Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3462

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
4,100,388	+		Echvi_3461	0.80	-0.1
4,100,388	+		Echvi_3461	0.80	-0.1
4,100,389	-		Echvi_3461	0.80	+1.0
4,100,389	-		Echvi_3461	0.80	+1.1
4,100,389	-		Echvi_3461	0.80	+1.1
4,100,392	+		Echvi_3461	0.80	-0.0
4,100,392	+		Echvi_3461	0.80	+1.1
4,100,392	+		Echvi_3461	0.80	-1.5
4,100,392	+		Echvi_3461	0.80	+1.8
4,100,392	+		Echvi_3461	0.80	-0.1
4,100,392	+		Echvi_3461	0.80	-0.8
4,100,392	+		Echvi_3461	0.80	+0.5
4,100,392	+		Echvi_3461	0.80	+0.7
4,100,392	+		Echvi_3461	0.80	-0.7
4,100,392	+		Echvi_3461	0.80	-1.5
4,100,393	-		Echvi_3461	0.80	-0.5
4,100,393	-		Echvi_3461	0.80	+0.5
4,100,393	-		Echvi_3461	0.80	+1.2
4,100,430	-		Echvi_3461	0.81	+0.9
4,100,467	-		Echvi_3461	0.82	+1.1
4,100,502	-		Echvi_3461	0.82	-0.1
4,100,502	-		Echvi_3461	0.82	+0.6
4,100,502	-		Echvi_3461	0.82	+0.2
4,100,529	+		Echvi_3461	0.83	+0.3
4,100,529	+		Echvi_3461	0.83	+0.1
4,100,529	+		Echvi_3461	0.83	+0.4
4,100,530	-		Echvi_3461	0.83	-0.6
4,100,530	-				+0.2
4,100,586	+		Echvi_3461	0.84	+1.3
4,100,586	+		Echvi_3461	0.84	-0.9
4,100,587	-		Echvi_3461	0.84	-0.5
4,100,591	+		Echvi_3461	0.85	-0.2
4,100,619	-		Echvi_3461	0.85	-0.1
4,100,619	-		Echvi_3461	0.85	+0.6
4,100,683	+		Echvi_3461	0.87	+0.7
4,100,684	-		Echvi_3461	0.87	+0.0
4,100,684	-		Echvi_3461	0.87	+0.1
4,100,684	-		Echvi_3461	0.87	+1.1
4,100,684	-		Echvi_3461	0.87	+1.2
4,100,718	+		Echvi_3461	0.87	+0.8
4,100,718	+		Echvi_3461	0.87	+0.9
4,100,718	+		Echvi_3461	0.87	+0.0
4,100,719	-		Echvi_3461	0.87	-0.5
4,100,841	+				-1.1
4,100,841	+				+2.5
4,100,841	+				+0.5
4,100,841	+				+0.1
4,100,841	+				-0.2
4,100,841	+				-0.6
4,100,842	-				+0.7
4,100,842	-				-0.5
4,100,842	-				-0.4
4,100,842	-				+2.0
4,100,843	+				-0.0
4,100,844	-				-0.9
4,100,847	+				+0.5
4,100,847	+				+0.5
4,100,848	-				+0.6
4,100,848	-				+1.7
4,100,848	-				+1.9
4,100,850	+				+0.1
4,100,850	+				+0.6
4,100,850	+				-0.5
4,100,851	-				+0.2
4,100,969	+				+0.5
4,100,970	-				-0.3
4,101,098	+				-0.9
4,101,098	+				-0.0
4,101,098	+				-0.4
4,101,112	+				+0.6
4,101,112	+				+0.3
4,101,119	+				+0.2
4,101,120	-				-0.1
4,101,129	-				+0.2
4,101,139	+				-1.1
4,101,140	-				+0.0
4,101,143	+				+1.3
4,101,143	+				-0.0
4,101,143	+				+0.4
4,101,167	-				-0.7
4,101,293	-				+0.7
