Strain Fitness in Pseudomonas sp. RS175 around PFR28_00993

Experiment: D-(+)-Galactosamine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-(+)-Galactosamine (C) 10 mM
1,079,524	+		PFR28_00992	0.73	-0.4
1,079,525	-		PFR28_00992	0.73	+1.3
1,079,641	+		PFR28_00992	0.76	+0.8
1,079,641	+		PFR28_00992	0.76	-1.4
1,079,641	+		PFR28_00992	0.76	-0.2
1,079,642	-		PFR28_00992	0.76	+0.4
1,079,661	-		PFR28_00992	0.77	+1.0
1,079,661	-		PFR28_00992	0.77	+0.9
1,079,661	-		PFR28_00992	0.77	+3.0
1,079,661	-		PFR28_00992	0.77	-0.4
1,079,661	-		PFR28_00992	0.77	-0.9
1,079,661	-		PFR28_00992	0.77	-2.0
1,079,661	-		PFR28_00992	0.77	+2.1
1,079,852	+		PFR28_00992	0.82	+0.4
1,079,852	+		PFR28_00992	0.82	+0.9
1,079,852	+		PFR28_00992	0.82	-2.0
1,079,852	+		PFR28_00992	0.82	-0.2
1,079,852	+		PFR28_00992	0.82	-1.2
1,079,852	+		PFR28_00992	0.82	+0.4
1,079,852	+		PFR28_00992	0.82	-0.0
1,079,852	+		PFR28_00992	0.82	-0.6
1,079,853	-		PFR28_00992	0.82	+1.0
1,079,853	-		PFR28_00992	0.82	-0.8
1,079,853	-		PFR28_00992	0.82	+0.3
1,079,853	-		PFR28_00992	0.82	-0.8
1,079,853	-		PFR28_00992	0.82	+1.4
1,079,853	-		PFR28_00992	0.82	+0.1
1,079,911	+		PFR28_00992	0.84	+0.4
1,079,911	+		PFR28_00992	0.84	+0.1
1,079,911	+		PFR28_00992	0.84	-1.4
1,079,912	-		PFR28_00992	0.84	+0.3
1,079,912	-		PFR28_00992	0.84	+1.2
1,079,912	-		PFR28_00992	0.84	+0.5
1,079,925	-		PFR28_00992	0.84	-1.0
1,079,933	+		PFR28_00992	0.84	+1.4
1,079,933	+		PFR28_00992	0.84	+1.0
1,079,934	-		PFR28_00992	0.84	+2.0
1,079,934	-		PFR28_00992	0.84	-1.2
1,079,934	-		PFR28_00992	0.84	+1.2
1,079,934	-		PFR28_00992	0.84	+0.0
1,079,943	+		PFR28_00992	0.85	-1.5
1,079,943	+		PFR28_00992	0.85	-1.0
1,079,943	+		PFR28_00992	0.85	+1.1
1,079,944	-		PFR28_00992	0.85	+0.2
1,079,944	-		PFR28_00992	0.85	+0.9
1,079,957	+		PFR28_00992	0.85	-0.5
1,079,987	+		PFR28_00992	0.86	-0.8
1,079,987	+		PFR28_00992	0.86	+1.0
1,079,987	+		PFR28_00992	0.86	-1.1
1,079,987	+		PFR28_00992	0.86	+0.9
1,079,987	+		PFR28_00992	0.86	-1.9
1,079,987	+		PFR28_00992	0.86	-0.6
1,079,988	-		PFR28_00992	0.86	+0.0
1,079,988	-		PFR28_00992	0.86	-0.1
1,079,993	+		PFR28_00992	0.86	-1.1
1,079,993	+		PFR28_00992	0.86	-1.0
1,079,993	+		PFR28_00992	0.86	+0.0
1,079,994	-		PFR28_00992	0.86	-1.3
1,080,083	+		PFR28_00992	0.89	-3.2
1,080,083	+		PFR28_00992	0.89	-0.7
1,080,083	+		PFR28_00992	0.89	+1.9
1,080,083	+		PFR28_00992	0.89	-1.6
1,080,083	+		PFR28_00992	0.89	+0.4
1,080,083	+		PFR28_00992	0.89	-1.2
