Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3812

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
4,552,698	+				+1.5
4,552,699	-				+0.7
4,552,716	+				+0.1
4,552,717	-				+1.1
4,552,717	-				-0.1
4,552,778	+				+0.3
4,552,778	+				+0.3
4,552,779	-				+0.2
4,552,779	-				-0.8
4,552,808	+				+0.9
4,552,809	-				+1.1
4,552,809	-				-0.8
4,552,809	-				+0.3
4,552,836	-				+1.5
4,552,876	-				+0.5
4,553,063	+				-0.2
4,553,064	-				-0.6
4,553,069	+				+0.5
4,553,105	-				-0.3
4,553,109	-				+1.2
4,553,118	+				-0.3
4,553,119	-				+0.3
4,553,123	-				-0.8
4,553,150	+				-2.1
4,553,151	-				+0.8
4,553,153	-				+0.3
4,553,188	-				+1.3
4,553,190	-				+0.2
4,553,237	-				-1.6
4,553,241	-				-1.1
4,553,275	+				+0.3
4,553,275	+				+0.1
4,553,290	+				+1.1
4,553,290	+				-0.5
4,553,295	+				+0.1
4,553,295	+				+1.3
4,553,296	-				-0.4
4,553,308	+		Echvi_3811	0.10	+0.2
4,553,308	+		Echvi_3811	0.10	-0.5
4,553,309	-		Echvi_3811	0.11	+0.4
4,553,311	-		Echvi_3811	0.11	+0.7
4,553,311	-		Echvi_3811	0.11	-0.8
4,553,312	+		Echvi_3811	0.11	-1.1
4,553,312	+		Echvi_3811	0.11	+1.2
4,553,314	+		Echvi_3811	0.12	+1.2
4,553,314	+		Echvi_3811	0.12	+0.4
4,553,315	-		Echvi_3811	0.12	+0.2
4,553,393	+		Echvi_3811	0.32	+2.7
4,553,393	+		Echvi_3811	0.32	+1.2
4,553,393	+		Echvi_3811	0.32	+1.0
4,553,393	+		Echvi_3811	0.32	-0.5
4,553,403	+		Echvi_3811	0.34	-0.1
4,553,403	+		Echvi_3811	0.34	-0.6
4,553,404	-		Echvi_3811	0.35	+1.1
4,553,415	+		Echvi_3811	0.37	+0.9
4,553,416	-		Echvi_3811	0.38	+0.9
4,553,461	+		Echvi_3811	0.49	-0.1
4,553,461	+		Echvi_3811	0.49	+1.6
4,553,462	-		Echvi_3811	0.49	+0.5
4,553,462	-		Echvi_3811	0.49	+0.5
4,553,462	-		Echvi_3811	0.49	+0.5
4,553,534	+		Echvi_3811	0.67	+0.5
4,553,534	+		Echvi_3811	0.67	-0.4
4,553,551	+		Echvi_3811	0.72	+0.7
4,553,551	+		Echvi_3811	0.72	-0.5
4,553,552	-		Echvi_3811	0.72	-0.8
4,553,552	-		Echvi_3811	0.72	-0.1
4,553,553	+		Echvi_3811	0.72	+0.2
4,553,554	-		Echvi_3811	0.72	-0.3
4,553,554	-		Echvi_3811	0.72	+0.5
4,553,554	-		Echvi_3811	0.72	+0.8
4,553,554	-		Echvi_3811	0.72	+0.9
4,553,554	-		Echvi_3811	0.72	-1.1
4,553,569	+		Echvi_3811	0.76	-1.5
4,553,586	-		Echvi_3811	0.81	+0.0
4,553,643	+				-0.7
4,553,670	+				-0.1
4,553,784	+				+0.5
4,553,784	+				+0.7
4,553,784	+				+0.3
4,553,785	-				-0.2
4,553,810	-				+0.1
4,553,888	-		Echvi_3812	0.13	-0.1
4,553,895	-		Echvi_3812	0.14	+1.1
4,553,923	+		Echvi_3812	0.15	-2.2
4,553,949	-		Echvi_3812	0.17	-0.5
4,553,949	-		Echvi_3812	0.17	+0.0
4,553,994	-		Echvi_3812	0.20	-0.4
4,554,029	+		Echvi_3812	0.22	-0.4
4,554,029	+		Echvi_3812	0.22	+0.0
4,554,029	+		Echvi_3812	0.22	+0.9
4,554,030	-		Echvi_3812	0.22	+2.5
4,554,030	-		Echvi_3812	0.22	+0.2
4,554,030	-		Echvi_3812	0.22	-0.1