4,101,295	+				-0.6
4,101,427	+				+0.2
4,101,450	+		Echvi_3462	0.12	-1.3
4,101,450	+		Echvi_3462	0.12	+0.8
4,101,489	+		Echvi_3462	0.18	+1.3
4,101,504	+		Echvi_3462	0.20	+0.2
4,101,550	+		Echvi_3462	0.28	+1.9
4,101,550	+		Echvi_3462	0.28	+0.0
4,101,550	+		Echvi_3462	0.28	-0.8
4,101,550	+		Echvi_3462	0.28	+0.3
4,101,550	+		Echvi_3462	0.28	-0.9
4,101,551	-		Echvi_3462	0.28	-0.7
4,101,551	-		Echvi_3462	0.28	+0.7
4,101,551	-		Echvi_3462	0.28	+1.3
4,101,557	+		Echvi_3462	0.29	-0.7
4,101,558	-		Echvi_3462	0.29	-0.1
4,101,569	-		Echvi_3462	0.31	+0.1
4,101,571	+		Echvi_3462	0.31	+0.8
4,101,572	-		Echvi_3462	0.32	+0.9
4,101,583	+		Echvi_3462	0.33	-1.3
4,101,584	-		Echvi_3462	0.33	+0.2
4,101,584	-		Echvi_3462	0.33	-0.4
4,101,584	-		Echvi_3462	0.33	-1.8
4,101,586	+		Echvi_3462	0.34	+0.6
4,101,613	+		Echvi_3462	0.38	-1.3
4,101,613	+		Echvi_3462	0.38	+0.2
4,101,617	-		Echvi_3462	0.39	-2.1
4,101,634	+		Echvi_3462	0.42	-0.3
4,101,643	+		Echvi_3462	0.43	-0.1
4,101,643	+		Echvi_3462	0.43	+0.5
4,101,734	+		Echvi_3462	0.58	-0.3
4,101,752	+		Echvi_3462	0.61	+0.4
4,101,753	-		Echvi_3462	0.61	+1.7
4,101,782	-		Echvi_3462	0.66	+0.2
4,101,805	-		Echvi_3462	0.69	-0.9
4,101,813	+		Echvi_3462	0.71	+0.4
4,101,818	+		Echvi_3462	0.72	+1.5
4,101,819	-		Echvi_3462	0.72	+0.7
4,101,819	-		Echvi_3462	0.72	-0.1
4,101,900	+		Echvi_3462	0.85	-2.3
4,101,900	+		Echvi_3462	0.85	-0.2
4,101,901	-		Echvi_3462	0.85	-1.8
4,101,924	+		Echvi_3462	0.89	+1.1
4,101,925	-		Echvi_3462	0.89	+0.6
4,101,925	-		Echvi_3462	0.89	-1.1
4,101,925	-		Echvi_3462	0.89	-1.1
4,102,006	+				+0.1
4,102,015	-				-0.3
4,102,015	-				+0.5
4,102,049	+				-0.2
4,102,049	+				-1.0
4,102,050	-				+0.5
4,102,050	-				-0.8
4,102,050	-				-1.7
4,102,050	-				+0.7
4,102,055	-				+1.5
4,102,063	-				+1.5
4,102,125	+		Echvi_3463	0.14	-1.9
4,102,185	+		Echvi_3463	0.25	-0.4
4,102,186	-		Echvi_3463	0.25	+0.4
4,102,201	-		Echvi_3463	0.28	-1.3
4,102,201	-		Echvi_3463	0.28	-1.0
4,102,202	+		Echvi_3463	0.28	+1.1
4,102,203	-		Echvi_3463	0.28	+0.9
4,102,203	-		Echvi_3463	0.28	-1.4
4,102,256	+		Echvi_3463	0.38	-0.2
4,102,256	+		Echvi_3463	0.38	-1.0
4,102,257	-		Echvi_3463	0.38	+0.3
4,102,257	-		Echvi_3463	0.38	-0.2
4,102,323	+		Echvi_3463	0.50	-0.2
4,102,458	-		Echvi_3463	0.75	-0.6
4,102,564	+				-0.9
4,102,565	-				+0.2
4,102,565	-				+0.4
4,102,569	+				-1.2
4,102,569	+				-1.0
