Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3808

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
4,544,812	-		Echvi_3807	0.22	-0.8
4,544,816	+		Echvi_3807	0.23	+0.6
4,544,821	+		Echvi_3807	0.23	+0.1
4,544,861	-		Echvi_3807	0.28	-0.0
4,544,893	+		Echvi_3807	0.31	+1.3
4,544,893	+		Echvi_3807	0.31	-0.5
4,544,894	-		Echvi_3807	0.31	-1.0
4,544,894	-		Echvi_3807	0.31	-0.3
4,544,894	-		Echvi_3807	0.31	+0.3
4,545,142	+		Echvi_3807	0.59	-0.5
4,545,142	+		Echvi_3807	0.59	-0.3
4,545,189	+		Echvi_3807	0.65	+0.1
4,545,281	+		Echvi_3807	0.75	-0.4
4,545,281	+		Echvi_3807	0.75	-0.8
4,545,281	+		Echvi_3807	0.75	+0.9
4,545,282	-		Echvi_3807	0.75	-0.2
4,545,298	+		Echvi_3807	0.77	-0.1
4,545,299	-		Echvi_3807	0.77	-1.8
4,545,357	+		Echvi_3807	0.84	-0.6
4,545,357	+		Echvi_3807	0.84	+0.3
4,545,399	-		Echvi_3807	0.88	-1.3
4,545,586	+				+0.5
4,545,587	-				+0.8
4,545,595	-				+0.0
4,545,637	+				+0.8
4,545,637	+				-0.9
4,545,638	-				-1.1
4,545,767	+				-0.3
4,545,768	-				+1.5
4,545,768	-				-0.0
4,545,773	-				+0.3
4,545,910	-				-1.3
4,545,955	+				-0.2
4,545,955	+				+0.5
4,545,955	+				+1.5
4,545,956	-				+1.2
4,545,956	-				-0.3
4,545,963	+				-0.6
4,545,963	+				-0.1
4,545,963	+				-1.1
4,545,984	-				+0.4
4,545,986	-				-0.5
4,545,986	-				-1.0
4,546,044	-		Echvi_3808	0.10	+0.8
4,546,056	+		Echvi_3808	0.11	-0.0
4,546,056	+		Echvi_3808	0.11	-0.3
4,546,163	-		Echvi_3808	0.15	+1.2
4,546,175	+		Echvi_3808	0.16	+0.3
4,546,267	+		Echvi_3808	0.20	+0.1
4,546,327	+		Echvi_3808	0.22	+0.1
4,546,327	+		Echvi_3808	0.22	+1.4
4,546,328	-		Echvi_3808	0.22	+0.2
4,546,328	-		Echvi_3808	0.22	+2.5
4,546,361	+		Echvi_3808	0.24	-1.3
4,546,454	+		Echvi_3808	0.28	+0.8
4,546,454	+		Echvi_3808	0.28	-0.4
4,546,466	-		Echvi_3808	0.28	-0.6
4,546,466	-		Echvi_3808	0.28	-1.0
4,546,542	-		Echvi_3808	0.32	+1.0
4,546,595	-		Echvi_3808	0.34	-1.5
4,546,625	+		Echvi_3808	0.35	+1.4
4,546,631	+		Echvi_3808	0.35	+1.5
4,546,631	+		Echvi_3808	0.35	+0.5
4,546,632	-		Echvi_3808	0.35	+0.0
4,546,633	+		Echvi_3808	0.35	+1.5
4,546,633	+		Echvi_3808	0.35	+0.5
4,546,633	+		Echvi_3808	0.35	+0.1
4,546,633	+		Echvi_3808	0.35	+0.6
4,546,633	+		Echvi_3808	0.35	-0.6
4,546,634	-		Echvi_3808	0.36	+0.4
4,546,634	-		Echvi_3808	0.36	+0.5
4,546,634	-		Echvi_3808	0.36	-0.4
4,546,638	+		Echvi_3808	0.36	+0.1
4,546,644	+		Echvi_3808	0.36	-1.0
4,546,644	+		Echvi_3808	0.36	+0.7
4,546,645	-		Echvi_3808	0.36	-0.8
4,546,651	-		Echvi_3808	0.36	+0.4
4,546,693	+		Echvi_3808	0.38	-1.5
4,546,694	-		Echvi_3808	0.38	+1.2
4,546,694	-		Echvi_3808	0.38	+1.9
4,546,715	-		Echvi_3808	0.39	+0.4
4,546,753	+		Echvi_3808	0.41	-0.3
4,546,753	+		Echvi_3808	0.41	-0.5
4,546,933	+		Echvi_3808	0.48	+0.1
4,546,933	+		Echvi_3808	0.48	+0.8
4,546,969	+		Echvi_3808	0.50	-0.4
4,546,981	-		Echvi_3808	0.50	-0.2
