Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21285 and CA264_21290 are separated by 12 nucleotides CA264_21290 and CA264_21295 are separated by 23 nucleotides CA264_21295 and CA264_21300 are separated by 13 nucleotides CA264_21300 and CA264_21305 are separated by 130 nucleotides
CA264_21285: CA264_21285 - hypothetical protein, at 123,297 to 123,764
_21285
CA264_21290: CA264_21290 - SCO family protein, at 123,777 to 124,433
_21290
CA264_21295: CA264_21295 - hypothetical protein, at 124,457 to 124,855
_21295
CA264_21300: CA264_21300 - hypothetical protein, at 124,869 to 125,432
_21300
CA264_21305: CA264_21305 - hypothetical protein, at 125,563 to 125,895
_21305
Position (kb)
124
125 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 123.491 kb on - strand, within CA264_21285 at 123.759 kb on - strand at 123.804 kb on + strand at 123.923 kb on + strand, within CA264_21290 at 123.923 kb on + strand, within CA264_21290 at 124.069 kb on - strand, within CA264_21290 at 124.077 kb on + strand, within CA264_21290 at 124.077 kb on + strand, within CA264_21290 at 124.077 kb on + strand, within CA264_21290 at 124.078 kb on - strand, within CA264_21290 at 124.144 kb on + strand, within CA264_21290 at 124.313 kb on - strand, within CA264_21290 at 124.431 kb on + strand at 124.449 kb on + strand at 124.450 kb on - strand at 124.548 kb on - strand, within CA264_21295 at 124.710 kb on - strand, within CA264_21295 at 124.710 kb on - strand, within CA264_21295 at 124.772 kb on + strand, within CA264_21295 at 124.825 kb on - strand at 124.849 kb on + strand at 124.849 kb on + strand at 124.850 kb on - strand at 124.850 kb on - strand at 124.864 kb on - strand at 124.892 kb on - strand at 124.960 kb on - strand, within CA264_21300 at 125.135 kb on + strand, within CA264_21300 at 125.192 kb on - strand, within CA264_21300 at 125.386 kb on - strand at 125.493 kb on + strand at 125.493 kb on + strand at 125.497 kb on - strand at 125.499 kb on - strand at 125.501 kb on + strand at 125.502 kb on - strand at 125.502 kb on - strand at 125.502 kb on - strand at 125.656 kb on - strand, within CA264_21305 at 125.716 kb on - strand, within CA264_21305 at 125.754 kb on + strand, within CA264_21305 at 125.794 kb on - strand, within CA264_21305
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 123,491 - CA264_21285 0.41 -1.2 123,759 - -1.2 123,804 + +0.1 123,923 + CA264_21290 0.22 +1.2 123,923 + CA264_21290 0.22 -0.3 124,069 - CA264_21290 0.44 -0.7 124,077 + CA264_21290 0.46 -1.2 124,077 + CA264_21290 0.46 -1.8 124,077 + CA264_21290 0.46 -0.5 124,078 - CA264_21290 0.46 -0.1 124,144 + CA264_21290 0.56 -0.5 124,313 - CA264_21290 0.82 +0.4 124,431 + -0.5 124,449 + -0.3 124,450 - -0.0 124,548 - CA264_21295 0.23 -1.7 124,710 - CA264_21295 0.63 -0.4 124,710 - CA264_21295 0.63 -1.4 124,772 + CA264_21295 0.79 -0.0 124,825 - -0.8 124,849 + -0.5 124,849 + -1.2 124,850 - -1.2 124,850 - +0.2 124,864 - -1.8 124,892 - -0.8 124,960 - CA264_21300 0.16 -0.1 125,135 + CA264_21300 0.47 +2.2 125,192 - CA264_21300 0.57 -2.1 125,386 - -0.4 125,493 + -1.5 125,493 + +0.2 125,497 - -0.7 125,499 - +0.7 125,501 + -0.8 125,502 - -0.8 125,502 - -1.0 125,502 - -0.4 125,656 - CA264_21305 0.28 +2.7 125,716 - CA264_21305 0.46 -1.0 125,754 + CA264_21305 0.57 -0.2 125,794 - CA264_21305 0.69 -1.8
Or see this region's nucleotide sequence