4,102,569	+				+1.8
4,102,569	+				-1.1
4,102,570	-				+0.9
4,102,570	-				+0.7
4,102,570	-				-0.4
4,102,571	+				-0.4
4,102,571	+				+0.8
4,102,571	+				-0.5
4,102,571	+				+0.8
4,102,571	+				+0.3
4,102,571	+				+0.1
4,102,571	+				+0.5
4,102,572	-				-0.6
4,102,572	-				+1.2
4,102,572	-				-0.5
4,102,572	-				+0.5
4,102,572	-				+1.8
4,102,572	-				+1.5
4,102,572	-				+0.2
4,102,572	-				+0.8
4,102,572	-				+0.2
4,102,577	+				+0.5
4,102,578	-				-1.5
4,102,596	+				-0.2
4,102,597	-				+0.3
4,102,597	-				+1.0
4,102,638	+				+0.6
4,102,639	-				+0.0
4,102,683	-		Echvi_3464	0.12	+1.1
4,102,713	-		Echvi_3464	0.17	-1.1
4,102,782	-		Echvi_3464	0.28	+0.6
4,102,811	+		Echvi_3464	0.33	-0.4
4,102,811	+		Echvi_3464	0.33	-1.5
4,102,811	+		Echvi_3464	0.33	+2.3
4,102,811	+		Echvi_3464	0.33	+1.0
4,102,811	+		Echvi_3464	0.33	-0.2
4,102,811	+		Echvi_3464	0.33	-0.1
4,102,811	+		Echvi_3464	0.33	-0.6
4,102,812	-		Echvi_3464	0.33	-0.6
4,102,812	-		Echvi_3464	0.33	+0.2
4,102,812	-		Echvi_3464	0.33	+0.9
4,102,834	+		Echvi_3464	0.37	-0.0
4,102,834	+		Echvi_3464	0.37	-0.1
4,102,834	+		Echvi_3464	0.37	+1.1
4,102,835	-		Echvi_3464	0.37	+0.4
4,102,835	-		Echvi_3464	0.37	+0.7
4,102,835	-		Echvi_3464	0.37	-1.9
4,102,835	-		Echvi_3464	0.37	-1.7
4,102,835	-		Echvi_3464	0.37	-0.8
4,102,837	-		Echvi_3464	0.37	+0.1
4,102,838	+		Echvi_3464	0.37	-0.4
4,102,838	+		Echvi_3464	0.37	-0.6
4,102,838	+		Echvi_3464	0.37	-0.1
4,102,839	-		Echvi_3464	0.37	+0.0
4,102,846	-		Echvi_3464	0.39	+1.3
4,102,865	-		Echvi_3464	0.42	+1.1
4,102,865	-		Echvi_3464	0.42	+0.7
4,102,869	-		Echvi_3464	0.42	+0.0
4,102,872	-		Echvi_3464	0.43	-0.7
4,102,872	-		Echvi_3464	0.43	+0.9
4,102,872	-		Echvi_3464	0.43	-0.2
4,102,875	+		Echvi_3464	0.43	+0.3
4,102,875	+		Echvi_3464	0.43	+0.1
4,102,876	-		Echvi_3464	0.44	-0.4
4,102,876	-		Echvi_3464	0.44	-2.9
4,102,876	-		Echvi_3464	0.44	-0.5
4,102,901	-		Echvi_3464	0.48	-0.4
4,102,907	+		Echvi_3464	0.49	-0.1
4,102,907	+		Echvi_3464	0.49	+0.5
4,102,908	-		Echvi_3464	0.49	-0.8
4,102,908	-		Echvi_3464	0.49	-1.1
4,102,911	+		Echvi_3464	0.49	+0.4
4,102,911	+		Echvi_3464	0.49	+1.0
4,102,911	+		Echvi_3464	0.49	-1.3
4,102,913	+		Echvi_3464	0.50	-1.3
4,102,978	+		Echvi_3464	0.60	+2.4
4,102,978	+		Echvi_3464	0.60	+0.9
4,102,979	-		Echvi_3464	0.61	-0.0
4,102,988	+		Echvi_3464	0.62	+0.5
4,102,989	-		Echvi_3464	0.62	+0.5