Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0880

Experiment: D-Raffinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose (C)
1,006,016	-		Echvi_0879	0.57	+1.2
1,006,137	+		Echvi_0879	0.63	+0.0
1,006,137	+		Echvi_0879	0.63	-0.8
1,006,137	+		Echvi_0879	0.63	-0.1
1,006,225	+		Echvi_0879	0.68	+0.6
1,006,225	+		Echvi_0879	0.68	+1.4
1,006,226	-		Echvi_0879	0.68	+0.9
1,006,279	+		Echvi_0879	0.71	-1.9
1,006,280	-		Echvi_0879	0.71	+0.9
1,006,379	+		Echvi_0879	0.77	-0.2
1,006,402	+		Echvi_0879	0.78	+0.2
1,006,403	-		Echvi_0879	0.78	+0.4
1,006,554	-		Echvi_0879	0.86	+0.1
1,006,573	+		Echvi_0879	0.87	-0.6
1,006,625	+				-0.1
1,006,635	-				+0.5
1,006,646	+				+0.2
1,006,646	+				-0.5
1,006,650	+				+1.4
1,006,650	+				+2.4
1,006,651	-				+0.4
1,006,651	-				-0.2
1,006,802	-				-1.5
1,006,802	-				+0.0
1,006,830	+				+1.4
1,006,831	-				-0.2
1,006,831	-				-0.8
1,006,831	-				-0.1
1,006,849	+				+0.7
1,006,849	+				-1.1
1,006,874	-				-0.5
1,006,874	-				+1.0
1,006,974	+		Echvi_0880	0.12	+1.9
1,006,974	+		Echvi_0880	0.12	+0.7
1,006,974	+		Echvi_0880	0.12	-1.0
1,006,975	-		Echvi_0880	0.12	+0.8
1,006,975	-		Echvi_0880	0.12	-0.1
1,006,975	-		Echvi_0880	0.12	-1.4
1,006,975	-		Echvi_0880	0.12	+0.6
1,007,009	-		Echvi_0880	0.15	+0.7
1,007,009	-		Echvi_0880	0.15	-0.2
1,007,035	-		Echvi_0880	0.17	-1.5
1,007,035	-		Echvi_0880	0.17	-0.3
1,007,068	+		Echvi_0880	0.20	-0.9
1,007,105	-		Echvi_0880	0.24	+0.2
1,007,105	-		Echvi_0880	0.24	+0.6
1,007,236	+		Echvi_0880	0.36	-0.3
1,007,272	-		Echvi_0880	0.39	+0.7
1,007,272	-		Echvi_0880	0.39	-0.4
1,007,297	-		Echvi_0880	0.42	+1.1
1,007,300	+		Echvi_0880	0.42	-0.1
1,007,331	-		Echvi_0880	0.45	-1.0
1,007,338	+		Echvi_0880	0.45	-1.1
1,007,339	-		Echvi_0880	0.45	-0.8
1,007,341	+		Echvi_0880	0.46	+0.4
1,007,341	+		Echvi_0880	0.46	-1.5
1,007,341	+		Echvi_0880	0.46	-0.1
1,007,341	+		Echvi_0880	0.46	-0.6
1,007,342	-		Echvi_0880	0.46	-0.3
1,007,342	-		Echvi_0880	0.46	-0.7
1,007,343	+		Echvi_0880	0.46	-0.1
1,007,343	+		Echvi_0880	0.46	-1.3
1,007,344	-		Echvi_0880	0.46	-0.5
1,007,344	-		Echvi_0880	0.46	-0.6
1,007,344	-		Echvi_0880	0.46	+0.2
1,007,344	-		Echvi_0880	0.46	+0.4
1,007,344	-		Echvi_0880	0.46	+0.9
1,007,374	-		Echvi_0880	0.49	-0.9
1,007,412	+		Echvi_0880	0.52	+0.1
1,007,412	+		Echvi_0880	0.52	-0.8
1,007,412	+		Echvi_0880	0.52	-0.4
1,007,413	-		Echvi_0880	0.52	+0.4
1,007,413	-		Echvi_0880	0.52	+1.7
1,007,413	-		Echvi_0880	0.52	+0.1
1,007,413	-		Echvi_0880	0.52	-0.0
1,007,413	-		Echvi_0880	0.52	+0.3
1,007,438	-		Echvi_0880	0.55	-0.5
1,007,450	+		Echvi_0880	0.56	+0.2
1,007,450	+		Echvi_0880	0.56	+0.8
1,007,452	+		Echvi_0880	0.56	-0.9
1,007,452	+		Echvi_0880	0.56	-0.4
1,007,452	+		Echvi_0880	0.56	-1.5
1,007,452	+		Echvi_0880	0.56	+1.1
1,007,453	-		Echvi_0880	0.56	-1.4
1,007,456	+		Echvi_0880	0.56	+0.4
1,007,456	+		Echvi_0880	0.56	-1.5
