Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1504

Experiment: D-Glucosamine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (C)
1,654,212	+		PfGW456L13_1502	0.56	+0.1
1,654,212	+		PfGW456L13_1502	0.56	+0.6
1,654,212	+		PfGW456L13_1502	0.56	+0.2
1,654,212	+		PfGW456L13_1502	0.56	-1.2
1,654,213	-		PfGW456L13_1502	0.56	+0.1
1,654,213	-		PfGW456L13_1502	0.56	+0.8
1,654,213	-		PfGW456L13_1502	0.56	-0.4
1,654,213	-		PfGW456L13_1502	0.56	-0.7
1,654,213	-		PfGW456L13_1502	0.56	-0.3
1,654,213	-		PfGW456L13_1502	0.56	+0.6
1,654,216	+		PfGW456L13_1502	0.56	-0.7
1,654,216	+		PfGW456L13_1502	0.56	+1.0
1,654,216	+		PfGW456L13_1502	0.56	-0.2
1,654,216	+		PfGW456L13_1502	0.56	-0.9
1,654,216	+		PfGW456L13_1502	0.56	-1.5
1,654,216	+		PfGW456L13_1502	0.56	+0.0
1,654,217	-				+1.4
1,654,217	-		PfGW456L13_1502	0.56	-0.1
1,654,217	-		PfGW456L13_1502	0.56	+0.5
1,654,217	-		PfGW456L13_1502	0.56	+0.2
1,654,217	-		PfGW456L13_1502	0.56	-1.0
1,654,217	-		PfGW456L13_1502	0.56	-0.0
1,654,217	-		PfGW456L13_1502	0.56	-0.7
1,654,238	+		PfGW456L13_1502	0.58	+3.0
1,654,239	-		PfGW456L13_1502	0.58	-0.7
1,654,291	+		PfGW456L13_1502	0.62	-0.0
1,654,292	-		PfGW456L13_1502	0.62	+0.3
1,654,292	-		PfGW456L13_1502	0.62	+1.2
1,654,380	+		PfGW456L13_1502	0.69	+0.4
1,654,380	+		PfGW456L13_1502	0.69	-0.1
1,654,381	-		PfGW456L13_1502	0.69	+0.0
1,654,387	+		PfGW456L13_1502	0.70	-1.0
1,654,433	+		PfGW456L13_1502	0.73	+0.0
1,654,434	-		PfGW456L13_1502	0.73	-0.7
1,654,434	-		PfGW456L13_1502	0.73	+3.0
1,654,434	-		PfGW456L13_1502	0.73	-0.1
1,654,474	+		PfGW456L13_1502	0.76	-0.2
1,654,474	+		PfGW456L13_1502	0.76	+1.4
1,654,474	+		PfGW456L13_1502	0.76	-1.0
1,654,474	+		PfGW456L13_1502	0.76	-0.7
1,654,474	+		PfGW456L13_1502	0.76	-1.6
1,654,475	-		PfGW456L13_1502	0.76	-0.5
1,654,475	-		PfGW456L13_1502	0.76	-1.1
1,654,522	+		PfGW456L13_1502	0.80	-1.0
1,654,523	-		PfGW456L13_1502	0.80	+3.0
1,654,523	-		PfGW456L13_1502	0.80	+0.1
1,654,538	+		PfGW456L13_1502	0.81	-0.9
1,654,570	+		PfGW456L13_1502	0.84	+1.2
1,654,570	+		PfGW456L13_1502	0.84	+0.1
1,654,571	-		PfGW456L13_1502	0.84	-0.9
1,654,571	-		PfGW456L13_1502	0.84	+0.2
1,654,571	-		PfGW456L13_1502	0.84	+2.0
1,654,606	+		PfGW456L13_1502	0.87	+0.8
1,654,606	+		PfGW456L13_1502	0.87	+0.2
1,654,645	+		PfGW456L13_1502	0.90	+0.6
1,654,645	+		PfGW456L13_1502	0.90	+0.5
1,654,646	-		PfGW456L13_1502	0.90	+0.1
1,654,646	-		PfGW456L13_1502	0.90	+0.7
