Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20940 and CA264_20945 are separated by 330 nucleotides CA264_20945 and CA264_20950 are separated by 82 nucleotides CA264_20950 and CA264_20955 are separated by 455 nucleotides
CA264_20940: CA264_20940 - pyridine nucleotide-disulfide oxidoreductase, at 51,866 to 53,200
_20940
CA264_20945: CA264_20945 - hypothetical protein, at 53,531 to 53,812
_20945
CA264_20950: CA264_20950 - hypothetical protein, at 53,895 to 54,149
_20950
CA264_20955: CA264_20955 - hypothetical protein, at 54,605 to 55,042
_20955
Position (kb) 53
54 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 52.531 kb on - strand, within CA264_20940 at 52.531 kb on - strand, within CA264_20940 at 52.621 kb on - strand, within CA264_20940 at 52.681 kb on - strand, within CA264_20940 at 52.860 kb on - strand, within CA264_20940 at 52.900 kb on - strand, within CA264_20940 at 53.013 kb on - strand, within CA264_20940 at 53.114 kb on - strand at 53.185 kb on - strand at 53.190 kb on - strand at 53.190 kb on - strand at 53.199 kb on - strand at 53.233 kb on - strand at 53.247 kb on - strand at 53.251 kb on - strand at 53.281 kb on - strand at 53.281 kb on - strand at 53.326 kb on - strand at 53.369 kb on - strand at 53.400 kb on - strand at 53.546 kb on - strand at 53.546 kb on - strand at 53.566 kb on - strand, within CA264_20945 at 53.633 kb on - strand, within CA264_20945 at 53.633 kb on - strand, within CA264_20945 at 53.710 kb on - strand, within CA264_20945 at 53.845 kb on - strand at 53.845 kb on - strand at 53.868 kb on - strand at 53.903 kb on - strand at 53.903 kb on - strand at 53.916 kb on - strand at 53.995 kb on - strand, within CA264_20950 at 54.013 kb on - strand, within CA264_20950 at 54.054 kb on - strand, within CA264_20950 at 54.057 kb on - strand, within CA264_20950
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 52,531 - CA264_20940 0.50 -0.1 52,531 - CA264_20940 0.50 -1.1 52,621 - CA264_20940 0.57 +0.1 52,681 - CA264_20940 0.61 -0.2 52,860 - CA264_20940 0.74 +1.0 52,900 - CA264_20940 0.77 +0.2 53,013 - CA264_20940 0.86 -2.6 53,114 - -0.7 53,185 - +0.2 53,190 - +1.9 53,190 - +0.0 53,199 - +0.2 53,233 - +0.6 53,247 - +0.2 53,251 - +1.1 53,281 - +0.7 53,281 - -0.9 53,326 - +0.0 53,369 - +0.5 53,400 - +0.0 53,546 - -0.3 53,546 - +0.0 53,566 - CA264_20945 0.12 +1.2 53,633 - CA264_20945 0.36 +1.1 53,633 - CA264_20945 0.36 +0.1 53,710 - CA264_20945 0.63 +0.7 53,845 - -0.1 53,845 - -0.2 53,868 - -0.4 53,903 - -0.8 53,903 - -3.1 53,916 - -0.3 53,995 - CA264_20950 0.39 +0.1 54,013 - CA264_20950 0.46 +0.2 54,054 - CA264_20950 0.62 -2.1 54,057 - CA264_20950 0.64 +0.2
Or see this region's nucleotide sequence