Strain Fitness in Pseudomonas sp. RS175 around PFR28_01996

Experiment: D-(+)-Galactosamine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-(+)-Galactosamine (C) 10 mM
2,264,323	-				-0.0
2,264,323	-				+2.4
2,264,323	-				-0.7
2,264,343	-				-0.7
2,264,456	+				+0.3
2,264,457	-				+0.5
2,264,472	-				-2.0
2,264,515	+				+0.2
2,264,516	-				-1.8
2,264,586	+		PFR28_01995	0.18	-1.7
2,264,586	+		PFR28_01995	0.18	+0.9
2,264,587	-		PFR28_01995	0.18	-3.0
2,264,730	+		PFR28_01995	0.38	+0.3
2,264,731	-		PFR28_01995	0.38	-1.1
2,264,782	+		PFR28_01995	0.45	-0.7
2,264,782	+		PFR28_01995	0.45	+1.4
2,264,782	+		PFR28_01995	0.45	-0.1
2,264,783	-		PFR28_01995	0.45	+1.2
2,264,783	-		PFR28_01995	0.45	+0.2
2,264,902	+		PFR28_01995	0.62	+0.7
2,264,902	+		PFR28_01995	0.62	-0.3
2,264,902	+		PFR28_01995	0.62	-0.4
2,264,902	+		PFR28_01995	0.62	-0.1
2,264,903	-		PFR28_01995	0.62	-0.1
2,264,903	-		PFR28_01995	0.62	-0.7
2,265,000	+		PFR28_01995	0.75	-0.3
2,265,000	+		PFR28_01995	0.75	-0.7
2,265,000	+		PFR28_01995	0.75	+0.7
2,265,000	+		PFR28_01995	0.75	+0.1
2,265,001	-		PFR28_01995	0.76	+0.2
2,265,001	-		PFR28_01995	0.76	-0.1
2,265,001	-		PFR28_01995	0.76	+1.4
2,265,001	-		PFR28_01995	0.76	-0.6
2,265,001	-		PFR28_01995	0.76	-0.0
2,265,066	+		PFR28_01995	0.85	+0.6
2,265,066	+		PFR28_01995	0.85	-1.2
2,265,067	-		PFR28_01995	0.85	-1.5
2,265,067	-		PFR28_01995	0.85	-0.2
2,265,067	-		PFR28_01995	0.85	-0.7
2,265,108	+				+0.6
2,265,108	+				+1.3
2,265,108	+				+0.4
2,265,108	+				+0.9
2,265,108	+				+0.3
2,265,108	+				-0.5
2,265,108	+				-1.9
2,265,109	-				-0.0
2,265,109	-				-0.5
2,265,109	-				+0.2
2,265,109	-				+0.6
2,265,109	-				-0.1
2,265,109	-				+0.8
2,265,109	-				-2.3
2,265,297	+				+0.1
2,265,297	+				-0.1
2,265,297	+				+0.2
2,265,298	-				+0.2
2,265,364	+				-0.3
2,265,365	-				+0.4
2,265,391	+				+1.7
2,265,392	-				-0.9
2,265,437	+				+1.0
2,265,807	-		PFR28_01996	0.14	-1.1
2,265,821	+		PFR28_01996	0.14	-0.1
2,265,844	-		PFR28_01996	0.15	-0.6
2,265,846	-		PFR28_01996	0.15	-0.1
2,266,016	+		PFR28_01996	0.19	-1.1
2,266,016	+		PFR28_01996	0.19	+0.7
2,266,278	-		PFR28_01996	0.25	-1.5
2,266,292	+		PFR28_01996	0.25	+1.0
2,266,293	-		PFR28_01996	0.25	-0.9
2,266,293	-		PFR28_01996	0.25	+1.7
2,266,293	-		PFR28_01996	0.25	+0.7
2,266,308	-		PFR28_01996	0.26	+1.2
2,266,308	-		PFR28_01996	0.26	+0.1
2,266,376	+		PFR28_01996	0.27	-1.8
2,266,376	+		PFR28_01996	0.27	-0.1
2,266,377	-		PFR28_01996	0.27	-1.0
2,266,377	-		PFR28_01996	0.27	-1.4
2,266,485	+		PFR28_01996	0.30	-0.5
2,266,541	+		PFR28_01996	0.31	+1.7
2,266,541	+		PFR28_01996	0.31	-1.3
2,266,542	-		PFR28_01996	0.31	+2.2
2,266,553	-		PFR28_01996	0.32	-0.7
2,266,609	+		PFR28_01996	0.33	-0.1
2,266,609	+		PFR28_01996	0.33	+1.7
2,266,610	-		PFR28_01996	0.33	+1.8
2,266,768	-		PFR28_01996	0.37	-0.0
2,266,855	+		PFR28_01996	0.39	-0.8
2,266,855	+		PFR28_01996	0.39	-0.3
2,266,856	-		PFR28_01996	0.39	-1.3
2,266,922	+		PFR28_01996	0.40	-1.4
2,266,923	-		PFR28_01996	0.40	-1.9