1,654,646	-		PfGW456L13_1502	0.90	-0.6
1,654,646	-		PfGW456L13_1502	0.90	+0.2
1,654,646	-		PfGW456L13_1502	0.90	-1.0
1,654,646	-		PfGW456L13_1502	0.90	+1.0
1,654,714	+				-0.0
1,654,753	+				-0.7
1,654,754	-				+0.0
1,654,754	-				+0.7
1,654,754	-				+0.1
1,654,817	+		PfGW456L13_1503	0.14	+0.2
1,654,817	+		PfGW456L13_1503	0.14	-1.2
1,654,817	+		PfGW456L13_1503	0.14	-1.1
1,654,817	+		PfGW456L13_1503	0.14	+1.4
1,654,817	+		PfGW456L13_1503	0.14	-1.1
1,654,817	+		PfGW456L13_1503	0.14	-1.0
1,654,817	+		PfGW456L13_1503	0.14	+0.1
1,654,817	+		PfGW456L13_1503	0.14	-0.1
1,654,818	-		PfGW456L13_1503	0.14	+2.4
1,654,818	-		PfGW456L13_1503	0.14	-0.1
1,654,818	-		PfGW456L13_1503	0.14	-0.4
1,654,818	-		PfGW456L13_1503	0.14	+0.1
1,654,818	-		PfGW456L13_1503	0.14	+1.6
1,654,818	-		PfGW456L13_1503	0.14	-1.0
1,654,853	+		PfGW456L13_1503	0.29	-0.6
1,654,853	+		PfGW456L13_1503	0.29	-0.0
1,654,853	+		PfGW456L13_1503	0.29	-1.4
1,654,853	+		PfGW456L13_1503	0.29	-1.2
1,654,854	-		PfGW456L13_1503	0.29	+1.1
1,654,854	-		PfGW456L13_1503	0.29	+0.6
1,654,854	-		PfGW456L13_1503	0.29	-0.4
1,654,854	-		PfGW456L13_1503	0.29	-0.4
1,654,854	-		PfGW456L13_1503	0.29	+2.3
1,654,854	-		PfGW456L13_1503	0.29	+1.2
1,654,854	-		PfGW456L13_1503	0.29	-0.5
1,654,854	-		PfGW456L13_1503	0.29	+1.0
1,654,854	-		PfGW456L13_1503	0.29	+1.0
1,654,871	-		PfGW456L13_1503	0.36	+1.5
1,654,943	+		PfGW456L13_1503	0.66	+0.6
1,654,944	-		PfGW456L13_1503	0.66	-0.9
1,654,944	-		PfGW456L13_1503	0.66	+0.1
1,655,110	+				+0.1
1,655,110	+				+0.3
1,655,110	+				+1.0
1,655,111	-				-1.9
1,655,111	-				+0.5
1,655,111	-				+0.1
1,655,114	+				+1.2
1,655,114	+				+0.5
1,655,114	+				-0.2
1,655,114	+				-1.1
1,655,114	+				-0.4
1,655,114	+				+0.6
1,655,114	+				+1.2
1,655,115	-				+2.1
1,655,115	-				-0.1
1,655,115	-				-1.4
1,655,115	-				+0.4
1,655,115	-				-0.6
1,655,115	-				+1.1
1,655,115	-				+0.2
1,655,121	+				-0.0
1,655,121	+				+0.1
1,655,146	+				+0.2
1,655,147	-				-1.1
1,655,147	-				+0.3
1,655,147	-				-0.1
1,655,147	-				-1.4
1,655,158	+				+0.2
1,655,159	-				+0.2
1,655,159	-				+0.9
1,655,159	-				+0.9
1,655,173	-				-0.9
1,655,173	-				+1.0
1,655,277	+		PfGW456L13_1504	0.14	+0.4
1,655,277	+		PfGW456L13_1504	0.14	-0.1
1,655,277	+		PfGW456L13_1504	0.14	+0.6
1,655,277	+		PfGW456L13_1504	0.14	+0.6
1,655,277	+		PfGW456L13_1504	0.14	+0.2
1,655,277	+		PfGW456L13_1504	0.14	+0.0
1,655,277	+		PfGW456L13_1504	0.14	+2.2
