Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1652

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
1,915,594	-		Echvi_1651	0.36	-0.1
1,915,748	-		Echvi_1651	0.46	-0.1
1,915,748	-				-0.5
1,915,748	-		Echvi_1651	0.46	-1.0
1,915,748	-		Echvi_1651	0.46	-0.3
1,915,811	-		Echvi_1651	0.50	-0.1
1,915,811	-		Echvi_1651	0.50	+0.1
1,915,875	+		Echvi_1651	0.55	+0.6
1,915,938	+		Echvi_1651	0.59	-2.2
1,915,938	+		Echvi_1651	0.59	-0.2
1,916,013	+		Echvi_1651	0.64	+0.5
1,916,022	-		Echvi_1651	0.65	-0.9
1,916,022	-		Echvi_1651	0.65	-1.2
1,916,029	-		Echvi_1651	0.65	+0.4
1,916,068	+		Echvi_1651	0.68	-0.5
1,916,113	+		Echvi_1651	0.71	-1.0
1,916,248	-		Echvi_1651	0.80	-0.9
1,916,412	+				+1.3
1,916,457	-				-1.9
1,916,469	+				-1.1
1,916,470	-				+0.6
1,916,470	-				+1.8
1,916,477	-				-0.1
1,916,484	+				-0.0
1,916,488	+				-1.4
1,916,488	+				+0.6
1,916,488	+				-0.3
1,916,488	+				+0.5
1,916,489	-				-0.1
1,916,508	+				-1.1
1,916,509	-				+0.7
1,916,536	+				+0.7
1,916,557	+				-1.3
1,916,582	+				-1.4
1,916,583	-				+1.1
1,916,586	+				-1.4
1,916,645	+				-0.9
1,916,645	+				-0.5
1,916,646	-				-1.0
1,916,697	+				+1.0
1,916,707	+				-0.2
1,916,736	+				+0.9
1,916,788	+		Echvi_1652	0.13	+0.5
1,916,788	+		Echvi_1652	0.13	+1.5
1,916,788	+		Echvi_1652	0.13	-1.4
1,916,789	-		Echvi_1652	0.13	-0.7
1,916,797	+		Echvi_1652	0.14	+0.0
1,916,798	-		Echvi_1652	0.14	+1.0
1,916,829	-		Echvi_1652	0.15	+0.1
1,916,829	-		Echvi_1652	0.15	-0.1
1,916,836	+		Echvi_1652	0.16	-1.5
1,916,836	+		Echvi_1652	0.16	+0.8
1,916,837	-		Echvi_1652	0.16	+0.6
1,916,840	+		Echvi_1652	0.16	-1.2
1,916,919	+		Echvi_1652	0.21	+0.6
1,916,920	-		Echvi_1652	0.21	-0.8
1,916,980	+		Echvi_1652	0.24	+0.2
1,916,980	+		Echvi_1652	0.24	-1.1
1,916,980	+		Echvi_1652	0.24	+0.6
1,916,980	+		Echvi_1652	0.24	+0.5
1,916,981	-		Echvi_1652	0.24	-0.3
1,917,020	-		Echvi_1652	0.27	+3.2
1,917,020	-		Echvi_1652	0.27	-0.5
1,917,060	+		Echvi_1652	0.29	+1.2
1,917,081	+		Echvi_1652	0.30	-0.7
1,917,193	+		Echvi_1652	0.37	-0.5
1,917,194	-		Echvi_1652	0.37	+0.3
1,917,275	-		Echvi_1652	0.42	-1.7
1,917,325	-		Echvi_1652	0.45	+1.7
1,917,351	-		Echvi_1652	0.46	-0.3
1,917,352	+		Echvi_1652	0.46	+2.2
1,917,361	+		Echvi_1652	0.47	+0.4
1,917,362	-		Echvi_1652	0.47	-3.4
1,917,440	+		Echvi_1652	0.51	-0.4
1,917,441	-		Echvi_1652	0.51	+3.4
1,917,441	-		Echvi_1652	0.51	-1.9
1,917,450	+		Echvi_1652	0.52	+0.5
1,917,471	-		Echvi_1652	0.53	-0.5
1,917,561	-		Echvi_1652	0.58	-0.2
1,917,563	+		Echvi_1652	0.59	-0.4
1,917,563	+		Echvi_1652	0.59	-0.7
1,917,564	-		Echvi_1652	0.59	+0.3
1,917,564	-		Echvi_1652	0.59	+1.5
1,917,688	+		Echvi_1652	0.66	+2.5
1,917,689	-		Echvi_1652	0.66	+0.7
1,917,690	+		Echvi_1652	0.66	+2.1
