Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1071

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
1,230,573	-		Echvi_1069	0.79	-0.9
1,230,622	-		Echvi_1069	0.81	+0.1
1,230,650	-		Echvi_1069	0.83	+0.2
1,230,774	+		Echvi_1069	0.88	-0.1
1,230,775	-		Echvi_1069	0.88	+1.3
1,230,775	-		Echvi_1069	0.88	+0.1
1,230,800	+				+0.7
1,230,871	-				+0.5
1,230,872	+				-2.1
1,230,873	-				-0.5
1,231,046	+				+1.1
1,231,099	+				+0.4
1,231,100	-				-0.0
1,231,120	-				-1.0
1,231,120	-				+0.7
1,231,128	+				-2.1
1,231,143	-				+0.2
1,231,184	-		Echvi_1070	0.17	-0.7
1,231,266	+		Echvi_1070	0.40	+0.9
1,231,266	+		Echvi_1070	0.40	-0.6
1,231,266	+		Echvi_1070	0.40	-0.7
1,231,267	-		Echvi_1070	0.41	+0.7
1,231,267	-		Echvi_1070	0.41	-1.1
1,231,267	-		Echvi_1070	0.41	+0.2
1,231,267	-		Echvi_1070	0.41	-0.1
1,231,342	+		Echvi_1070	0.62	-0.0
1,231,368	+		Echvi_1070	0.69	+0.1
1,231,425	-		Echvi_1070	0.85	+0.1
1,231,518	+				-0.3
1,231,519	-				+0.7
1,231,519	-				-1.3
1,231,521	+				-1.7
1,231,544	+				+0.1
1,231,544	+				-0.3
1,231,544	+				-0.5
1,231,544	+				+0.4
1,231,544	+				-0.6
1,231,544	+				+0.4
1,231,545	-				-2.9
1,231,545	-				+1.0
1,231,545	-				+0.2
1,231,545	-				+1.0
1,231,561	+				-2.2
1,231,561	+				+0.1
1,231,561	+				-1.7
1,231,562	-				+1.2
1,231,562	-				+1.0
1,231,562	-				+0.1
1,231,562	-				+0.6
1,231,562	-				+1.1
1,231,562	-				-0.3
1,231,627	-				+1.3
1,231,627	-				-0.5
1,231,783	+		Echvi_1071	0.21	-0.1
1,231,783	+		Echvi_1071	0.21	-1.2
1,231,915	+		Echvi_1071	0.32	+0.7
1,231,915	+		Echvi_1071	0.32	+0.3
1,231,915	+		Echvi_1071	0.32	-0.1
1,231,915	+		Echvi_1071	0.32	+0.7
1,231,916	-		Echvi_1071	0.32	-0.4
1,231,916	-		Echvi_1071	0.32	+1.0
1,231,962	-		Echvi_1071	0.36	+0.9
1,231,962	-		Echvi_1071	0.36	-1.3
1,232,004	-		Echvi_1071	0.40	-0.2
1,232,004	-		Echvi_1071	0.40	-0.4
1,232,107	-		Echvi_1071	0.49	-0.8
1,232,107	-		Echvi_1071	0.49	+0.2
1,232,233	+		Echvi_1071	0.59	+0.1
1,232,440	+		Echvi_1071	0.77	+0.0
1,232,533	+		Echvi_1071	0.85	+2.3
1,232,533	+		Echvi_1071	0.85	-0.0
1,232,578	-		Echvi_1071	0.89	+1.8
1,232,584	+		Echvi_1071	0.89	+0.6
1,232,584	+		Echvi_1071	0.89	-1.1
1,232,585	-		Echvi_1071	0.89	+1.0
1,232,642	+				+0.4
1,232,708	+				-0.5
1,232,708	+				-0.6
1,232,708	+				+0.7
1,232,709	-				+0.1
1,232,722	+				-0.3
1,232,725	+				-0.5
1,232,726	-				+0.4
1,232,760	+				+0.6
1,232,761	-				+0.8
1,232,780	-				+0.9
1,232,780	-				+0.2
1,232,780	-				+0.1
1,232,855	-				-0.4
1,232,866	-				-0.2
1,232,870	-				+0.0
1,232,871	+				+1.4
1,232,872	-				-1.3
1,232,885	+				+1.4
1,232,920	+		Echvi_1072	0.17	-0.2