1,655,277	+		PfGW456L13_1504	0.14	+0.3
1,655,277	+		PfGW456L13_1504	0.14	-3.3
1,655,277	+		PfGW456L13_1504	0.14	-0.5
1,655,277	+		PfGW456L13_1504	0.14	+1.4
1,655,278	-		PfGW456L13_1504	0.14	-0.2
1,655,278	-		PfGW456L13_1504	0.14	-0.9
1,655,278	-		PfGW456L13_1504	0.14	+0.7
1,655,278	-		PfGW456L13_1504	0.14	+0.3
1,655,278	-		PfGW456L13_1504	0.14	-1.1
1,655,278	-		PfGW456L13_1504	0.14	-0.0
1,655,278	-		PfGW456L13_1504	0.14	+0.2
1,655,278	-		PfGW456L13_1504	0.14	-0.7
1,655,278	-		PfGW456L13_1504	0.14	+0.3
1,655,278	-		PfGW456L13_1504	0.14	+0.5
1,655,278	-		PfGW456L13_1504	0.14	+1.0
1,655,278	-		PfGW456L13_1504	0.14	+0.9
1,655,407	+		PfGW456L13_1504	0.28	+0.4
1,655,407	+		PfGW456L13_1504	0.28	+0.6
1,655,407	+		PfGW456L13_1504	0.28	+1.1
1,655,407	+		PfGW456L13_1504	0.28	+1.7
1,655,408	-		PfGW456L13_1504	0.28	+0.9
1,655,408	-		PfGW456L13_1504	0.28	+0.6
1,655,630	+		PfGW456L13_1504	0.52	-0.6
1,655,630	+		PfGW456L13_1504	0.52	-0.0
1,655,631	-		PfGW456L13_1504	0.52	+0.6
1,655,631	-		PfGW456L13_1504	0.52	-1.8
1,655,631	-		PfGW456L13_1504	0.52	-0.0
1,655,631	-		PfGW456L13_1504	0.52	-1.6
1,655,631	-		PfGW456L13_1504	0.52	+0.2
1,655,631	-		PfGW456L13_1504	0.52	+1.7
1,655,631	-		PfGW456L13_1504	0.52	-0.4
1,655,657	+		PfGW456L13_1504	0.55	-0.3
1,655,735	+		PfGW456L13_1504	0.63	-0.2
1,655,735	+		PfGW456L13_1504	0.63	-0.4
1,655,870	+		PfGW456L13_1504	0.77	+1.5
1,655,870	+		PfGW456L13_1504	0.77	-1.9
1,655,871	-		PfGW456L13_1504	0.78	+0.8
1,655,871	-		PfGW456L13_1504	0.78	+0.4
1,655,899	+		PfGW456L13_1504	0.81	-1.9
1,655,916	+		PfGW456L13_1504	0.82	+0.6
1,655,948	+		PfGW456L13_1504	0.86	-2.3
1,655,948	+		PfGW456L13_1504	0.86	+0.4
1,655,948	+		PfGW456L13_1504	0.86	-0.5
1,655,948	+		PfGW456L13_1504	0.86	+1.2
1,655,948	+		PfGW456L13_1504	0.86	+0.8
1,655,949	-		PfGW456L13_1504	0.86	-0.4
1,655,949	-		PfGW456L13_1504	0.86	-0.3
1,655,949	-		PfGW456L13_1504	0.86	+1.1
1,655,957	+		PfGW456L13_1504	0.87	+0.0
1,655,958	-		PfGW456L13_1504	0.87	+1.0
1,655,958	-		PfGW456L13_1504	0.87	-0.2
1,656,106	+				+1.0
1,656,106	+				-1.5
1,656,106	+				+0.2
1,656,107	-				-1.0
1,656,107	-				+0.6
1,656,107	-				+0.4
1,656,147	-				+0.4
1,656,205	+				-1.7
1,656,205	+				-1.4
1,656,205	+				+0.7
1,656,205	+				+0.8
1,656,205	+				+1.8
1,656,205	+				-1.5
1,656,205	+				-2.0
1,656,205	+				+0.6
1,656,205	+				-1.9
1,656,206	-				+0.6
1,656,206	-				-0.4
1,656,206	-				-0.8