2,266,923	-		PFR28_01996	0.40	+1.0
2,266,923	-		PFR28_01996	0.40	+0.1
2,266,923	-		PFR28_01996	0.40	+0.6
2,267,263	+		PFR28_01996	0.49	+1.2
2,267,263	+		PFR28_01996	0.49	-1.8
2,267,264	-		PFR28_01996	0.49	+0.7
2,267,286	+		PFR28_01996	0.49	+1.7
2,267,385	-		PFR28_01996	0.52	-1.5
2,267,766	+		PFR28_01996	0.61	-1.1
2,267,767	-		PFR28_01996	0.61	-0.7
2,267,767	-		PFR28_01996	0.61	+0.2
2,267,846	+		PFR28_01996	0.63	-0.3
2,267,846	+		PFR28_01996	0.63	-0.3
2,267,847	-		PFR28_01996	0.63	-0.3
2,267,847	-		PFR28_01996	0.63	-0.6
2,267,949	+		PFR28_01996	0.65	-0.5
2,267,949	+		PFR28_01996	0.65	-2.2
2,267,949	+		PFR28_01996	0.65	-1.8
2,267,949	+		PFR28_01996	0.65	+0.9
2,267,950	-		PFR28_01996	0.65	-0.1
2,267,950	-		PFR28_01996	0.65	-0.9
2,267,967	+		PFR28_01996	0.66	+1.7
2,267,968	-		PFR28_01996	0.66	-2.2
2,268,010	+		PFR28_01996	0.67	-0.8
2,268,011	-		PFR28_01996	0.67	-0.8
2,268,143	+		PFR28_01996	0.70	+0.5
2,268,143	+		PFR28_01996	0.70	-0.6
2,268,144	-		PFR28_01996	0.70	-2.0
2,268,264	+		PFR28_01996	0.73	+1.0
2,268,265	-		PFR28_01996	0.73	+1.2
2,268,311	+		PFR28_01996	0.74	+0.6
2,268,322	-		PFR28_01996	0.74	-0.3
2,268,523	-		PFR28_01996	0.79	-0.9
2,268,523	-		PFR28_01996	0.79	+1.0
2,268,523	-		PFR28_01996	0.79	-1.2
2,268,597	+		PFR28_01996	0.81	+0.7
2,268,597	+		PFR28_01996	0.81	-0.8
2,268,597	+		PFR28_01996	0.81	-0.3
2,268,597	+		PFR28_01996	0.81	+0.8
2,268,597	+		PFR28_01996	0.81	+0.3
2,268,598	-		PFR28_01996	0.81	-1.1
2,268,869	+		PFR28_01996	0.87	-0.1
2,268,923	+		PFR28_01996	0.89	+0.0
2,268,923	+		PFR28_01996	0.89	-0.1
2,268,924	-		PFR28_01996	0.89	-0.5
2,268,934	+		PFR28_01996	0.89	+0.1
2,268,934	+		PFR28_01996	0.89	-0.3
2,268,934	+		PFR28_01996	0.89	-0.2
2,269,154	+				-0.3
2,269,155	-				+1.9
2,269,318	-				+0.6
2,269,414	+				-0.4
2,269,414	+				-3.3
2,269,414	+				+0.4
2,269,414	+				-0.3
2,269,414	+				-0.3
2,269,414	+				+0.2
2,269,414	+				-1.1
2,269,415	-				-1.8
2,269,415	-				+0.2
2,269,415	-				-0.5
2,269,457	+				+1.2
2,269,520	+				+1.9
2,269,521	-				-1.3
2,269,573	+				-0.8
2,269,649	+				+1.0
2,269,650	-				+0.5
2,269,650	-				+0.1
2,269,663	+				+0.7
2,269,663	+				+0.7
2,269,663	+				-0.1
2,269,663	+				+1.3
2,269,663	+				-0.3
2,269,663	+				+0.7
2,269,664	-				+0.8
2,269,664	-				+0.0
2,269,666	-				-1.0
2,269,849	+		PFR28_01997	0.20	-0.1
2,269,850	-		PFR28_01997	0.20	-0.0
2,269,893	+		PFR28_01997	0.29	-1.3
2,269,893	+		PFR28_01997	0.29	-2.5
2,269,893	+		PFR28_01997	0.29	-0.6
2,269,893	+		PFR28_01997	0.29	+0.1
2,269,893	+		PFR28_01997	0.29	-0.6
2,269,894	-		PFR28_01997	0.29	+1.5
2,269,894	-		PFR28_01997	0.29	-0.4
2,270,007	+		PFR28_01997	0.53	-0.3
2,270,008	-		PFR28_01997	0.54	+0.5
2,270,008	-		PFR28_01997	0.54	+1.6
2,270,198	+				+0.1
2,270,293	+				-1.1
2,270,293	+				+0.7
2,270,293	+				+0.0
2,270,293	+				+1.8
2,270,294	-				-0.5
2,270,294	-				+0.3
2,270,294	-				-1.1
2,270,294	-				+0.7
2,270,316	-				-0.7
2,270,337	+				+0.4
2,270,348	+				+0.8