Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1498

Experiment: D-Glucosamine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (C)
1,648,570	+		PfGW456L13_1496	0.47	-0.5
1,648,570	+		PfGW456L13_1496	0.47	-0.1
1,648,570	+		PfGW456L13_1496	0.47	+1.3
1,648,570	+		PfGW456L13_1496	0.47	-1.4
1,648,570	+		PfGW456L13_1496	0.47	-0.3
1,648,570	+		PfGW456L13_1496	0.47	+0.2
1,648,571	-		PfGW456L13_1496	0.47	-0.0
1,648,571	-		PfGW456L13_1496	0.47	+1.3
1,648,674	+		PfGW456L13_1496	0.55	+0.4
1,648,675	-		PfGW456L13_1496	0.55	+0.6
1,648,675	-		PfGW456L13_1496	0.55	-0.2
1,648,675	-		PfGW456L13_1496	0.55	-1.4
1,648,800	+		PfGW456L13_1496	0.64	-0.5
1,648,800	+		PfGW456L13_1496	0.64	-0.8
1,648,800	+		PfGW456L13_1496	0.64	+0.6
1,648,800	+		PfGW456L13_1496	0.64	+1.6
1,648,801	-		PfGW456L13_1496	0.64	+0.3
1,648,801	-		PfGW456L13_1496	0.64	+0.9
1,648,900	+		PfGW456L13_1496	0.72	+0.6
1,648,901	-		PfGW456L13_1496	0.72	-0.7
1,648,901	-		PfGW456L13_1496	0.72	+1.0
1,648,901	-		PfGW456L13_1496	0.72	+0.6
1,648,929	+		PfGW456L13_1496	0.74	-1.4
1,648,974	+		PfGW456L13_1496	0.78	-1.0
1,648,975	-		PfGW456L13_1496	0.78	+0.1
1,648,975	-		PfGW456L13_1496	0.78	-0.6
1,648,975	-		PfGW456L13_1496	0.78	+1.5
1,648,975	-		PfGW456L13_1496	0.78	-0.0
1,649,070	+		PfGW456L13_1496	0.85	+0.9
1,649,070	+		PfGW456L13_1496	0.85	+0.2
1,649,070	+		PfGW456L13_1496	0.85	-0.9
1,649,070	+		PfGW456L13_1496	0.85	+0.7
1,649,070	+		PfGW456L13_1496	0.85	-1.0
1,649,070	+		PfGW456L13_1496	0.85	-2.0
1,649,070	+		PfGW456L13_1496	0.85	+0.3
1,649,070	+		PfGW456L13_1496	0.85	+0.9
1,649,070	+		PfGW456L13_1496	0.85	-1.2
1,649,070	+		PfGW456L13_1496	0.85	+0.7
1,649,071	-		PfGW456L13_1496	0.85	+1.1
1,649,071	-		PfGW456L13_1496	0.85	+0.7
1,649,071	-		PfGW456L13_1496	0.85	-0.6
1,649,071	-		PfGW456L13_1496	0.85	-0.7
1,649,071	-		PfGW456L13_1496	0.85	-1.1
1,649,071	-		PfGW456L13_1496	0.85	-0.0
1,649,071	-		PfGW456L13_1496	0.85	+0.1
1,649,071	-		PfGW456L13_1496	0.85	-0.2
1,649,071	-		PfGW456L13_1496	0.85	+0.5
1,649,071	-		PfGW456L13_1496	0.85	+1.7
1,649,071	-		PfGW456L13_1496	0.85	-0.2
1,649,071	-		PfGW456L13_1496	0.85	+0.1
1,649,251	+				+0.8
1,649,251	+				-1.4
1,649,251	+				-0.1
1,649,251	+				-0.3
1,649,251	+				+0.6
1,649,251	+				+0.3
1,649,252	-				+2.0
1,649,252	-				-0.4
1,649,252	-				-1.4
1,649,252	-				-1.3
1,649,252	-				-1.7
1,649,252	-				+0.4
1,649,252	-				+1.3
1,649,269	+				-2.2
1,649,270	-				+0.4
1,649,283	-				-0.1
1,649,302	-				-0.1
1,649,302	-				+1.1