1,232,920	+		Echvi_1072	0.17	+0.3
1,232,920	+		Echvi_1072	0.17	-1.1
1,232,934	+		Echvi_1072	0.21	+0.6
1,232,956	+		Echvi_1072	0.27	-0.9
1,232,956	+		Echvi_1072	0.27	-0.3
1,232,957	-		Echvi_1072	0.28	+1.4
1,232,957	-		Echvi_1072	0.28	+0.4
1,233,054	+		Echvi_1072	0.55	+0.4
1,233,055	-		Echvi_1072	0.56	-0.6
1,233,062	+		Echvi_1072	0.58	+0.3
1,233,062	+		Echvi_1072	0.58	+1.7
1,233,062	+		Echvi_1072	0.58	-0.6
1,233,062	+		Echvi_1072	0.58	-0.3
1,233,062	+		Echvi_1072	0.58	+1.2
1,233,062	+		Echvi_1072	0.58	-0.3
1,233,062	+		Echvi_1072	0.58	-0.0
1,233,062	+		Echvi_1072	0.58	+0.7
1,233,062	+		Echvi_1072	0.58	-0.2
1,233,062	+		Echvi_1072	0.58	-1.2
1,233,062	+		Echvi_1072	0.58	-1.2
1,233,063	-		Echvi_1072	0.58	-0.4
1,233,063	-		Echvi_1072	0.58	-0.6
1,233,063	-		Echvi_1072	0.58	+0.3
1,233,063	-		Echvi_1072	0.58	-1.5
1,233,063	-		Echvi_1072	0.58	+0.0
1,233,063	-		Echvi_1072	0.58	-1.0
1,233,063	-		Echvi_1072	0.58	+0.6
1,233,063	-		Echvi_1072	0.58	-0.8
1,233,067	+		Echvi_1072	0.59	+0.6
1,233,068	-		Echvi_1072	0.59	-0.7
1,233,090	+		Echvi_1072	0.66	-1.0
1,233,090	+		Echvi_1072	0.66	+0.3
1,233,090	+		Echvi_1072	0.66	+0.3
1,233,098	+		Echvi_1072	0.68	-0.8
1,233,098	+		Echvi_1072	0.68	+1.0
1,233,098	+		Echvi_1072	0.68	-1.2
1,233,098	+		Echvi_1072	0.68	+0.9
1,233,098	+		Echvi_1072	0.68	-1.0
1,233,099	-		Echvi_1072	0.68	-1.4
1,233,099	-		Echvi_1072	0.68	+0.4
1,233,099	-		Echvi_1072	0.68	-0.0
1,233,099	-		Echvi_1072	0.68	-0.6
1,233,099	-		Echvi_1072	0.68	+0.8
1,233,099	-		Echvi_1072	0.68	-0.6
1,233,099	-		Echvi_1072	0.68	-0.0
1,233,102	+		Echvi_1072	0.69	-0.1
1,233,123	-		Echvi_1072	0.75	-2.1
1,233,184	+				-0.2
1,233,185	-				+0.5
1,233,185	-				+2.0
1,233,185	-				-0.2
1,233,208	+				-0.6
1,233,208	+				+1.4
1,233,221	+				+1.2
1,233,221	+				-0.1
1,233,221	+				+0.2
1,233,222	-				+0.6
1,233,226	+				-2.8
1,233,226	+				-0.3
1,233,226	+				+2.0
1,233,227	-				+0.4
1,233,227	-				-1.1
1,233,227	-				-0.8
1,233,229	+				-1.9
1,233,246	+				-0.9
1,233,250	+				-0.3
1,233,250	+				+0.8
1,233,251	-				+0.8
1,233,287	+				+1.8
1,233,287	+				+0.5
1,233,398	+				-0.8
1,233,440	+				+0.4
1,233,440	+				+0.9
1,233,496	+		Echvi_1073	0.13	+0.4
1,233,496	+		Echvi_1073	0.13	-0.8
1,233,497	-		Echvi_1073	0.13	-1.3
1,233,497	-		Echvi_1073	0.13	+0.2
1,233,522	+		Echvi_1073	0.14	+0.1
1,233,604	-		Echvi_1073	0.19	+0.2
1,233,604	-		Echvi_1073	0.19	-0.8
1,233,615	-		Echvi_1073	0.19	+1.7
1,233,643	-		Echvi_1073	0.21	-0.5
1,233,643	-		Echvi_1073	0.21	-0.1
1,233,645	+		Echvi_1073	0.21	-0.4
1,233,646	-		Echvi_1073	0.21	-0.3
1,233,672	+		Echvi_1073	0.22	-0.8