Experiment: D-Glucosamine Hydrochloride (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4079 and PfGW456L13_4080 are separated by 222 nucleotides PfGW456L13_4080 and PfGW456L13_4081 are separated by 212 nucleotides
PfGW456L13_4079 - FIG00954563: hypothetical protein, at 4,578,459 to 4,579,625
_4079
PfGW456L13_4080 - DNA ligase (EC 6.5.1.2), at 4,579,848 to 4,582,205
_4080
PfGW456L13_4081 - Cell division protein ZipA, at 4,582,418 to 4,583,272
_4081
Position (kb)
4579
4580
4581
4582
4583 Strain fitness (log2 ratio)
-2
-1
0
1 at 4578.892 kb on + strand, within PfGW456L13_4079 at 4578.892 kb on + strand, within PfGW456L13_4079 at 4578.892 kb on + strand, within PfGW456L13_4079 at 4578.892 kb on + strand, within PfGW456L13_4079 at 4578.892 kb on + strand, within PfGW456L13_4079 at 4578.893 kb on - strand, within PfGW456L13_4079 at 4578.893 kb on - strand, within PfGW456L13_4079 at 4578.893 kb on - strand, within PfGW456L13_4079 at 4578.893 kb on - strand, within PfGW456L13_4079 at 4578.893 kb on - strand, within PfGW456L13_4079 at 4578.893 kb on - strand at 4578.967 kb on + strand, within PfGW456L13_4079 at 4578.968 kb on - strand, within PfGW456L13_4079 at 4578.968 kb on - strand, within PfGW456L13_4079 at 4578.968 kb on - strand, within PfGW456L13_4079 at 4578.968 kb on - strand, within PfGW456L13_4079 at 4578.968 kb on - strand, within PfGW456L13_4079 at 4578.970 kb on + strand, within PfGW456L13_4079 at 4578.970 kb on + strand, within PfGW456L13_4079 at 4578.971 kb on - strand, within PfGW456L13_4079 at 4578.971 kb on - strand, within PfGW456L13_4079 at 4578.971 kb on - strand, within PfGW456L13_4079 at 4579.188 kb on + strand, within PfGW456L13_4079 at 4579.189 kb on - strand, within PfGW456L13_4079 at 4579.346 kb on + strand, within PfGW456L13_4079 at 4579.346 kb on + strand, within PfGW456L13_4079 at 4579.347 kb on - strand, within PfGW456L13_4079 at 4579.621 kb on + strand at 4579.621 kb on + strand at 4579.621 kb on + strand at 4579.622 kb on - strand at 4579.655 kb on + strand at 4579.655 kb on + strand at 4579.655 kb on + strand at 4579.655 kb on + strand at 4579.655 kb on + strand at 4579.655 kb on + strand at 4579.656 kb on - strand at 4579.656 kb on - strand at 4579.656 kb on - strand at 4579.656 kb on - strand at 4579.796 kb on - strand at 4579.796 kb on - strand at 4579.849 kb on + strand at 4582.255 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C) remove 4,578,892 + PfGW456L13_4079 0.37 +0.5 4,578,892 + PfGW456L13_4079 0.37 -1.2 4,578,892 + PfGW456L13_4079 0.37 +0.7 4,578,892 + PfGW456L13_4079 0.37 -0.3 4,578,892 + PfGW456L13_4079 0.37 -0.2 4,578,893 - PfGW456L13_4079 0.37 -0.3 4,578,893 - PfGW456L13_4079 0.37 -0.0 4,578,893 - PfGW456L13_4079 0.37 +1.1 4,578,893 - PfGW456L13_4079 0.37 -0.0 4,578,893 - PfGW456L13_4079 0.37 -0.4 4,578,893 - +0.6 4,578,967 + PfGW456L13_4079 0.44 +1.2 4,578,968 - PfGW456L13_4079 0.44 -0.6 4,578,968 - PfGW456L13_4079 0.44 -0.0 4,578,968 - PfGW456L13_4079 0.44 -0.6 4,578,968 - PfGW456L13_4079 0.44 -0.2 4,578,968 - PfGW456L13_4079 0.44 -0.0 4,578,970 + PfGW456L13_4079 0.44 -0.8 4,578,970 + PfGW456L13_4079 0.44 +0.2 4,578,971 - PfGW456L13_4079 0.44 +0.7 4,578,971 - PfGW456L13_4079 0.44 -0.6 4,578,971 - PfGW456L13_4079 0.44 +0.4 4,579,188 + PfGW456L13_4079 0.62 +0.3 4,579,189 - PfGW456L13_4079 0.63 -0.6 4,579,346 + PfGW456L13_4079 0.76 -2.1 4,579,346 + PfGW456L13_4079 0.76 -0.5 4,579,347 - PfGW456L13_4079 0.76 -1.1 4,579,621 + +1.2 4,579,621 + +0.9 4,579,621 + -0.6 4,579,622 - +0.7 4,579,655 + +1.3 4,579,655 + -1.5 4,579,655 + +0.9 4,579,655 + -0.3 4,579,655 + +0.7 4,579,655 + +0.6 4,579,656 - -1.6 4,579,656 - -0.9 4,579,656 - -1.3 4,579,656 - +0.4 4,579,796 - -0.4 4,579,796 - +1.1 4,579,849 + -0.0 4,582,255 + -0.6
Or see this region's nucleotide sequence