605 kb on - strand at 1108.633 kb on + strand at 1108.633 kb on + strand at 1108.725 kb on + strand at 1108.856 kb on + strand at 1108.856 kb on + strand at 1108.856 kb on + strand at 1108.856 kb on + strand at 1108.860 kb on + strand at 1108.860 kb on + strand at 1108.860 kb on + strand at 1109.059 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C) remove 1,106,269 - PfGW456L13_991 0.36 +0.3 1,106,490 + PfGW456L13_991 0.51 +0.0 1,106,490 + PfGW456L13_991 0.51 -0.6 1,106,490 + PfGW456L13_991 0.51 +0.4 1,106,571 + PfGW456L13_991 0.56 +0.8 1,106,586 + PfGW456L13_991 0.57 -1.3 1,106,586 + PfGW456L13_991 0.57 -0.1 1,106,586 + PfGW456L13_991 0.57 -1.7 1,106,586 + PfGW456L13_991 0.57 +0.5 1,106,586 + PfGW456L13_991 0.57 +0.6 1,106,586 + PfGW456L13_991 0.57 -0.4 1,106,586 + PfGW456L13_991 0.57 -0.4 1,106,587 - PfGW456L13_991 0.57 +0.0 1,106,587 - PfGW456L13_991 0.57 +0.9 1,106,587 - PfGW456L13_991 0.57 +0.3 1,106,587 - PfGW456L13_991 0.57 +1.5 1,106,587 - PfGW456L13_991 0.57 +1.1 1,106,641 - PfGW456L13_991 0.61 -0.6 1,106,765 - PfGW456L13_991 0.69 -0.4 1,107,144 + +0.9 1,107,144 + -0.9 1,107,144 + +0.4 1,107,145 - -0.5 1,107,145 - -0.8 1,107,145 - +0.5 1,107,145 - -0.7 1,107,208 + +0.3 1,107,240 + -0.6 1,107,240 + -1.0 1,107,240 + +1.1 1,107,240 + +1.1 1,107,240 + -1.2 1,107,240 + -2.6 1,107,240 + -0.2 1,107,240 + +1.6 1,107,240 + +1.1 1,107,240 + -0.7 1,107,240 + -1.1 1,107,241 - -2.0 1,107,241 - +0.9 1,107,241 - -0.7 1,107,241 - +0.5 1,107,241 - +0.8 1,107,241 - +0.4 1,107,241 - -1.5 1,107,241 - -0.5 1,107,274 + +0.1 1,107,274 + +1.8 1,107,274 + +0.3 1,107,274 + +1.6 1,107,274 + +0.9 1,107,275 - +0.7 1,107,588 - PfGW456L13_992 0.28 -0.2 1,107,589 + PfGW456L13_992 0.28 -0.0 1,107,589 + PfGW456L13_992 0.28 +0.2 1,107,589 + PfGW456L13_992 0.28 -2.0 1,107,590 - PfGW456L13_992 0.28 +1.4 1,107,598 + PfGW456L13_992 0.28 -2.3 1,107,871 + PfGW456L13_992 0.49 -0.7 1,107,872 - PfGW456L13_992 0.49 -0.9 1,107,946 + PfGW456L13_992 0.54 -1.2 1,107,946 + PfGW456L13_992 0.54 -1.2 1,107,946 + PfGW456L13_992 0.54 +0.6 1,107,946 + PfGW456L13_992 0.54 +1.0 1,107,946 + PfGW456L13_992 0.54 +0.0 1,107,947 - PfGW456L13_992 0.54 +0.3 1,107,947 - PfGW456L13_992 0.54 +1.2 1,108,016 + PfGW456L13_992 0.59 -0.8 1,108,017 - PfGW456L13_992 0.59 -1.2 1,108,066 + PfGW456L13_992 0.63 -0.5 1,108,226 - PfGW456L13_992 0.75 +0.7 1,108,226 - PfGW456L13_992 0.75 -0.6 1,108,226 - PfGW456L13_992 0.75 -0.6 1,108,228 + PfGW456L13_992 0.75 -1.4 1,108,228 + PfGW456L13_992 0.75 +0.0 1,108,229 - PfGW456L13_992 0.75 +0.0 1,108,229 - PfGW456L13_992 0.75 +0.2 1,108,361 + PfGW456L13_992 0.85 +0.2 1,108,362 - PfGW456L13_992 0.85 -0.4 1,108,364 + PfGW456L13_992 0.85 -0.9 1,108,378 + PfGW456L13_992 0.86 +0.8 1,108,378 + PfGW456L13_992 0.86 +1.6 1,108,396 + PfGW456L13_992 0.87 -0.2 1,108,397 - PfGW456L13_992 0.87 +0.4 1,108,604 + -0.1 1,108,605 - +0.9 1,108,605 - -0.8 1,108,633 + +0.6 1,108,633 + +0.6 1,108,725 + +0.0 1,108,856 + +0.9 1,108,856 + +0.1 1,108,856 + -0.3 1,108,856 + -1.6 1,108,860 + -0.5 1,108,860 + -0.3 1,108,860 + +0.1 1,109,059 + -1.8
Or see this region's nucleotide sequence