1,649,327	+				-1.3
1,649,327	+				-1.0
1,649,328	-				+0.4
1,649,337	+				+0.2
1,649,338	-				+0.6
1,649,344	+		PfGW456L13_1497	0.11	+0.9
1,649,344	+		PfGW456L13_1497	0.11	-1.1
1,649,344	+		PfGW456L13_1497	0.11	-0.1
1,649,385	-		PfGW456L13_1497	0.35	+1.1
1,649,390	+		PfGW456L13_1497	0.38	-0.6
1,649,390	+		PfGW456L13_1497	0.38	+1.0
1,649,390	+		PfGW456L13_1497	0.38	-1.2
1,649,390	+		PfGW456L13_1497	0.38	-1.2
1,649,390	+		PfGW456L13_1497	0.38	+0.2
1,649,390	+		PfGW456L13_1497	0.38	+1.3
1,649,391	-		PfGW456L13_1497	0.39	-0.5
1,649,391	-		PfGW456L13_1497	0.39	-0.2
1,649,391	-		PfGW456L13_1497	0.39	+1.7
1,649,391	-		PfGW456L13_1497	0.39	-1.4
1,649,452	-		PfGW456L13_1497	0.74	+0.1
1,649,452	-		PfGW456L13_1497	0.74	+0.8
1,649,516	+				+0.4
1,649,516	+				-0.7
1,649,517	-				+0.7
1,649,541	+				+0.6
1,649,541	+				+0.1
1,649,541	+				+1.8
1,649,542	-				+1.4
1,649,542	-				+1.6
1,649,542	-				-0.3
1,649,602	-				+1.3
1,649,636	-		PfGW456L13_1498	0.16	+0.4
1,649,636	-		PfGW456L13_1498	0.16	+1.2
1,649,903	-		PfGW456L13_1498	0.67	+2.5
1,650,028	+				-1.3
1,650,029	-				-0.2
1,650,029	-				+1.3
1,650,214	+		PfGW456L13_1499	0.22	+0.1
1,650,252	+		PfGW456L13_1499	0.28	-0.2
1,650,252	+		PfGW456L13_1499	0.28	-0.5
1,650,252	+		PfGW456L13_1499	0.28	-0.6
1,650,319	+		PfGW456L13_1499	0.39	-0.5
1,650,320	-		PfGW456L13_1499	0.39	-1.5
1,650,320	-		PfGW456L13_1499	0.39	-0.2
1,650,320	-		PfGW456L13_1499	0.39	-1.5
1,650,320	-		PfGW456L13_1499	0.39	-0.1
1,650,444	+		PfGW456L13_1499	0.59	+0.4
1,650,444	+		PfGW456L13_1499	0.59	-0.4
1,650,445	-		PfGW456L13_1499	0.59	+0.7
1,650,682	-				+0.1
1,650,682	-				-0.9
1,650,682	-				+0.3
1,650,682	-				-0.0
1,650,682	-				-0.5
1,650,682	-				-1.0
1,650,685	+				+0.1
1,650,685	+				-0.5
1,650,685	+				-1.2
1,650,685	+				+0.7
1,650,685	+				+1.0
1,650,685	+				+0.5
1,650,685	+				+0.6
1,650,686	-				-0.4
1,650,686	-				-0.0
1,650,686	-				-0.5
1,650,686	-				+1.0
1,650,701	+				-0.4
1,650,701	+				-2.0
1,650,701	+				+0.4
1,650,701	+				-2.0
1,650,702	-				+1.0
1,650,713	+				+0.5
1,650,714	-				+1.0
1,650,838	+				+1.2
1,650,839	-				-1.5
1,650,839	-				-1.7
1,650,851	+				+1.4
1,650,851	+				+0.6
1,650,851	+				-0.6
1,650,852	-				+1.5
1,650,871	+				+0.5
1,650,871	+				+0.1
1,650,871	+				+1.3
1,650,872	-				+0.4
1,650,872	-				-0.6
1,650,872	-				+1.1
1,650,872	-				+0.0
1,650,872	-				-0.4
1,650,913	+				+0.3
1,650,913	+				+0.0
1,650,913	+				-1.8
1,650,913	+				+1.1
1,650,913	+				-0.7
1,650,913	+				+0.4