1,080,084	-		PFR28_00992	0.89	-0.4
1,080,084	-		PFR28_00992	0.89	-0.8
1,080,084	-		PFR28_00992	0.89	+0.4
1,080,084	-		PFR28_00992	0.89	-0.2
1,080,084	-		PFR28_00992	0.89	+0.4
1,080,084	-		PFR28_00992	0.89	+2.0
1,080,266	+				-1.9
1,080,267	-				+0.6
1,080,302	+				-0.4
1,080,416	+				+0.2
1,080,417	-				+1.6
1,080,417	-				-0.8
1,080,417	-				+0.7
1,080,417	-				+0.5
1,080,417	-				+0.7
1,080,417	-				-3.1
1,080,460	+				-1.2
1,080,460	+				+0.0
1,080,460	+				-0.5
1,080,460	+				-1.3
1,080,460	+				+0.7
1,080,461	-				-0.0
1,080,461	-				-0.3
1,080,461	-				-0.7
1,080,461	-				-0.4
1,080,461	-				-0.6
1,080,461	-				+0.5
1,080,461	-				+0.6
1,080,461	-				-0.0
1,080,461	-				-1.2
1,080,461	-				+1.0
1,080,475	+				+0.2
1,080,476	-				+1.2
1,080,549	+				+1.3
1,080,679	+		PFR28_00993	0.26	+0.9
1,080,777	-		PFR28_00993	0.41	+0.8
1,080,782	+		PFR28_00993	0.42	+2.2
1,080,782	+		PFR28_00993	0.42	+1.2
1,080,845	+		PFR28_00993	0.52	+1.5
1,080,846	-		PFR28_00993	0.52	-0.6
1,081,057	+		PFR28_00993	0.86	+1.7
1,081,068	-		PFR28_00993	0.88	+0.9
1,081,068	-		PFR28_00993	0.88	+0.4
1,081,068	-		PFR28_00993	0.88	-0.5
1,081,084	+				+1.0
1,081,084	+				-0.3
1,081,085	-				+0.5
1,081,171	-				-1.4
1,081,171	-				+0.9
1,081,184	+				-0.0
1,081,194	-				+1.6
1,081,231	+				-0.9
1,081,271	-				-0.3
1,081,278	-				+0.4
1,081,362	+				-0.6
1,081,362	+				-0.3
1,081,385	+				+1.1
1,081,388	+				-1.0
1,081,458	+				+0.7
1,081,458	+				-0.1
1,081,458	+				+0.3
1,081,458	+				+1.1
1,081,458	+				-0.5
1,081,459	-				-1.8
1,081,459	-				-1.4
1,081,459	-				-2.1
1,081,503	+				+1.2
1,081,503	+				-0.3
1,081,503	+				+1.2
1,081,504	-				-3.2
1,081,692	+		PFR28_00994	0.18	-0.5
1,081,692	+		PFR28_00994	0.18	+0.6
1,081,692	+		PFR28_00994	0.18	+0.1
1,081,692	+		PFR28_00994	0.18	+1.0
1,081,692	+		PFR28_00994	0.18	+0.7
1,081,693	-		PFR28_00994	0.18	-0.0
1,081,693	-		PFR28_00994	0.18	-0.4
1,081,693	-		PFR28_00994	0.18	-0.2
1,081,766	+		PFR28_00994	0.23	-3.1
1,081,792	+		PFR28_00994	0.25	-1.8
1,081,792	+		PFR28_00994	0.25	+2.1
1,081,792	+		PFR28_00994	0.25	-1.2
1,081,792	+		PFR28_00994	0.25	-1.2
1,081,792	+		PFR28_00994	0.25	-1.0
1,081,792	+		PFR28_00994	0.25	-1.2
1,081,792	+		PFR28_00994	0.25	-1.0
1,081,792	+		PFR28_00994	0.25	-0.4
1,081,792	+		PFR28_00994	0.25	+0.2
1,081,792	+		PFR28_00994	0.25	+0.6
1,081,792	+		PFR28_00994	0.25	-0.2
1,081,792	+		PFR28_00994	0.25	-0.1
