Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2551

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
3,025,541	+				+0.9
3,025,560	+				+0.4
3,025,560	+				+0.0
3,025,560	+				-0.5
3,025,560	+				-0.3
3,025,662	+		Echvi_2550	0.58	+0.5
3,025,681	-		Echvi_2550	0.68	+0.6
3,025,681	-		Echvi_2550	0.68	-0.7
3,025,688	-		Echvi_2550	0.71	-0.7
3,025,709	+				+1.6
3,025,710	-		Echvi_2550	0.83	-1.2
3,025,807	+				-0.5
3,025,808	-				-1.5
3,025,810	+				-0.4
3,025,811	-				-1.6
3,025,819	-				+0.0
3,025,839	-				+0.5
3,025,842	-				+0.2
3,025,842	-				-0.7
3,025,870	-				+1.4
3,025,872	-				+0.5
3,025,872	-				-0.2
3,025,872	-				-0.8
3,025,892	+				+0.6
3,025,942	+				-0.3
3,025,985	+				-1.0
3,026,062	+				+0.1
3,026,062	+				-0.1
3,026,062	+				+0.3
3,026,063	-				-0.1
3,026,068	+				+0.1
3,026,151	+				-1.4
3,026,152	-				+0.0
3,026,295	+		Echvi_2551	0.15	+0.2
3,026,303	-		Echvi_2551	0.16	-0.3
3,026,347	-		Echvi_2551	0.18	-0.6
3,026,354	-		Echvi_2551	0.18	-0.1
3,026,370	+		Echvi_2551	0.19	-0.1
3,026,370	+		Echvi_2551	0.19	-0.5
3,026,371	-		Echvi_2551	0.19	-0.1
3,026,374	-		Echvi_2551	0.19	-0.8
3,026,415	-		Echvi_2551	0.21	+1.5
3,026,415	-		Echvi_2551	0.21	-0.6
3,026,470	+		Echvi_2551	0.23	+0.4
3,026,475	+		Echvi_2551	0.23	+0.2
3,026,476	-		Echvi_2551	0.23	+0.2
3,026,476	-		Echvi_2551	0.23	+2.0
3,026,476	-		Echvi_2551	0.23	-0.7
3,026,559	+		Echvi_2551	0.27	+0.7
3,026,559	+		Echvi_2551	0.27	+0.2
3,026,560	-		Echvi_2551	0.27	-0.5
3,026,689	-		Echvi_2551	0.33	-0.1
3,026,698	+		Echvi_2551	0.33	+0.9
3,026,698	+		Echvi_2551	0.33	-1.2
3,026,729	+		Echvi_2551	0.35	-1.1
3,026,730	-		Echvi_2551	0.35	+0.1
3,026,730	-		Echvi_2551	0.35	+0.1
3,026,730	-		Echvi_2551	0.35	-0.4
3,026,800	+		Echvi_2551	0.38	+0.5
3,026,860	+		Echvi_2551	0.40	-1.6
3,026,860	+		Echvi_2551	0.40	+0.0
3,026,863	-		Echvi_2551	0.41	-0.2
3,026,965	-		Echvi_2551	0.45	-1.1
3,026,979	-		Echvi_2551	0.46	-0.7
3,026,998	-		Echvi_2551	0.46	-0.0
3,027,012	+		Echvi_2551	0.47	-0.4
3,027,012	+		Echvi_2551	0.47	-0.7
3,027,022	-		Echvi_2551	0.48	+0.2
3,027,032	-		Echvi_2551	0.48	-0.9
3,027,097	-		Echvi_2551	0.51	-1.0
3,027,136	+		Echvi_2551	0.53	+0.6
3,027,186	-		Echvi_2551	0.55	-0.6
3,027,186	-		Echvi_2551	0.55	-0.4
3,027,189	-		Echvi_2551	0.55	-0.1
3,027,231	+		Echvi_2551	0.57	+0.5
3,027,232	-		Echvi_2551	0.57	+1.6
3,027,264	+		Echvi_2551	0.58	+1.0
3,027,264	+		Echvi_2551	0.58	+1.0
3,027,266	+		Echvi_2551	0.58	+0.9
3,027,266	+		Echvi_2551	0.58	+0.2
3,027,267	-		Echvi_2551	0.58	-1.6
3,027,267	-		Echvi_2551	0.58	+0.2
3,027,267	-		Echvi_2551	0.58	-0.7
3,027,399	+		Echvi_2551	0.64	-2.8
3,027,422	-		Echvi_2551	0.65	-0.3
3,027,548	-		Echvi_2551	0.71	+0.7
3,027,548	-		Echvi_2551	0.71	-0.6
3,027,575	-		Echvi_2551	0.72	+0.3
3,027,622	-		Echvi_2551	0.74	-2.1
3,027,641	-		Echvi_2551	0.75	-0.0
3,027,642	+		Echvi_2551	0.75	+0.2
3,027,663	+		Echvi_2551	0.76	-0.3
3,027,663	+		Echvi_2551	0.76	+0.3
3,027,663	+		Echvi_2551	0.76	-0.6
3,027,664	-		Echvi_2551	0.76	+1.4
3,027,664	-		Echvi_2551	0.76	-0.7
3,027,664	-		Echvi_2551	0.76	+0.5