1,650,913	+				+0.2
1,650,913	+				-1.5
1,650,913	+				-1.4
1,650,913	+				-2.0
1,650,913	+				+1.8
1,650,913	+				+0.1
1,650,913	+				+0.3
1,650,913	+				+0.8
1,650,913	+				+0.4
1,650,913	+				+0.6
1,650,914	-				-0.1
1,650,914	-				-1.9
1,650,914	-				-1.2
1,650,914	-				-0.4
1,650,914	-				+0.6
1,650,914	-				+1.1
1,650,914	-				+0.5
1,650,914	-				+0.3
1,650,914	-				-0.0
1,650,914	-				+1.4
1,650,914	-				+0.4
1,650,914	-				-0.0
1,650,914	-				-0.6
1,650,914	-				-0.0
1,650,915	+				-0.2
1,650,915	+				-2.1
1,650,915	+				-0.1
1,650,915	+				-0.4
1,650,915	+				+1.0
1,650,915	+				-0.6
1,650,915	+				-1.2
1,650,915	+				-0.3
1,650,915	+				-0.0
1,650,915	+				+0.3
1,650,915	+				-1.1
1,650,915	+				+0.5
1,650,915	+				-0.9
1,650,915	+				-0.5
1,650,915	+				-1.7
1,650,915	+				-0.5
1,650,915	+				+0.2
1,650,915	+				+2.0
1,650,915	+				-0.5
1,650,915	+				-1.2
1,650,915	+				+1.2
1,650,915	+				+1.4
1,650,915	+				+1.1
1,650,915	+				+0.6
1,650,915	+				-0.1
1,650,915	+				-0.3
1,650,915	+				+1.1
1,650,915	+				+0.2
1,650,915	+				-1.2
1,650,915	+				-0.7
1,650,916	-				-0.0
1,650,916	-				-0.0
1,650,916	-				+0.6
1,650,916	-				+1.0
1,650,916	-				+0.1
1,650,916	-				+1.7
1,650,916	-				+2.0
1,650,916	-				+1.3
1,650,916	-				+1.1
1,650,916	-				+0.8
1,650,916	-				+3.4
1,650,916	-				+1.2
1,650,916	-				+1.4
1,650,916	-				-0.3
1,650,916	-				+0.5
1,650,916	-				-1.0
1,650,916	-				-1.6
1,650,916	-				+1.1
1,650,916	-				+2.0
1,650,916	-				+1.5
1,650,916	-				+0.5
1,650,916	-				+0.9
1,650,916	-				+1.0
1,650,916	-				+1.2
1,650,916	-				-0.5
1,650,916	-				+1.1
1,650,916	-				-0.5
1,650,916	-				-0.4
1,650,916	-				-1.4
1,650,916	-				+0.1
1,650,916	-				+0.3
1,650,916	-				+1.0
1,650,916	-				-0.0
1,650,916	-				+0.6
1,650,916	-				-2.2
1,650,916	-				+0.2
1,650,916	-				+1.8
1,650,916	-				-0.0
1,650,916	-				+2.0
1,650,916	-				+0.9
1,650,916	-				-0.2
1,650,916	-				+1.7
1,650,916	-				-1.1
1,650,916	-				-0.6
1,650,916	-				-0.2
1,650,916	-				-0.2
1,650,916	-				+0.0
1,650,937	+				+1.1
1,650,937	+				-1.3
1,650,937	+				+2.4
1,650,937	+				+0.6
1,650,937	+				-0.1
1,650,937	+				+0.8
1,650,937	+				+0.9
1,650,937	+				-2.0
1,650,937	+				-0.1
1,650,937	+				-0.4
1,650,937	+				+0.7
1,650,937	+				-1.2
1,650,938	-				-0.9
1,650,938	-				-0.8
1,650,938	-				-0.0
1,650,938	-				-1.7
1,650,938	-				+1.6
1,650,938	-				-1.1
1,650,938	-				-0.1
1,650,938	-				-1.3
1,651,038	+				-1.8
1,651,039	-				+2.0