1,656,206	-				+0.2
1,656,352	+		PfGW456L13_1505	0.29	+1.0
1,656,353	-		PfGW456L13_1505	0.29	+0.9
1,656,568	+		PfGW456L13_1505	0.60	-1.7
1,656,568	+		PfGW456L13_1505	0.60	-1.2
1,656,568	+		PfGW456L13_1505	0.60	+0.8
1,656,568	+		PfGW456L13_1505	0.60	-1.2
1,656,568	+		PfGW456L13_1505	0.60	-0.4
1,656,568	+		PfGW456L13_1505	0.60	-0.6
1,656,568	+		PfGW456L13_1505	0.60	-1.6
1,656,568	+		PfGW456L13_1505	0.60	+0.1
1,656,568	+		PfGW456L13_1505	0.60	-1.7
1,656,569	-		PfGW456L13_1505	0.61	-1.0
1,656,569	-		PfGW456L13_1505	0.61	-0.1
1,656,569	-		PfGW456L13_1505	0.61	+0.0
1,656,569	-		PfGW456L13_1505	0.61	-1.0
1,656,569	-		PfGW456L13_1505	0.61	-0.5
1,656,569	-		PfGW456L13_1505	0.61	+0.3
1,656,569	-		PfGW456L13_1505	0.61	+0.4
1,656,569	-		PfGW456L13_1505	0.61	+0.7
1,656,570	+		PfGW456L13_1505	0.61	-1.7
1,656,570	+		PfGW456L13_1505	0.61	-0.4
1,656,571	-		PfGW456L13_1505	0.61	+1.1
1,656,571	-		PfGW456L13_1505	0.61	+0.1
1,656,571	-		PfGW456L13_1505	0.61	-1.1
1,656,641	+		PfGW456L13_1505	0.71	-1.1
1,656,641	+		PfGW456L13_1505	0.71	+1.1
1,656,671	-		PfGW456L13_1505	0.75	-0.8
1,656,694	+		PfGW456L13_1505	0.79	-0.3
1,656,695	-		PfGW456L13_1505	0.79	-1.7
1,656,695	-		PfGW456L13_1505	0.79	-1.0
1,656,698	+		PfGW456L13_1505	0.79	+0.9
1,656,698	+		PfGW456L13_1505	0.79	+1.0
1,656,698	+		PfGW456L13_1505	0.79	-0.4
1,656,698	+		PfGW456L13_1505	0.79	-1.3
1,656,698	+		PfGW456L13_1505	0.79	-0.1
1,656,698	+		PfGW456L13_1505	0.79	-1.1
1,656,698	+		PfGW456L13_1505	0.79	-0.3
1,656,698	+		PfGW456L13_1505	0.79	-0.6
1,656,698	+		PfGW456L13_1505	0.79	-0.3
1,656,698	+		PfGW456L13_1505	0.79	-0.3
1,656,698	+		PfGW456L13_1505	0.79	+0.5
1,656,698	+		PfGW456L13_1505	0.79	+1.0
1,656,698	+		PfGW456L13_1505	0.79	+0.1
1,656,698	+		PfGW456L13_1505	0.79	-1.6
1,656,699	-		PfGW456L13_1505	0.79	+1.0
1,656,699	-		PfGW456L13_1505	0.79	-0.3
1,656,699	-		PfGW456L13_1505	0.79	-0.5
1,656,699	-		PfGW456L13_1505	0.79	-0.9
1,656,699	-		PfGW456L13_1505	0.79	-0.6
1,656,699	-		PfGW456L13_1505	0.79	+0.0
1,656,699	-		PfGW456L13_1505	0.79	-0.6
1,656,699	-		PfGW456L13_1505	0.79	-1.2
1,656,699	-		PfGW456L13_1505	0.79	+0.7
1,656,699	-		PfGW456L13_1505	0.79	-0.2
1,656,699	-		PfGW456L13_1505	0.79	-1.0
1,656,699	-		PfGW456L13_1505	0.79	+0.3
1,656,699	-		PfGW456L13_1505	0.79	-0.1
1,656,699	-		PfGW456L13_1505	0.79	+0.7
1,656,699	-		PfGW456L13_1505	0.79	+0.6
1,656,799	+				+0.3
1,656,799	+				+1.6
1,656,799	+				-0.7