3,027,664	-		Echvi_2551	0.76	-1.0
3,027,664	-		Echvi_2551	0.76	-0.7
3,027,705	+		Echvi_2551	0.78	-0.6
3,027,706	-		Echvi_2551	0.78	-0.2
3,027,706	-		Echvi_2551	0.78	-0.8
3,027,753	+		Echvi_2551	0.80	+0.6
3,027,753	+		Echvi_2551	0.80	-0.6
3,027,753	+		Echvi_2551	0.80	+0.2
3,027,754	-		Echvi_2551	0.80	-1.4
3,027,754	-		Echvi_2551	0.80	-1.2
3,027,754	-		Echvi_2551	0.80	-0.8
3,027,754	-		Echvi_2551	0.80	+0.2
3,027,766	+		Echvi_2551	0.80	-0.1
3,027,766	+		Echvi_2551	0.80	-1.0
3,027,792	+		Echvi_2551	0.82	-0.4
3,027,792	+		Echvi_2551	0.82	-0.4
3,027,818	+		Echvi_2551	0.83	-1.6
3,027,819	-		Echvi_2551	0.83	-1.2
3,027,819	-		Echvi_2551	0.83	+0.6
3,027,819	-		Echvi_2551	0.83	-0.5
3,027,819	-		Echvi_2551	0.83	-0.2
3,027,853	-		Echvi_2551	0.84	-0.1
3,027,853	-		Echvi_2551	0.84	+3.2
3,027,897	+		Echvi_2551	0.86	-1.0
3,027,897	+		Echvi_2551	0.86	-1.2
3,027,913	-		Echvi_2551	0.87	-0.9
3,027,916	-		Echvi_2551	0.87	-1.3
3,027,932	+		Echvi_2551	0.88	-1.5
3,027,932	+		Echvi_2551	0.88	-2.1
3,027,933	-		Echvi_2551	0.88	+0.6
3,027,938	-		Echvi_2551	0.88	-0.1
3,027,949	+		Echvi_2551	0.88	-1.0
3,027,949	+		Echvi_2551	0.88	-0.5
3,028,032	+				+1.5
3,028,032	+				+1.2
3,028,032	+				-1.2
3,028,049	-				-0.2
3,028,116	-				-1.1
3,028,129	+				+2.2
3,028,146	-				-1.7
3,028,231	-				-0.6
3,028,234	-				-0.1
3,028,258	+				+0.6
3,028,258	+				-0.0
3,028,259	-				+1.0
3,028,259	-				-0.9
3,028,259	-				-0.4
3,028,259	-				-0.5
3,028,259	-				+1.3
3,028,260	+				+0.6
3,028,260	+				-4.0
3,028,260	+				-0.2
3,028,260	+				+0.8
3,028,261	-				+1.6
3,028,261	-				+1.0
3,028,306	-				+0.7
3,028,315	-				-0.1
3,028,315	-				-0.3
3,028,315	-				-0.4
3,028,330	-				+0.2
3,028,333	-				+0.3
3,028,333	-				+0.3
3,028,333	-				+1.4
3,028,358	+				+0.6
3,028,361	+				-1.8
3,028,361	+				-1.2
3,028,451	-		Echvi_2552	0.14	-0.3
3,028,473	-		Echvi_2552	0.17	-0.0
3,028,521	-		Echvi_2552	0.25	+0.3
3,028,524	-		Echvi_2552	0.26	+0.5
3,028,524	-		Echvi_2552	0.26	-0.0
3,028,525	+		Echvi_2552	0.26	-0.7
3,028,529	-		Echvi_2552	0.26	-0.8
3,028,548	+		Echvi_2552	0.30	-1.2
3,028,548	+		Echvi_2552	0.30	-0.3
3,028,593	+		Echvi_2552	0.37	-0.6
3,028,602	+		Echvi_2552	0.38	-0.5
3,028,662	-		Echvi_2552	0.48	+1.0
3,028,663	+		Echvi_2552	0.48	-0.2
3,028,692	-		Echvi_2552	0.53	+0.4
3,028,692	-		Echvi_2552	0.53	-1.1
3,028,692	-		Echvi_2552	0.53	+1.6
3,028,694	+		Echvi_2552	0.54	+0.4
3,028,694	+		Echvi_2552	0.54	-0.3
3,028,694	+		Echvi_2552	0.54	+1.6
3,028,695	-		Echvi_2552	0.54	+0.9
3,028,695	-		Echvi_2552	0.54	-1.2
3,028,715	-		Echvi_2552	0.57	+0.9
3,028,715	-		Echvi_2552	0.57	-0.3
3,028,730	-		Echvi_2552	0.59	-0.3
3,028,736	-		Echvi_2552	0.60	-2.0
3,028,736	-		Echvi_2552	0.60	-0.6
3,028,737	+		Echvi_2552	0.61	-1.3
3,028,738	-		Echvi_2552	0.61	-1.4
3,028,822	+		Echvi_2552	0.75	-0.3
3,028,834	+		Echvi_2552	0.77	-0.8
3,028,842	-		Echvi_2552	0.78	-1.7
3,028,884	+		Echvi_2552	0.85	-0.4
3,028,885	-		Echvi_2552	0.85	-0.3
3,028,885	-		Echvi_2552	0.85	-0.1
3,028,948	-				-0.1
3,028,948	-				-0.2
3,028,948	-				-0.0
3,029,110	+				-0.5