4,547,001	-		Echvi_3808	0.51	-0.2
4,547,187	-		Echvi_3808	0.59	-0.5
4,547,358	+		Echvi_3808	0.66	+1.2
4,547,359	-		Echvi_3808	0.66	-0.5
4,547,359	-		Echvi_3808	0.66	-0.0
4,547,363	-		Echvi_3808	0.67	+1.0
4,547,442	+		Echvi_3808	0.70	+0.1
4,547,480	+		Echvi_3808	0.72	-0.5
4,547,480	+		Echvi_3808	0.72	+2.1
4,547,523	-		Echvi_3808	0.73	+0.2
4,547,529	+		Echvi_3808	0.74	-0.2
4,547,530	-		Echvi_3808	0.74	-1.2
4,547,530	-		Echvi_3808	0.74	-1.2
4,547,544	-		Echvi_3808	0.74	+0.1
4,547,716	-		Echvi_3808	0.82	+1.1
4,547,745	+		Echvi_3808	0.83	-1.5
4,548,064	+				+2.0
4,548,064	+				+0.3
4,548,065	-				+0.2
4,548,072	+				+0.2
4,548,073	-				+0.1
4,548,203	+				+1.2
4,548,212	-				-1.0
4,548,213	+				-0.1
4,548,213	+				+0.7
4,548,213	+				-1.0
4,548,213	+				-0.2
4,548,213	+				+0.5
4,548,213	+				-0.1
4,548,214	-				-0.2
4,548,215	+				-0.1
4,548,215	+				-1.5
4,548,215	+				+1.0
4,548,215	+				-0.5
4,548,215	+				+0.3
4,548,215	+				-0.5
4,548,215	+				+1.1
4,548,215	+				-0.3
4,548,215	+				-1.6
4,548,216	-				-0.9
4,548,217	+				+0.9
4,548,217	+				-0.5
4,548,217	+				-0.1
4,548,217	+				+0.1
4,548,217	+				-0.9
4,548,244	+				+0.6
4,548,244	+				+0.1
4,548,247	+				+1.1
4,548,293	+				+0.5
4,548,294	-				-0.0
4,548,342	+				-0.9
4,548,343	-				+0.4
4,548,378	+				-0.3
4,548,396	-				-1.2
4,548,424	-				-0.2
4,548,451	+				+1.2
4,548,451	+				+0.8
4,548,451	+				-0.2
4,548,452	-				+0.4
4,548,452	-				+1.5
4,548,452	-				+0.7
4,548,452	-				-0.7
4,548,452	-				-2.0
4,548,602	+				-0.4
4,548,603	-				-0.3
4,548,603	-				+0.7
4,548,603	-				+0.4
4,548,603	-				+0.5
4,548,603	-				-0.6
4,548,604	+				-0.8
4,548,610	+				+1.1
4,548,610	+				+1.7
4,548,610	+				+0.1
4,548,614	-				-0.0
4,548,690	+				-0.2
4,548,768	-		Echvi_3809	0.13	-0.3
4,548,791	+		Echvi_3809	0.14	+0.0
4,548,791	+		Echvi_3809	0.14	-0.5
4,548,851	+		Echvi_3809	0.18	-0.0
4,548,851	+		Echvi_3809	0.18	-1.1
4,548,852	-		Echvi_3809	0.18	-0.0
4,548,852	-		Echvi_3809	0.18	+2.8
4,548,852	-		Echvi_3809	0.18	+1.0
4,548,932	-		Echvi_3809	0.22	-0.6
4,548,946	+		Echvi_3809	0.23	-1.2
4,548,947	-		Echvi_3809	0.23	-0.3
4,548,952	-		Echvi_3809	0.23	+0.9
4,548,952	-		Echvi_3809	0.23	+0.8
4,548,954	+		Echvi_3809	0.23	+0.1
4,548,973	+		Echvi_3809	0.24	+0.4
4,548,973	+		Echvi_3809	0.24	-0.7
4,548,973	+		Echvi_3809	0.24	-0.1
4,548,973	+		Echvi_3809	0.24	+0.3
4,548,974	-		Echvi_3809	0.24	+1.9
4,548,974	-		Echvi_3809	0.24	-0.7
4,548,974	-		Echvi_3809	0.24	-0.3
4,549,023	+		Echvi_3809	0.27	+0.1
4,549,026	+		Echvi_3809	0.27	-0.0
4,549,026	+		Echvi_3809	0.27	+0.2
4,549,026	+		Echvi_3809	0.27	-0.3
4,549,027	-		Echvi_3809	0.27	-0.4
4,549,107	+		Echvi_3809	0.31	-0.2
4,549,107	+		Echvi_3809	0.31	+1.1
4,549,108	-		Echvi_3809	0.31	-1.4
4,549,108	-		Echvi_3809	0.31	-0.3