1,917,691	-		Echvi_1652	0.66	+0.7
1,917,691	-		Echvi_1652	0.66	-0.9
1,917,736	+		Echvi_1652	0.69	+0.3
1,917,736	+		Echvi_1652	0.69	+1.8
1,917,784	+		Echvi_1652	0.71	+1.5
1,917,785	-		Echvi_1652	0.72	+0.8
1,917,787	+		Echvi_1652	0.72	-0.0
1,917,787	+		Echvi_1652	0.72	+1.2
1,917,788	-		Echvi_1652	0.72	+1.8
1,917,788	-		Echvi_1652	0.72	-1.1
1,917,788	-		Echvi_1652	0.72	-0.9
1,917,788	-		Echvi_1652	0.72	-0.9
1,917,788	-		Echvi_1652	0.72	+1.1
1,917,858	+		Echvi_1652	0.76	-2.6
1,917,859	-		Echvi_1652	0.76	-1.4
1,917,877	+		Echvi_1652	0.77	+0.5
1,917,878	-		Echvi_1652	0.77	-0.8
1,917,884	+		Echvi_1652	0.77	+0.2
1,917,906	+		Echvi_1652	0.79	+1.1
1,917,906	+		Echvi_1652	0.79	+1.0
1,917,906	+		Echvi_1652	0.79	+2.5
1,917,906	+		Echvi_1652	0.79	-1.6
1,917,954	+		Echvi_1652	0.81	+0.0
1,918,043	-		Echvi_1652	0.87	-0.0
1,918,122	+				-0.5
1,918,123	-				-1.1
1,918,161	+				+0.1
1,918,161	+				+0.8
1,918,161	+				-0.7
1,918,161	+				+0.0
1,918,161	+				-0.7
1,918,195	-				+0.8
1,918,219	+				-0.6
1,918,253	-				+1.3
1,918,291	+				+1.6
1,918,292	-				-1.4
1,918,292	-				-0.0
1,918,321	-				-0.7
1,918,326	+				+0.1
1,918,343	+				+0.8
1,918,388	+				+0.3
1,918,512	+		Echvi_1653	0.15	+0.7
1,918,513	-		Echvi_1653	0.15	-1.4
1,918,574	+		Echvi_1653	0.19	+0.2
1,918,575	-		Echvi_1653	0.20	-0.2
1,918,586	-		Echvi_1653	0.20	-0.1
1,918,647	-		Echvi_1653	0.25	-1.0
1,918,652	+		Echvi_1653	0.25	+2.5
1,918,652	+		Echvi_1653	0.25	+0.1
1,918,652	+		Echvi_1653	0.25	-1.1
1,918,653	-		Echvi_1653	0.25	-0.1
1,918,653	-		Echvi_1653	0.25	+0.6
1,918,653	-		Echvi_1653	0.25	+1.6
1,918,687	+		Echvi_1653	0.28	-2.1
1,918,687	+		Echvi_1653	0.28	-0.1
1,918,688	-		Echvi_1653	0.28	+1.2
1,918,737	+		Echvi_1653	0.31	+1.1
1,918,737	+		Echvi_1653	0.31	-1.7
1,918,771	-		Echvi_1653	0.34	-0.3
1,918,771	-		Echvi_1653	0.34	+1.4
1,918,771	-		Echvi_1653	0.34	+1.0
1,918,772	+		Echvi_1653	0.34	+1.8
1,918,807	+		Echvi_1653	0.37	-0.7
1,918,857	-		Echvi_1653	0.40	-1.7
1,918,943	+		Echvi_1653	0.47	+1.0
1,918,943	+		Echvi_1653	0.47	+1.3
1,918,947	+		Echvi_1653	0.47	-0.5
1,918,947	+		Echvi_1653	0.47	-0.2
1,918,964	-		Echvi_1653	0.48	+1.8
1,918,978	-		Echvi_1653	0.49	-2.2
1,919,007	+		Echvi_1653	0.51	+0.8
1,919,013	-		Echvi_1653	0.52	+0.0
1,919,084	+		Echvi_1653	0.57	-1.1
1,919,094	+		Echvi_1653	0.58	+0.6
1,919,095	-		Echvi_1653	0.58	-0.3
1,919,095	-		Echvi_1653	0.58	-1.2
1,919,098	-		Echvi_1653	0.58	+1.4
1,919,214	+		Echvi_1653	0.66	+0.3
1,919,214	+		Echvi_1653	0.66	-0.9
1,919,215	-		Echvi_1653	0.66	-0.2
1,919,221	-		Echvi_1653	0.67	-1.4
1,919,222	+		Echvi_1653	0.67	-0.3
1,919,223	-		Echvi_1653	0.67	-0.1
1,919,266	-		Echvi_1653	0.70	-0.3
1,919,266	-		Echvi_1653	0.70	-0.2