4,554,030	-		Echvi_3812	0.22	+0.6
4,554,061	-		Echvi_3812	0.24	+0.0
4,554,109	-		Echvi_3812	0.27	+0.4
4,554,109	-		Echvi_3812	0.27	-0.3
4,554,219	+		Echvi_3812	0.33	+0.9
4,554,220	-		Echvi_3812	0.34	+0.8
4,554,220	-		Echvi_3812	0.34	+0.0
4,554,248	-		Echvi_3812	0.35	-0.7
4,554,292	+		Echvi_3812	0.38	+0.5
4,554,293	-		Echvi_3812	0.38	+1.8
4,554,293	-		Echvi_3812	0.38	-0.3
4,554,328	+		Echvi_3812	0.40	+0.9
4,554,385	+		Echvi_3812	0.44	+0.9
4,554,392	+		Echvi_3812	0.44	-0.4
4,554,392	+		Echvi_3812	0.44	+0.8
4,554,392	+		Echvi_3812	0.44	+0.5
4,554,393	-		Echvi_3812	0.44	+0.2
4,554,483	-		Echvi_3812	0.50	-0.0
4,554,542	+		Echvi_3812	0.53	+0.2
4,554,543	-		Echvi_3812	0.53	+0.5
4,554,543	-		Echvi_3812	0.53	+1.5
4,554,575	+		Echvi_3812	0.55	+0.5
4,554,592	-		Echvi_3812	0.56	+0.8
4,554,599	-		Echvi_3812	0.57	+0.0
4,554,600	+		Echvi_3812	0.57	+0.5
4,554,600	+		Echvi_3812	0.57	-0.6
4,554,601	-		Echvi_3812	0.57	+0.3
4,554,651	+		Echvi_3812	0.60	+1.7
4,554,651	+		Echvi_3812	0.60	+0.4
4,554,762	+		Echvi_3812	0.66	-1.8
4,554,762	+		Echvi_3812	0.66	-0.2
4,554,762	+		Echvi_3812	0.66	-0.7
4,554,762	+		Echvi_3812	0.66	-0.4
4,554,762	+		Echvi_3812	0.66	+0.9
4,554,826	+				-0.1
4,554,826	+		Echvi_3812	0.70	+0.5
4,554,913	+		Echvi_3812	0.76	+0.4
4,554,935	-		Echvi_3812	0.77	-0.1
4,554,935	-		Echvi_3812	0.77	-0.1
4,554,970	+		Echvi_3812	0.79	-0.1
4,554,971	-		Echvi_3812	0.79	-2.2
4,555,014	+		Echvi_3812	0.82	+1.2
4,555,018	-		Echvi_3812	0.82	+0.7
4,555,021	-		Echvi_3812	0.82	-0.9
4,555,021	-		Echvi_3812	0.82	+1.3
4,555,021	-		Echvi_3812	0.82	+0.1
4,555,108	+		Echvi_3812	0.88	-0.5
4,555,109	-		Echvi_3812	0.88	+0.9
4,555,109	-		Echvi_3812	0.88	-0.3
4,555,112	-		Echvi_3812	0.88	+0.2
4,555,186	+				+0.8
4,555,196	+				-0.6
4,555,196	+				+1.1
4,555,197	-				-0.1
4,555,205	+				+1.5
4,555,209	+				-1.4
4,555,262	+				-0.6
4,555,286	+				+0.2
4,555,340	-				-2.6
4,555,350	+				+0.5
4,555,371	+				+0.5
4,555,381	-				-0.4
4,555,386	-				-0.1
4,555,391	+				+0.9
4,555,392	-				-0.5
4,555,458	+				+0.5
4,555,458	+				+0.3
4,555,459	-				-0.3
4,555,459	-				+1.4
4,555,472	-				+0.1
4,555,566	+				+0.8
4,555,596	-				-1.1
4,555,596	-				+0.9
4,555,649	+		Echvi_3813	0.17	-1.9
4,555,649	+		Echvi_3813	0.17	-0.1
4,555,669	+		Echvi_3813	0.21	-0.0
4,555,670	-		Echvi_3813	0.21	-1.2
4,555,714	+		Echvi_3813	0.30	+2.1
4,555,760	-		Echvi_3813	0.40	-0.6
4,555,968	-		Echvi_3813	0.82	-2.5
4,556,024	+				+0.6
4,556,024	+				+0.5
4,556,080	+				+0.3
4,556,080	+				+0.9
4,556,081	-				+0.5
4,556,275	+		Echvi_3814	0.42	-1.6
4,556,275	+		Echvi_3814	0.42	-0.3
4,556,276	-		Echvi_3814	0.42	+0.6
4,556,276	-		Echvi_3814	0.42	+0.7
4,556,308	+		Echvi_3814	0.50	-0.2
4,556,309	-		Echvi_3814	0.50	+0.3