1,081,792	+		PFR28_00994	0.25	-1.2
1,081,792	+		PFR28_00994	0.25	+1.0
1,081,792	+		PFR28_00994	0.25	-1.7
1,081,792	+		PFR28_00994	0.25	-1.0
1,081,792	+		PFR28_00994	0.25	+0.4
1,081,792	+		PFR28_00994	0.25	+0.3
1,081,792	+		PFR28_00994	0.25	+1.4
1,081,792	+		PFR28_00994	0.25	+0.4
1,081,792	+		PFR28_00994	0.25	-1.9
1,081,792	+		PFR28_00994	0.25	-0.9
1,081,792	+		PFR28_00994	0.25	+0.9
1,081,792	+		PFR28_00994	0.25	+0.0
1,081,792	+		PFR28_00994	0.25	+0.4
1,081,792	+		PFR28_00994	0.25	+0.2
1,081,792	+		PFR28_00994	0.25	+1.3
1,081,792	+		PFR28_00994	0.25	+0.7
1,081,792	+		PFR28_00994	0.25	-0.6
1,081,792	+		PFR28_00994	0.25	-1.5
1,081,792	+		PFR28_00994	0.25	+1.5
1,081,792	+		PFR28_00994	0.25	-0.1
1,081,792	+		PFR28_00994	0.25	-0.3
1,081,793	-		PFR28_00994	0.25	+0.8
1,081,793	-		PFR28_00994	0.25	+0.4
1,081,793	-		PFR28_00994	0.25	+0.0
1,081,793	-		PFR28_00994	0.25	-0.6
1,081,793	-		PFR28_00994	0.25	-0.3
1,081,793	-		PFR28_00994	0.25	-1.2
1,081,793	-		PFR28_00994	0.25	+0.2
1,081,793	-		PFR28_00994	0.25	-0.3
1,081,793	-		PFR28_00994	0.25	-0.3
1,081,793	-		PFR28_00994	0.25	+0.7
1,081,793	-		PFR28_00994	0.25	+0.8
1,081,793	-		PFR28_00994	0.25	-0.9
1,081,793	-		PFR28_00994	0.25	+0.7
1,081,793	-		PFR28_00994	0.25	+0.7
1,081,793	-		PFR28_00994	0.25	-0.7
1,081,793	-		PFR28_00994	0.25	-0.3
1,081,793	-		PFR28_00994	0.25	+0.4
1,081,793	-		PFR28_00994	0.25	-0.6
1,081,793	-		PFR28_00994	0.25	-0.4
1,081,793	-		PFR28_00994	0.25	+0.3
1,081,793	-		PFR28_00994	0.25	+0.5
1,081,793	-		PFR28_00994	0.25	+2.1
1,081,793	-		PFR28_00994	0.25	+1.7
1,081,793	-		PFR28_00994	0.25	-0.3
1,081,793	-		PFR28_00994	0.25	+0.7
1,081,793	-		PFR28_00994	0.25	-0.8
1,081,793	-		PFR28_00994	0.25	-1.6
1,081,793	-		PFR28_00994	0.25	+0.6
1,081,793	-		PFR28_00994	0.25	-0.4
1,081,793	-		PFR28_00994	0.25	+0.8
1,081,793	-		PFR28_00994	0.25	+1.3
1,081,947	+		PFR28_00994	0.37	+0.1
1,081,948	-		PFR28_00994	0.37	-1.7
1,081,948	-		PFR28_00994	0.37	+0.8
1,081,948	-		PFR28_00994	0.37	+1.1
1,082,005	-		PFR28_00994	0.41	+0.6
1,082,012	+		PFR28_00994	0.42	+0.1
1,082,012	+		PFR28_00994	0.42	-0.4
1,082,012	+		PFR28_00994	0.42	+0.3
1,082,012	+		PFR28_00994	0.42	-0.5
1,082,012	+		PFR28_00994	0.42	-0.0
1,082,012	+		PFR28_00994	0.42	-0.0
1,082,013	-		PFR28_00994	0.42	-0.0
1,082,013	-		PFR28_00994	0.42	+0.6
1,082,052	+		PFR28_00994	0.45	+0.5
1,082,052	+		PFR28_00994	0.45	+0.6
1,082,082	+		PFR28_00994	0.47	+1.0
1,082,083	-		PFR28_00994	0.47	-1.8