1,007,457	-		Echvi_0880	0.56	-0.5
1,007,457	-		Echvi_0880	0.56	-0.0
1,007,457	-		Echvi_0880	0.56	-1.2
1,007,457	-		Echvi_0880	0.56	-0.6
1,007,467	+		Echvi_0880	0.57	-1.3
1,007,468	-		Echvi_0880	0.57	-0.3
1,007,630	-		Echvi_0880	0.72	-0.4
1,007,630	-		Echvi_0880	0.72	-1.8
1,007,630	-		Echvi_0880	0.72	-0.9
1,007,656	+				+0.9
1,007,657	-		Echvi_0880	0.75	-0.5
1,007,674	+		Echvi_0880	0.76	-1.2
1,007,674	+		Echvi_0880	0.76	-0.1
1,007,674	+		Echvi_0880	0.76	+0.5
1,007,674	+		Echvi_0880	0.76	+0.3
1,007,675	-		Echvi_0880	0.77	-1.2
1,007,675	-		Echvi_0880	0.77	+0.8
1,007,675	-		Echvi_0880	0.77	-0.3
1,007,714	+		Echvi_0880	0.80	-0.8
1,007,715	-		Echvi_0880	0.80	+0.6
1,007,732	+		Echvi_0880	0.82	+1.4
1,007,732	+		Echvi_0880	0.82	-0.2
1,007,733	-		Echvi_0880	0.82	+0.3
1,007,734	+		Echvi_0880	0.82	-0.2
1,007,734	+		Echvi_0880	0.82	+1.9
1,007,734	+		Echvi_0880	0.82	-0.4
1,007,735	-		Echvi_0880	0.82	+0.9
1,007,735	-		Echvi_0880	0.82	-0.1
1,007,762	+		Echvi_0880	0.85	+0.9
1,007,763	-		Echvi_0880	0.85	-1.1
1,007,852	+				-0.4
1,007,856	-				+0.4
1,007,894	+				-0.9
1,007,898	-				-0.2
1,007,928	-				+0.8
1,007,957	-				-0.7
1,007,962	+				+0.0
1,007,962	+				-0.0
1,007,962	+				-0.7
1,007,963	-				+0.1
1,007,963	-				+0.0
1,007,963	-				-0.4
1,007,964	+				-0.3
1,007,965	-				-0.4
1,007,965	-				+1.7
1,007,965	-				-1.8
1,007,965	-				+0.4
1,007,967	+				-1.2
1,007,967	+				-0.3
1,007,968	-				+0.6
1,007,971	-				+0.1
1,008,015	+				-0.2
1,008,015	+				-0.6
1,008,016	-				-0.1
1,008,042	+				+0.3
1,008,044	+				-1.1
1,008,081	+				+0.4
1,008,081	+				+0.7
1,008,081	+				-0.6
1,008,091	+				-0.8
1,008,091	+				-0.1
1,008,092	-				-0.6
1,008,092	-				-2.5
1,008,106	+				+0.4
1,008,107	-				-0.1
1,008,107	-				-0.0
1,008,137	+				+0.6
1,008,171	+				+0.2
1,008,171	+				-0.6
1,008,292	-		Echvi_0881	0.12	-0.8
1,008,311	-		Echvi_0881	0.13	-1.1
1,008,313	+		Echvi_0881	0.13	+0.4
1,008,369	+		Echvi_0881	0.15	-0.0
1,008,369	+		Echvi_0881	0.15	-0.4
1,008,370	-		Echvi_0881	0.15	+1.6
1,008,371	+		Echvi_0881	0.15	-1.4
1,008,371	+		Echvi_0881	0.15	-0.1
1,008,372	-		Echvi_0881	0.15	-0.1
1,008,372	-		Echvi_0881	0.15	+0.1
1,008,408	+		Echvi_0881	0.16	-0.4
1,008,426	+		Echvi_0881	0.17	+0.6
1,008,427	-		Echvi_0881	0.17	+0.5
1,008,539	+		Echvi_0881	0.22	+0.6
1,008,539	+		Echvi_0881	0.22	-1.0
1,008,540	-		Echvi_0881	0.22	-0.1
1,008,595	-		Echvi_0881	0.24	+0.3
1,008,713	-		Echvi_0881	0.29	-0.0
1,008,778	-		Echvi_0881	0.31	-0.4
1,008,787	+		Echvi_0881	0.31	-1.6
1,008,787	+		Echvi_0881	0.31	+0.4
1,008,788	-		Echvi_0881	0.32	-0.4
1,008,790	-		Echvi_0881	0.32	+0.4
1,008,814	+		Echvi_0881	0.33	-1.1
1,008,861	+		Echvi_0881	0.34	-1.5
1,008,862	-		Echvi_0881	0.34	-1.5
1,008,876	+		Echvi_0881	0.35	+0.1
1,008,876	+		Echvi_0881	0.35	-0.2
1,008,877	-		Echvi_0881	0.35	-0.6
1,008,893	-		Echvi_0881	0.36	-0.5